RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 MAPK8IP3Q9UPT6 1336 aa31.03■■■□□ 2.56
NR6A1-201ENST00000344523 BARGINQ6ZT62 677 aa31.03■■■□□ 2.56
NR6A1-201ENST00000344523 APAF1O14727 1248 aa31.02■■■□□ 2.56
NR6A1-201ENST00000344523 RRP7AQ9Y3A4 280 aaKnown RBP31.02■■■□□ 2.56
NR6A1-201ENST00000344523 NEFMP07197 916 aa31.01■■■□□ 2.56
NR6A1-201ENST00000344523 MTHFSDQ2M296 383 aaKnown RBP31.01■■■□□ 2.56
NR6A1-201ENST00000344523 GLI3P10071 1580 aa31.01■■■□□ 2.55
NR6A1-201ENST00000344523 NEUROD2Q15784 382 aa31.01■■■□□ 2.55
NR6A1-201ENST00000344523 DISP2A7MBM2 1401 aa31■■■□□ 2.55
NR6A1-201ENST00000344523 PLEKHO1Q53GL0 409 aaPredicted RBP30.99■■■□□ 2.55
NR6A1-201ENST00000344523 SALL2Q9Y467 1007 aaPredicted RBP30.99■■■□□ 2.55
NR6A1-201ENST00000344523 OVOS2A0A0G2JMS6 1433 aa30.98■■■□□ 2.55
NR6A1-201ENST00000344523 RBM6P78332 1123 aaKnown RBP30.98■■■□□ 2.55
NR6A1-201ENST00000344523 ZCRB1Q8TBF4 217 aaKnown RBP30.98■■■□□ 2.55
NR6A1-201ENST00000344523 RXRBP28702 533 aa30.96■■■□□ 2.55
NR6A1-201ENST00000344523 DDX54Q8TDD1 881 aaKnown RBP30.96■■■□□ 2.55
NR6A1-201ENST00000344523 CDCA7Q9BWT1 371 aaPredicted RBP30.96■■■□□ 2.55
NR6A1-201ENST00000344523 EXOC5O00471 708 aa30.95■■■□□ 2.55
NR6A1-201ENST00000344523 AMOTQ4VCS5 1084 aa30.95■■■□□ 2.55
NR6A1-201ENST00000344523 ZNF530Q6P9A1 599 aaPredicted RBP30.95■■■□□ 2.55
NR6A1-201ENST00000344523 SPG7Q9UQ90 795 aa30.95■■■□□ 2.55
NR6A1-201ENST00000344523 TMPOP42166 694 aaKnown RBP30.94■■■□□ 2.54
NR6A1-201ENST00000344523 DDB1Q16531 1140 aa30.94■■■□□ 2.54
NR6A1-201ENST00000344523 SEPT12Q8IYM1 358 aa30.94■■■□□ 2.54
NR6A1-201ENST00000344523 YTHDC1Q96MU7 727 aaKnown RBP30.94■■■□□ 2.54
NR6A1-201ENST00000344523 NFE2L2Q16236 605 aa30.93■■■□□ 2.54
NR6A1-201ENST00000344523 ONECUT3O60422 494 aaPredicted RBP30.92■■■□□ 2.54
NR6A1-201ENST00000344523 CYP27B1O15528 508 aa30.91■■■□□ 2.54
NR6A1-201ENST00000344523 RIPK4P57078 832 aa30.91■■■□□ 2.54
NR6A1-201ENST00000344523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.91■■■□□ 2.541e-7■■■□□ 18.9
NR6A1-201ENST00000344523 GAS2L2Q8NHY3 880 aa30.91■■■□□ 2.54
NR6A1-201ENST00000344523 HNRNPUQ00839 825 aaKnown RBP eCLIP30.89■■■□□ 2.54
NR6A1-201ENST00000344523 PARP4Q9UKK3 1724 aaKnown RBP30.88■■■□□ 2.53
NR6A1-201ENST00000344523 C1orf141Q5JVX7 400 aa30.87■■■□□ 2.53
NR6A1-201ENST00000344523 PHKG2P15735 406 aa30.87■■■□□ 2.53
NR6A1-201ENST00000344523 PCDH11XQ9BZA7 1347 aa30.86■■■□□ 2.53
NR6A1-201ENST00000344523 PCDH11YQ9BZA8 1340 aa30.86■■■□□ 2.53
NR6A1-201ENST00000344523 WNK3Q9BYP7 1800 aa30.86■■■□□ 2.53
NR6A1-201ENST00000344523 DCTN1Q14203 1278 aa30.86■■■□□ 2.53
NR6A1-201ENST00000344523 IFNL2Q8IZJ0 200 aa30.85■■■□□ 2.53
NR6A1-201ENST00000344523 PDE3BQ13370 1112 aa30.84■■■□□ 2.53
NR6A1-201ENST00000344523 AKAP4Q5JQC9 854 aa30.84■■■□□ 2.53
NR6A1-201ENST00000344523 FAM182BQ5T319 152 aa30.84■■■□□ 2.53
NR6A1-201ENST00000344523 MPRIPQ6WCQ1 1025 aa30.84■■■□□ 2.53
NR6A1-201ENST00000344523 MARCH10Q8NA82 808 aaPredicted RBP30.84■■■□□ 2.53
NR6A1-201ENST00000344523 TNS2Q63HR2 1409 aa30.84■■■□□ 2.53
NR6A1-201ENST00000344523 GNAT3A8MTJ3 354 aa30.84■■■□□ 2.53
NR6A1-201ENST00000344523 THSD7AQ9UPZ6 1657 aa30.83■■■□□ 2.53
NR6A1-201ENST00000344523 TRIM35Q9UPQ4 493 aa30.83■■■□□ 2.53
NR6A1-201ENST00000344523 MCM10Q7L590 875 aa30.82■■■□□ 2.52
NR6A1-201ENST00000344523 THUMPD2Q9BTF0 503 aaKnown RBP30.82■■■□□ 2.52
NR6A1-201ENST00000344523 LRRC37A3O60309 1634 aa30.82■■■□□ 2.52
NR6A1-201ENST00000344523 PKD1L3Q7Z443 1732 aa30.82■■■□□ 2.52
NR6A1-201ENST00000344523 PLEKHG2Q9H7P9 1386 aa30.82■■■□□ 2.52
NR6A1-201ENST00000344523 LGR6Q9HBX8 967 aa30.82■■■□□ 2.52
NR6A1-201ENST00000344523 MAP3K5Q99683 1374 aa30.81■■■□□ 2.52
NR6A1-201ENST00000344523 RTF1Q92541 710 aaKnown RBP30.8■■■□□ 2.52
NR6A1-201ENST00000344523 IL17REQ8NFR9 667 aa30.78■■■□□ 2.52
NR6A1-201ENST00000344523 RGS12O14924 1447 aa30.78■■■□□ 2.52
NR6A1-201ENST00000344523 SHANK3Q9BYB0 1731 aa30.78■■■□□ 2.52
NR6A1-201ENST00000344523 WWC1Q8IX03 1113 aa30.76■■■□□ 2.51
NR6A1-201ENST00000344523 RNMTO43148 476 aaKnown RBP30.75■■■□□ 2.51
NR6A1-201ENST00000344523 KRT27Q7Z3Y8 459 aa30.75■■■□□ 2.51
NR6A1-201ENST00000344523 NKX1-1Q15270 411 aaPredicted RBP30.74■■■□□ 2.51
NR6A1-201ENST00000344523 DCAF5Q96JK2 942 aa30.73■■■□□ 2.51
NR6A1-201ENST00000344523 DLG5Q8TDM6 1919 aa30.73■■■□□ 2.51
NR6A1-201ENST00000344523 KDM6AO15550 1401 aaPredicted RBP30.73■■■□□ 2.51
NR6A1-201ENST00000344523 HSP90AB1P08238 724 aaKnown RBP30.73■■■□□ 2.51
NR6A1-201ENST00000344523 LMOD3Q0VAK6 560 aa30.73■■■□□ 2.51
NR6A1-201ENST00000344523 HTATSF1O43719 755 aaKnown RBP30.72■■■□□ 2.51
NR6A1-201ENST00000344523 CCDC27Q2M243 656 aa30.71■■■□□ 2.51
NR6A1-201ENST00000344523 ACSBG1Q96GR2 724 aa30.71■■■□□ 2.51
NR6A1-201ENST00000344523 BRWD3Q6RI45 1802 aa30.68■■■□□ 2.5
NR6A1-201ENST00000344523 NGEFQ8N5V2 710 aa30.68■■■□□ 2.5
NR6A1-201ENST00000344523 SYTL4Q96C24 671 aaPredicted RBP30.68■■■□□ 2.5
NR6A1-201ENST00000344523 NCBP3Q53F19 620 aaKnown RBP30.66■■■□□ 2.5
NR6A1-201ENST00000344523 NFATC2IPQ8NCF5 419 aa30.66■■■□□ 2.5
NR6A1-201ENST00000344523 LAS1LQ9Y4W2 734 aaKnown RBP30.66■■■□□ 2.5
NR6A1-201ENST00000344523 ZNF521Q96K83 1311 aa30.66■■■□□ 2.5
NR6A1-201ENST00000344523 CEMIPQ8WUJ3 1361 aa30.66■■■□□ 2.5
NR6A1-201ENST00000344523 PRIM1P49642 420 aaKnown RBP30.66■■■□□ 2.5
NR6A1-201ENST00000344523 CABP4P57796 275 aa30.65■■■□□ 2.5
NR6A1-201ENST00000344523 TEFQ10587 303 aa30.65■■■□□ 2.5
NR6A1-201ENST00000344523 MIS18AQ9NYP9 233 aa30.65■■■□□ 2.5
NR6A1-201ENST00000344523 KCNQ2O43526 872 aa30.64■■■□□ 2.5
NR6A1-201ENST00000344523 EP400Q96L91 3159 aa30.64■■■□□ 2.5
NR6A1-201ENST00000344523 ZBED9Q6R2W3 1325 aa30.64■■■□□ 2.49
NR6A1-201ENST00000344523 SPINK5Q9NQ38 1064 aaPredicted RBP30.63■■■□□ 2.49
NR6A1-201ENST00000344523 CDCA7LQ96GN5 454 aa30.63■■■□□ 2.49
NR6A1-201ENST00000344523 SLC52A2Q9HAB3 445 aa30.63■■■□□ 2.49
NR6A1-201ENST00000344523 ERVV-2B6SEH9 535 aa30.62■■■□□ 2.49
NR6A1-201ENST00000344523 PTF1AQ7RTS3 328 aa30.62■■■□□ 2.49
NR6A1-201ENST00000344523 WDR63Q8IWG1 891 aa30.61■■■□□ 2.49
NR6A1-201ENST00000344523 KAT6BQ8WYB5 2073 aa30.6■■■□□ 2.49
NR6A1-201ENST00000344523 FAM196AQ6ZSG2 479 aa30.6■■■□□ 2.49
NR6A1-201ENST00000344523 TAF7Q15545 349 aaPredicted RBP30.59■■■□□ 2.49
NR6A1-201ENST00000344523 GOLGA2Q08379 1002 aa30.59■■■□□ 2.49
NR6A1-201ENST00000344523 PIGBQ92521 554 aa30.59■■■□□ 2.49
NR6A1-201ENST00000344523 TMOD3Q9NYL9 352 aa30.59■■■□□ 2.49
NR6A1-201ENST00000344523 TOGARAM1Q9Y4F4 1720 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms