RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 MEGF6O75095 1541 aa27.49■■□□□ 1.99
CEACAM3-201ENST00000344550 NCAPD2Q15021 1401 aa27.49■■□□□ 1.99
CEACAM3-201ENST00000344550 KNSTRNQ9Y448 316 aa27.48■■□□□ 1.99
CEACAM3-201ENST00000344550 RGPD2P0DJD1 1756 aa27.48■■□□□ 1.99
CEACAM3-201ENST00000344550 PLEKHG2Q9H7P9 1386 aa27.47■■□□□ 1.99
CEACAM3-201ENST00000344550 PPM1GO15355 546 aaPredicted RBP27.46■■□□□ 1.99
CEACAM3-201ENST00000344550 ACSBG1Q96GR2 724 aa27.46■■□□□ 1.99
CEACAM3-201ENST00000344550 MAP2P11137 1827 aaKnown RBP27.46■■□□□ 1.99
CEACAM3-201ENST00000344550 KIF7Q2M1P5 1343 aa27.44■■□□□ 1.98
CEACAM3-201ENST00000344550 PCDH11XQ9BZA7 1347 aa27.43■■□□□ 1.98
CEACAM3-201ENST00000344550 PCDH11YQ9BZA8 1340 aa27.43■■□□□ 1.98
CEACAM3-201ENST00000344550 USHBP1Q8N6Y0 703 aa27.43■■□□□ 1.98
CEACAM3-201ENST00000344550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.43■■□□□ 1.98
CEACAM3-201ENST00000344550 SLC27A3Q5K4L6 730 aa27.41■■□□□ 1.98
CEACAM3-201ENST00000344550 BTAF1O14981 1849 aa27.4■■□□□ 1.98
CEACAM3-201ENST00000344550 HMGB2P26583 209 aaKnown RBP27.4■■□□□ 1.98
CEACAM3-201ENST00000344550 MORC1Q86VD1 984 aa27.4■■□□□ 1.98
CEACAM3-201ENST00000344550 KAT6BQ8WYB5 2073 aa27.39■■□□□ 1.98
CEACAM3-201ENST00000344550 SHANK3Q9BYB0 1731 aa27.39■■□□□ 1.98
CEACAM3-201ENST00000344550 EYA1Q99502 592 aa27.39■■□□□ 1.98
CEACAM3-201ENST00000344550 STK32BQ9NY57 414 aa27.39■■□□□ 1.98
CEACAM3-201ENST00000344550 PRIM1P49642 420 aaKnown RBP27.38■■□□□ 1.97
CEACAM3-201ENST00000344550 TNNT2P45379 298 aaPredicted RBP27.37■■□□□ 1.97
CEACAM3-201ENST00000344550 SLC15A2Q16348 729 aa27.37■■□□□ 1.97
CEACAM3-201ENST00000344550 AMER1Q5JTC6 1135 aaPredicted RBP27.37■■□□□ 1.97
CEACAM3-201ENST00000344550 ANO8Q9HCE9 1232 aaPredicted RBP27.37■■□□□ 1.97
CEACAM3-201ENST00000344550 SPG7Q9UQ90 795 aa27.37■■□□□ 1.97
CEACAM3-201ENST00000344550 SPON1Q9HCB6 807 aa27.36■■□□□ 1.97
CEACAM3-201ENST00000344550 EIF4A2Q14240 407 aaKnown RBP27.35■■□□□ 1.97
CEACAM3-201ENST00000344550 SYTL4Q96C24 671 aaPredicted RBP27.34■■□□□ 1.97
CEACAM3-201ENST00000344550 PER1O15534 1290 aaPredicted RBP27.33■■□□□ 1.97
CEACAM3-201ENST00000344550 NKX1-1Q15270 411 aaPredicted RBP27.33■■□□□ 1.97
CEACAM3-201ENST00000344550 PKD1L3Q7Z443 1732 aa27.33■■□□□ 1.96
CEACAM3-201ENST00000344550 CYP27B1O15528 508 aa27.32■■□□□ 1.96
CEACAM3-201ENST00000344550 DOT1LQ8TEK3 1739 aa27.31■■□□□ 1.96
CEACAM3-201ENST00000344550 IGSF1Q8N6C5 1336 aa27.31■■□□□ 1.96
CEACAM3-201ENST00000344550 NPC1L1Q9UHC9 1359 aa27.31■■□□□ 1.96
CEACAM3-201ENST00000344550 PAPPAQ13219 1627 aa27.29■■□□□ 1.96
CEACAM3-201ENST00000344550 LRRC4BQ9NT99 713 aa27.28■■□□□ 1.96
CEACAM3-201ENST00000344550 CASZ1Q86V15 1759 aa27.27■■□□□ 1.96
CEACAM3-201ENST00000344550 IFNL2Q8IZJ0 200 aa27.26■■□□□ 1.95
CEACAM3-201ENST00000344550 LY75O60449 1722 aa27.24■■□□□ 1.95
CEACAM3-201ENST00000344550 SMARCC1Q92922 1105 aaPredicted RBP27.24■■□□□ 1.95
CEACAM3-201ENST00000344550 AKT1S1Q96B36 256 aa27.24■■□□□ 1.95
CEACAM3-201ENST00000344550 AMOTQ4VCS5 1084 aa27.23■■□□□ 1.95
CEACAM3-201ENST00000344550 MTFR1LQ9H019 292 aa27.23■■□□□ 1.95
CEACAM3-201ENST00000344550 HSP90AB1P08238 724 aaKnown RBP27.21■■□□□ 1.95
CEACAM3-201ENST00000344550 PHKG2P15735 406 aa27.21■■□□□ 1.95
CEACAM3-201ENST00000344550 SLC16A10Q8TF71 515 aa27.21■■□□□ 1.95
CEACAM3-201ENST00000344550 PPP1R1BQ9UD71 204 aaPredicted RBP27.21■■□□□ 1.95
CEACAM3-201ENST00000344550 CCNL1Q9UK58 526 aaPredicted RBP27.21■■□□□ 1.95
CEACAM3-201ENST00000344550 PLEKHO1Q53GL0 409 aaPredicted RBP27.2■■□□□ 1.94
CEACAM3-201ENST00000344550 MPRIPQ6WCQ1 1025 aa27.2■■□□□ 1.94
CEACAM3-201ENST00000344550 KDRP35968 1356 aa27.2■■□□□ 1.94
CEACAM3-201ENST00000344550 IL13P35225 146 aa27.19■■□□□ 1.94
CEACAM3-201ENST00000344550 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
CEACAM3-201ENST00000344550 PDGFDQ9GZP0 370 aaPredicted RBP27.18■■□□□ 1.94
CEACAM3-201ENST00000344550 QSER1Q2KHR3 1735 aa27.17■■□□□ 1.94
CEACAM3-201ENST00000344550 MTHFSP49914 203 aa27.17■■□□□ 1.94
CEACAM3-201ENST00000344550 ZBTB7AO95365 584 aa27.16■■□□□ 1.94
CEACAM3-201ENST00000344550 PIGBQ92521 554 aa27.16■■□□□ 1.94
CEACAM3-201ENST00000344550 PALLDQ8WX93 1383 aa27.16■■□□□ 1.94
CEACAM3-201ENST00000344550 ERVV-2B6SEH9 535 aa27.15■■□□□ 1.94
CEACAM3-201ENST00000344550 PTGER2P43116 358 aa27.15■■□□□ 1.94
CEACAM3-201ENST00000344550 DCAF5Q96JK2 942 aa27.15■■□□□ 1.94
CEACAM3-201ENST00000344550 TMOD3Q9NYL9 352 aa27.15■■□□□ 1.94
CEACAM3-201ENST00000344550 TFCP2L1Q9NZI6 479 aa27.15■■□□□ 1.94
CEACAM3-201ENST00000344550 CC2D1BQ5T0F9 858 aaKnown RBP27.14■■□□□ 1.94
CEACAM3-201ENST00000344550 ITGB4P16144 1822 aa27.13■■□□□ 1.93
CEACAM3-201ENST00000344550 TOGARAM1Q9Y4F4 1720 aa27.13■■□□□ 1.93
CEACAM3-201ENST00000344550 SULT6B1Q6IMI4 303 aa27.13■■□□□ 1.93
CEACAM3-201ENST00000344550 SGIP1Q9BQI5 828 aa27.11■■□□□ 1.93
CEACAM3-201ENST00000344550 FLAD1Q8NFF5 587 aa27.1■■□□□ 1.93
CEACAM3-201ENST00000344550 ATF5Q9Y2D1 282 aaPredicted RBP27.1■■□□□ 1.93
CEACAM3-201ENST00000344550 PNPLA7Q6ZV29 1317 aa27.1■■□□□ 1.93
CEACAM3-201ENST00000344550 DIAPH1O60610 1272 aaKnown RBP27.09■■□□□ 1.93
CEACAM3-201ENST00000344550 ZNF530Q6P9A1 599 aaPredicted RBP27.09■■□□□ 1.93
CEACAM3-201ENST00000344550 KCNQ4P56696 695 aa27.08■■□□□ 1.93
CEACAM3-201ENST00000344550 C1orf141Q5JVX7 400 aa27.08■■□□□ 1.93
CEACAM3-201ENST00000344550 AEBP1Q8IUX7 1158 aa27.08■■□□□ 1.93
CEACAM3-201ENST00000344550 LOC102724428A0A0B4J2F2 783 aa27.05■■□□□ 1.92
CEACAM3-201ENST00000344550 DCAF8L1A6NGE4 600 aa27.05■■□□□ 1.92
CEACAM3-201ENST00000344550 SIK1P57059 783 aa27.05■■□□□ 1.92
CEACAM3-201ENST00000344550 C5P01031 1676 aa27.05■■□□□ 1.92
CEACAM3-201ENST00000344550 MAP3K5Q99683 1374 aa27.04■■□□□ 1.92
CEACAM3-201ENST00000344550 ARXQ96QS3 562 aa27.03■■□□□ 1.92
CEACAM3-201ENST00000344550 POLD1P28340 1107 aa27.02■■□□□ 1.92
CEACAM3-201ENST00000344550 AKAP4Q5JQC9 854 aa27.02■■□□□ 1.92
CEACAM3-201ENST00000344550 ATG3Q9NT62 314 aa27.02■■□□□ 1.92
CEACAM3-201ENST00000344550 ASAP1Q9ULH1 1129 aa27.02■■□□□ 1.92
CEACAM3-201ENST00000344550 COL24A1Q17RW2 1714 aa27.02■■□□□ 1.92
CEACAM3-201ENST00000344550 CABP4P57796 275 aa27.01■■□□□ 1.91
CEACAM3-201ENST00000344550 TAF1LQ8IZX4 1826 aa27.01■■□□□ 1.91
CEACAM3-201ENST00000344550 KDM6AO15550 1401 aaPredicted RBP27■■□□□ 1.91
CEACAM3-201ENST00000344550 COL23A1Q86Y22 540 aaPredicted RBP26.99■■□□□ 1.91
CEACAM3-201ENST00000344550 AK7Q96M32 723 aa26.99■■□□□ 1.91
CEACAM3-201ENST00000344550 CFAP53Q96M91 514 aa26.99■■□□□ 1.91
CEACAM3-201ENST00000344550 ZNF831Q5JPB2 1677 aa26.98■■□□□ 1.91
CEACAM3-201ENST00000344550 TUBGCP6Q96RT7 1819 aa26.98■■□□□ 1.91
CEACAM3-201ENST00000344550 COL3A1P02461 1466 aaPredicted RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms