RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 K7ELQ4 463 aaPredicted RBP16.47■□□□□ 0.23
SNX21-202ENST00000344780 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
SNX21-202ENST00000344780 NLRP6P59044 892 aa16.46■□□□□ 0.23
SNX21-202ENST00000344780 ARHGAP45Q92619 1136 aa16.46■□□□□ 0.23
SNX21-202ENST00000344780 EDC4Q6P2E9 1401 aaKnown RBP16.46■□□□□ 0.23
SNX21-202ENST00000344780 GSPT1P15170 499 aaKnown RBP16.46■□□□□ 0.23
SNX21-202ENST00000344780 TSHZ3Q63HK5 1081 aa16.46■□□□□ 0.23
SNX21-202ENST00000344780 G2E3Q7L622 706 aa16.46■□□□□ 0.23
SNX21-202ENST00000344780 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
SNX21-202ENST00000344780 KIF2CQ99661 725 aa16.45■□□□□ 0.22
SNX21-202ENST00000344780 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
SNX21-202ENST00000344780 EID1Q9Y6B2 187 aa16.45■□□□□ 0.22
SNX21-202ENST00000344780 PLEKHM2Q8IWE5 1019 aa16.45■□□□□ 0.22
SNX21-202ENST00000344780 MEIS3Q99687 375 aa16.45■□□□□ 0.22
SNX21-202ENST00000344780 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
SNX21-202ENST00000344780 GRPEL1Q9HAV7 217 aa16.45■□□□□ 0.22
SNX21-202ENST00000344780 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
SNX21-202ENST00000344780 CLCN1P35523 988 aa16.44■□□□□ 0.22
SNX21-202ENST00000344780 MTHFSDQ2M296 383 aaKnown RBP16.44■□□□□ 0.22
SNX21-202ENST00000344780 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
SNX21-202ENST00000344780 KIAA1211Q6ZU35 1233 aa16.44■□□□□ 0.22
SNX21-202ENST00000344780 ZNF853P0CG23 659 aa16.44■□□□□ 0.22
SNX21-202ENST00000344780 NOL8Q76FK4 1167 aaKnown RBP16.44■□□□□ 0.22
SNX21-202ENST00000344780 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
SNX21-202ENST00000344780 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
SNX21-202ENST00000344780 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
SNX21-202ENST00000344780 ABCC4O15439 1325 aa16.43■□□□□ 0.22
SNX21-202ENST00000344780 SNX21Q969T3 373 aa16.43■□□□□ 0.22
SNX21-202ENST00000344780 MAP3K19Q56UN5 1328 aa16.43■□□□□ 0.22
SNX21-202ENST00000344780 MRE11P49959 708 aa16.43■□□□□ 0.22
SNX21-202ENST00000344780 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
SNX21-202ENST00000344780 ESPNB1AK53 854 aa16.42■□□□□ 0.22
SNX21-202ENST00000344780 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
SNX21-202ENST00000344780 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
SNX21-202ENST00000344780 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
SNX21-202ENST00000344780 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
SNX21-202ENST00000344780 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
SNX21-202ENST00000344780 GAS2L3Q86XJ1 694 aa16.41■□□□□ 0.22
SNX21-202ENST00000344780 DIP2BQ9P265 1576 aa16.41■□□□□ 0.22
SNX21-202ENST00000344780 TMEM2Q9UHN6 1383 aa16.41■□□□□ 0.22
SNX21-202ENST00000344780 MCTP1Q6DN14 999 aa16.41■□□□□ 0.22
SNX21-202ENST00000344780 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
SNX21-202ENST00000344780 BBXQ8WY36 941 aaPredicted RBP16.4■□□□□ 0.22
SNX21-202ENST00000344780 DCTPP1Q9H773 170 aa16.4■□□□□ 0.22
SNX21-202ENST00000344780 ATP7BP35670 1465 aa16.4■□□□□ 0.22
SNX21-202ENST00000344780 BRPF1P55201 1214 aaPredicted RBP16.4■□□□□ 0.22
SNX21-202ENST00000344780 RAB3GAP1Q15042 981 aa16.4■□□□□ 0.22
SNX21-202ENST00000344780 EXOC6BQ9Y2D4 811 aa16.4■□□□□ 0.22
SNX21-202ENST00000344780 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
SNX21-202ENST00000344780 SDSP20132 328 aa16.39■□□□□ 0.21
SNX21-202ENST00000344780 TTC22Q5TAA0 569 aa16.39■□□□□ 0.21
SNX21-202ENST00000344780 ABTB2Q8N961 1025 aa16.39■□□□□ 0.21
SNX21-202ENST00000344780 EYA1Q99502 592 aa16.39■□□□□ 0.21
SNX21-202ENST00000344780 MED14O60244 1454 aa16.39■□□□□ 0.21
SNX21-202ENST00000344780 CASC1Q6TDU7 716 aa16.39■□□□□ 0.21
SNX21-202ENST00000344780 EIF2S2P20042 333 aaKnown RBP16.39■□□□□ 0.21
SNX21-202ENST00000344780 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
SNX21-202ENST00000344780 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
SNX21-202ENST00000344780 PRDM4Q9UKN5 801 aa16.39■□□□□ 0.21
SNX21-202ENST00000344780 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
SNX21-202ENST00000344780 PKP1Q13835 747 aa16.38■□□□□ 0.21
SNX21-202ENST00000344780 INTS3Q68E01 1043 aaKnown RBP16.38■□□□□ 0.21
SNX21-202ENST00000344780 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
SNX21-202ENST00000344780 ANKRD44Q8N8A2 993 aa16.37■□□□□ 0.21
SNX21-202ENST00000344780 VGLL3A8MV65 326 aa16.37■□□□□ 0.21
SNX21-202ENST00000344780 FKBP5Q13451 457 aaPredicted RBP16.37■□□□□ 0.21
SNX21-202ENST00000344780 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
SNX21-202ENST00000344780 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
SNX21-202ENST00000344780 MSH6P52701 1360 aa16.37■□□□□ 0.21
SNX21-202ENST00000344780 PTCH1Q13635 1447 aa16.37■□□□□ 0.21
SNX21-202ENST00000344780 CHL1O00533 1208 aa16.36■□□□□ 0.21
SNX21-202ENST00000344780 KCNA6P17658 529 aa16.36■□□□□ 0.21
SNX21-202ENST00000344780 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
SNX21-202ENST00000344780 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
SNX21-202ENST00000344780 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
SNX21-202ENST00000344780 TRIM6-TRIM34B2RNG4 842 aa16.36■□□□□ 0.21
SNX21-202ENST00000344780 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
SNX21-202ENST00000344780 ANXA1P04083 346 aa16.35■□□□□ 0.21
SNX21-202ENST00000344780 RPAP2Q8IXW5 612 aaPredicted RBP16.35■□□□□ 0.21
SNX21-202ENST00000344780 DDIT3P35638 169 aa16.34■□□□□ 0.21
SNX21-202ENST00000344780 RABEP1Q15276 862 aa16.34■□□□□ 0.21
SNX21-202ENST00000344780 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
SNX21-202ENST00000344780 USP26Q9BXU7 913 aa16.34■□□□□ 0.21
SNX21-202ENST00000344780 SETD1BQ9UPS6 1966 aaKnown RBP16.34■□□□□ 0.21
SNX21-202ENST00000344780 BAG4O95429 457 aaKnown RBP16.34■□□□□ 0.21
SNX21-202ENST00000344780 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
SNX21-202ENST00000344780 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
SNX21-202ENST00000344780 PDCL3Q9H2J4 239 aa16.34■□□□□ 0.21
SNX21-202ENST00000344780 SKOR2Q2VWA4 1001 aaPredicted RBP16.33■□□□□ 0.21
SNX21-202ENST00000344780 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
SNX21-202ENST00000344780 ST18O60284 1047 aa16.33■□□□□ 0.2
SNX21-202ENST00000344780 HMMRO75330 724 aa16.33■□□□□ 0.2
SNX21-202ENST00000344780 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.2
SNX21-202ENST00000344780 IGSF3O75054 1194 aa16.32■□□□□ 0.2
SNX21-202ENST00000344780 SPATA31D1Q6ZQQ2 1576 aa16.32■□□□□ 0.2
SNX21-202ENST00000344780 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
SNX21-202ENST00000344780 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
SNX21-202ENST00000344780 NEK4P51957 841 aa16.32■□□□□ 0.2
SNX21-202ENST00000344780 ADAMTS13Q76LX8 1427 aa16.32■□□□□ 0.2
SNX21-202ENST00000344780 PRPF40AO75400 957 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms