RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
TPM4-202ENST00000344824 RGPD3A6NKT7 1758 aaPredicted RBP18.73■□□□□ 0.59
TPM4-202ENST00000344824 RGPD4Q7Z3J3 1758 aa18.73■□□□□ 0.59
TPM4-202ENST00000344824 BTAF1O14981 1849 aa18.73■□□□□ 0.59
TPM4-202ENST00000344824 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
TPM4-202ENST00000344824 DDX54Q8TDD1 881 aaKnown RBP18.73■□□□□ 0.59
TPM4-202ENST00000344824 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
TPM4-202ENST00000344824 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
TPM4-202ENST00000344824 PKD1L3Q7Z443 1732 aa18.7■□□□□ 0.58
TPM4-202ENST00000344824 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
TPM4-202ENST00000344824 AMER1Q5JTC6 1135 aaPredicted RBP18.7■□□□□ 0.58
TPM4-202ENST00000344824 PTF1AQ7RTS3 328 aa18.69■□□□□ 0.58
TPM4-202ENST00000344824 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
TPM4-202ENST00000344824 BCL9O00512 1426 aa18.68■□□□□ 0.58
TPM4-202ENST00000344824 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
TPM4-202ENST00000344824 CAMKK2Q96RR4 588 aa18.67■□□□□ 0.58
TPM4-202ENST00000344824 PARD3Q8TEW0 1356 aa18.67■□□□□ 0.58
TPM4-202ENST00000344824 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
TPM4-202ENST00000344824 KCNQ2O43526 872 aa18.66■□□□□ 0.58
TPM4-202ENST00000344824 BCL11BQ9C0K0 894 aaPredicted RBP18.66■□□□□ 0.58
TPM4-202ENST00000344824 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
TPM4-202ENST00000344824 EYA1Q99502 592 aa18.66■□□□□ 0.58
TPM4-202ENST00000344824 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
TPM4-202ENST00000344824 ANP32CO43423 234 aa18.64■□□□□ 0.57
TPM4-202ENST00000344824 NCAPD2Q15021 1401 aa18.64■□□□□ 0.57
TPM4-202ENST00000344824 ITGB4P16144 1822 aa18.63■□□□□ 0.57
TPM4-202ENST00000344824 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
TPM4-202ENST00000344824 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
TPM4-202ENST00000344824 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
TPM4-202ENST00000344824 MIER1Q8N108 512 aa18.62■□□□□ 0.57
TPM4-202ENST00000344824 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
TPM4-202ENST00000344824 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
TPM4-202ENST00000344824 NPC1L1Q9UHC9 1359 aa18.59■□□□□ 0.57
TPM4-202ENST00000344824 MTHFSP49914 203 aa18.59■□□□□ 0.57
TPM4-202ENST00000344824 PLSCR1O15162 318 aa18.58■□□□□ 0.57
TPM4-202ENST00000344824 NBPF14Q5TI25 921 aa18.58■□□□□ 0.57
TPM4-202ENST00000344824 SPG7Q9UQ90 795 aa18.58■□□□□ 0.57
TPM4-202ENST00000344824 VIRMAQ69YN4 1812 aaKnown RBP18.57■□□□□ 0.56
TPM4-202ENST00000344824 LY75O60449 1722 aa18.57■□□□□ 0.56
TPM4-202ENST00000344824 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
TPM4-202ENST00000344824 CYP27B1O15528 508 aa18.56■□□□□ 0.56
TPM4-202ENST00000344824 TXNRD1Q16881 649 aa18.56■□□□□ 0.56
TPM4-202ENST00000344824 AEBP1Q8IUX7 1158 aa18.56■□□□□ 0.56
TPM4-202ENST00000344824 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
TPM4-202ENST00000344824 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
TPM4-202ENST00000344824 IL13P35225 146 aa18.53■□□□□ 0.56
TPM4-202ENST00000344824 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
TPM4-202ENST00000344824 LRP5O75197 1615 aa18.53■□□□□ 0.56
TPM4-202ENST00000344824 DIAPH1O60610 1272 aaKnown RBP18.52■□□□□ 0.56
TPM4-202ENST00000344824 PAPPAQ13219 1627 aa18.52■□□□□ 0.56
TPM4-202ENST00000344824 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
TPM4-202ENST00000344824 TUBGCP6Q96RT7 1819 aa18.52■□□□□ 0.55
TPM4-202ENST00000344824 HMOX1P09601 288 aa18.51■□□□□ 0.55
TPM4-202ENST00000344824 MPRIPQ6WCQ1 1025 aa18.51■□□□□ 0.55
TPM4-202ENST00000344824 PROM2Q8N271 834 aa18.51■□□□□ 0.55
TPM4-202ENST00000344824 SRCAPQ6ZRS2 3230 aa18.51■□□□□ 0.55
TPM4-202ENST00000344824 ZNF530Q6P9A1 599 aaPredicted RBP18.5■□□□□ 0.55
TPM4-202ENST00000344824 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
TPM4-202ENST00000344824 C5P01031 1676 aa18.5■□□□□ 0.55
TPM4-202ENST00000344824 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
TPM4-202ENST00000344824 PHKG2P15735 406 aa18.49■□□□□ 0.55
TPM4-202ENST00000344824 PLEKHO1Q53GL0 409 aaPredicted RBP18.49■□□□□ 0.55
TPM4-202ENST00000344824 STK32BQ9NY57 414 aa18.49■□□□□ 0.55
TPM4-202ENST00000344824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.49■□□□□ 0.553e-8■■□□□ 13.5
TPM4-202ENST00000344824 CASZ1Q86V15 1759 aa18.49■□□□□ 0.55
TPM4-202ENST00000344824 CFAP53Q96M91 514 aa18.49■□□□□ 0.55
TPM4-202ENST00000344824 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
TPM4-202ENST00000344824 TAF1LQ8IZX4 1826 aa18.48■□□□□ 0.55
TPM4-202ENST00000344824 KDRP35968 1356 aa18.48■□□□□ 0.55
TPM4-202ENST00000344824 PLEKHG2Q9H7P9 1386 aa18.48■□□□□ 0.55
TPM4-202ENST00000344824 KCNQ4P56696 695 aa18.48■□□□□ 0.55
TPM4-202ENST00000344824 RALBP1Q15311 655 aa18.48■□□□□ 0.55
TPM4-202ENST00000344824 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
TPM4-202ENST00000344824 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
TPM4-202ENST00000344824 AMOTQ4VCS5 1084 aa18.46■□□□□ 0.55
TPM4-202ENST00000344824 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
TPM4-202ENST00000344824 CCNL1Q9UK58 526 aaPredicted RBP18.46■□□□□ 0.55
TPM4-202ENST00000344824 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
TPM4-202ENST00000344824 LRRC4BQ9NT99 713 aa18.45■□□□□ 0.54
TPM4-202ENST00000344824 QSER1Q2KHR3 1735 aa18.44■□□□□ 0.54
TPM4-202ENST00000344824 MYBBP1AQ9BQG0 1328 aaKnown RBP18.44■□□□□ 0.54
TPM4-202ENST00000344824 NKX1-1Q15270 411 aaPredicted RBP18.44■□□□□ 0.54
TPM4-202ENST00000344824 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
TPM4-202ENST00000344824 HSP90AB1P08238 724 aaKnown RBP18.43■□□□□ 0.54
TPM4-202ENST00000344824 SLC27A3Q5K4L6 730 aa18.43■□□□□ 0.54
TPM4-202ENST00000344824 KDM6AO15550 1401 aaPredicted RBP18.43■□□□□ 0.54
TPM4-202ENST00000344824 ZNF827Q17R98 1081 aa18.42■□□□□ 0.54
TPM4-202ENST00000344824 PIGBQ92521 554 aa18.42■□□□□ 0.54
TPM4-202ENST00000344824 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
TPM4-202ENST00000344824 CCDC184Q52MB2 194 aa18.4■□□□□ 0.54
TPM4-202ENST00000344824 DCAF5Q96JK2 942 aa18.4■□□□□ 0.54
TPM4-202ENST00000344824 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
TPM4-202ENST00000344824 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
TPM4-202ENST00000344824 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
TPM4-202ENST00000344824 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
TPM4-202ENST00000344824 PDGFDQ9GZP0 370 aaPredicted RBP18.4■□□□□ 0.54
TPM4-202ENST00000344824 MRS2Q9HD23 443 aa18.39■□□□□ 0.53
TPM4-202ENST00000344824 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
TPM4-202ENST00000344824 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
TPM4-202ENST00000344824 CABP4P57796 275 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms