RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 HSP90AB2PQ58FF8 381 aa19.97■□□□□ 0.79
HMGN3-202ENST00000344726 USHBP1Q8N6Y0 703 aa19.97■□□□□ 0.79
HMGN3-202ENST00000344726 EMILIN1Q9Y6C2 1016 aa19.97■□□□□ 0.79
HMGN3-202ENST00000344726 INSRP06213 1382 aa19.95■□□□□ 0.79
HMGN3-202ENST00000344726 FLT4P35916 1363 aa19.95■□□□□ 0.79
HMGN3-202ENST00000344726 NBPF14Q5TI25 921 aa19.95■□□□□ 0.78
HMGN3-202ENST00000344726 DOT1LQ8TEK3 1739 aa19.95■□□□□ 0.78
HMGN3-202ENST00000344726 CGNL1Q0VF96 1302 aa19.95■□□□□ 0.78
HMGN3-202ENST00000344726 CASZ1Q86V15 1759 aa19.95■□□□□ 0.78
HMGN3-202ENST00000344726 TXNRD1Q16881 649 aa19.94■□□□□ 0.78
HMGN3-202ENST00000344726 PANK3Q9H999 370 aa19.94■□□□□ 0.78
HMGN3-202ENST00000344726 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
HMGN3-202ENST00000344726 KIF24Q5T7B8 1368 aa19.94■□□□□ 0.78
HMGN3-202ENST00000344726 DDX54Q8TDD1 881 aaKnown RBP19.93■□□□□ 0.78
HMGN3-202ENST00000344726 PDGFDQ9GZP0 370 aaPredicted RBP19.92■□□□□ 0.78
HMGN3-202ENST00000344726 SMG6Q86US8 1419 aaKnown RBP19.92■□□□□ 0.78
HMGN3-202ENST00000344726 KIF7Q2M1P5 1343 aa19.9■□□□□ 0.78
HMGN3-202ENST00000344726 NSD2O96028 1365 aa19.9■□□□□ 0.78
HMGN3-202ENST00000344726 NCAPD2Q15021 1401 aa19.89■□□□□ 0.77
HMGN3-202ENST00000344726 ZCRB1Q8TBF4 217 aaKnown RBP19.89■□□□□ 0.77
HMGN3-202ENST00000344726 RNF216Q9NWF9 866 aaPredicted RBP19.89■□□□□ 0.77
HMGN3-202ENST00000344726 POLKQ9UBT6 870 aa19.87■□□□□ 0.77
HMGN3-202ENST00000344726 PKD1L3Q7Z443 1732 aa19.87■□□□□ 0.77
HMGN3-202ENST00000344726 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
HMGN3-202ENST00000344726 PPM1GO15355 546 aaPredicted RBP19.86■□□□□ 0.77
HMGN3-202ENST00000344726 LRRC4BQ9NT99 713 aa19.86■□□□□ 0.77
HMGN3-202ENST00000344726 TNNT2P45379 298 aaPredicted RBP19.85■□□□□ 0.77
HMGN3-202ENST00000344726 TOGARAM1Q9Y4F4 1720 aa19.85■□□□□ 0.77
HMGN3-202ENST00000344726 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
HMGN3-202ENST00000344726 SLC15A2Q16348 729 aa19.84■□□□□ 0.77
HMGN3-202ENST00000344726 RAPGEF4Q8WZA2 1011 aa19.84■□□□□ 0.77
HMGN3-202ENST00000344726 LY75O60449 1722 aa19.84■□□□□ 0.77
HMGN3-202ENST00000344726 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
HMGN3-202ENST00000344726 ZNF827Q17R98 1081 aa19.82■□□□□ 0.76
HMGN3-202ENST00000344726 SYTL4Q96C24 671 aaPredicted RBP19.82■□□□□ 0.76
HMGN3-202ENST00000344726 STK32BQ9NY57 414 aa19.82■□□□□ 0.76
HMGN3-202ENST00000344726 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
HMGN3-202ENST00000344726 HOXD11P31277 338 aaPredicted RBP19.81■□□□□ 0.76
HMGN3-202ENST00000344726 EYA1Q99502 592 aa19.81■□□□□ 0.76
HMGN3-202ENST00000344726 SPON1Q9HCB6 807 aa19.81■□□□□ 0.76
HMGN3-202ENST00000344726 CYP27B1O15528 508 aa19.8■□□□□ 0.76
HMGN3-202ENST00000344726 KCNQ4P56696 695 aa19.8■□□□□ 0.76
HMGN3-202ENST00000344726 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
HMGN3-202ENST00000344726 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
HMGN3-202ENST00000344726 TUBGCP6Q96RT7 1819 aa19.79■□□□□ 0.76
HMGN3-202ENST00000344726 ZBTB7AO95365 584 aa19.79■□□□□ 0.76
HMGN3-202ENST00000344726 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
HMGN3-202ENST00000344726 KNSTRNQ9Y448 316 aa19.79■□□□□ 0.76
HMGN3-202ENST00000344726 AMER1Q5JTC6 1135 aaPredicted RBP19.78■□□□□ 0.76
HMGN3-202ENST00000344726 AKT1S1Q96B36 256 aa19.77■□□□□ 0.76
HMGN3-202ENST00000344726 ITGB4P16144 1822 aa19.76■□□□□ 0.75
HMGN3-202ENST00000344726 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
HMGN3-202ENST00000344726 PTGER2P43116 358 aa19.76■□□□□ 0.75
HMGN3-202ENST00000344726 MORC1Q86VD1 984 aa19.76■□□□□ 0.75
HMGN3-202ENST00000344726 QSER1Q2KHR3 1735 aa19.76■□□□□ 0.75
HMGN3-202ENST00000344726 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
HMGN3-202ENST00000344726 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
HMGN3-202ENST00000344726 IGSF1Q8N6C5 1336 aa19.74■□□□□ 0.75
HMGN3-202ENST00000344726 SGIP1Q9BQI5 828 aa19.73■□□□□ 0.75
HMGN3-202ENST00000344726 C5P01031 1676 aa19.71■□□□□ 0.75
HMGN3-202ENST00000344726 NKX1-1Q15270 411 aaPredicted RBP19.71■□□□□ 0.75
HMGN3-202ENST00000344726 PPP1R1BQ9UD71 204 aaPredicted RBP19.71■□□□□ 0.75
HMGN3-202ENST00000344726 PNPLA7Q6ZV29 1317 aa19.71■□□□□ 0.75
HMGN3-202ENST00000344726 MPRIPQ6WCQ1 1025 aa19.7■□□□□ 0.74
HMGN3-202ENST00000344726 MTFR1LQ9H019 292 aa19.7■□□□□ 0.74
HMGN3-202ENST00000344726 CCNL1Q9UK58 526 aaPredicted RBP19.7■□□□□ 0.74
HMGN3-202ENST00000344726 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
HMGN3-202ENST00000344726 COL24A1Q17RW2 1714 aa19.69■□□□□ 0.74
HMGN3-202ENST00000344726 SPG7Q9UQ90 795 aa19.69■□□□□ 0.74
HMGN3-202ENST00000344726 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
HMGN3-202ENST00000344726 PHKG2P15735 406 aa19.68■□□□□ 0.74
HMGN3-202ENST00000344726 CC2D1BQ5T0F9 858 aaKnown RBP19.68■□□□□ 0.74
HMGN3-202ENST00000344726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.745e-8■□□□□ 10.4
HMGN3-202ENST00000344726 AEBP1Q8IUX7 1158 aa19.67■□□□□ 0.74
HMGN3-202ENST00000344726 PIGBQ92521 554 aa19.67■□□□□ 0.74
HMGN3-202ENST00000344726 PLEKHG2Q9H7P9 1386 aa19.65■□□□□ 0.74
HMGN3-202ENST00000344726 IL13P35225 146 aa19.64■□□□□ 0.73
HMGN3-202ENST00000344726 IFNL2Q8IZJ0 200 aa19.64■□□□□ 0.73
HMGN3-202ENST00000344726 TFCP2L1Q9NZI6 479 aa19.64■□□□□ 0.73
HMGN3-202ENST00000344726 NPC1L1Q9UHC9 1359 aa19.64■□□□□ 0.73
HMGN3-202ENST00000344726 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
HMGN3-202ENST00000344726 MTHFSP49914 203 aa19.63■□□□□ 0.73
HMGN3-202ENST00000344726 KDM6AO15550 1401 aaPredicted RBP19.62■□□□□ 0.73
HMGN3-202ENST00000344726 KDRP35968 1356 aa19.62■□□□□ 0.73
HMGN3-202ENST00000344726 DCAF8L1A6NGE4 600 aa19.62■□□□□ 0.73
HMGN3-202ENST00000344726 CNGB1Q14028 1251 aaPredicted RBP19.62■□□□□ 0.73
HMGN3-202ENST00000344726 FHDC1Q9C0D6 1143 aaPredicted RBP19.62■□□□□ 0.73
HMGN3-202ENST00000344726 AMIGO3Q86WK7 504 aa19.61■□□□□ 0.73
HMGN3-202ENST00000344726 COL23A1Q86Y22 540 aaPredicted RBP19.61■□□□□ 0.73
HMGN3-202ENST00000344726 ARXQ96QS3 562 aa19.6■□□□□ 0.73
HMGN3-202ENST00000344726 ASAP1Q9ULH1 1129 aa19.6■□□□□ 0.73
HMGN3-202ENST00000344726 UTRNP46939 3433 aa19.6■□□□□ 0.73
HMGN3-202ENST00000344726 SULT6B1Q6IMI4 303 aa19.59■□□□□ 0.73
HMGN3-202ENST00000344726 SLC16A10Q8TF71 515 aa19.59■□□□□ 0.73
HMGN3-202ENST00000344726 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
HMGN3-202ENST00000344726 TMOD3Q9NYL9 352 aa19.59■□□□□ 0.73
HMGN3-202ENST00000344726 UBR3Q6ZT12 1888 aa19.58■□□□□ 0.73
HMGN3-202ENST00000344726 SMARCC1Q92922 1105 aaPredicted RBP19.58■□□□□ 0.72
HMGN3-202ENST00000344726 ATG3Q9NT62 314 aa19.58■□□□□ 0.72
HMGN3-202ENST00000344726 COL3A1P02461 1466 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms