RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MORC1Q86VD1 984 aa21.99■■□□□ 1.11
ATG4B-201ENST00000344376 ACSBG1Q96GR2 724 aa21.99■■□□□ 1.11
ATG4B-201ENST00000344376 NHSQ6T4R5 1651 aa21.97■■□□□ 1.11
ATG4B-201ENST00000344376 KCNQ2O43526 872 aa21.96■■□□□ 1.11
ATG4B-201ENST00000344376 NUP188Q5SRE5 1749 aa21.96■■□□□ 1.11
ATG4B-201ENST00000344376 MAP2P11137 1827 aaKnown RBP21.95■■□□□ 1.1
ATG4B-201ENST00000344376 PCDH11XQ9BZA7 1347 aa21.92■■□□□ 1.1
ATG4B-201ENST00000344376 PCDH11YQ9BZA8 1340 aa21.92■■□□□ 1.1
ATG4B-201ENST00000344376 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
ATG4B-201ENST00000344376 NCAPD2Q15021 1401 aa21.91■■□□□ 1.1
ATG4B-201ENST00000344376 EIF4A2Q14240 407 aaKnown RBP21.91■■□□□ 1.1
ATG4B-201ENST00000344376 TXNRD1Q16881 649 aa21.91■■□□□ 1.1
ATG4B-201ENST00000344376 EYA1Q99502 592 aa21.91■■□□□ 1.1
ATG4B-201ENST00000344376 SYTL4Q96C24 671 aaPredicted RBP21.9■■□□□ 1.1
ATG4B-201ENST00000344376 SHANK3Q9BYB0 1731 aa21.89■■□□□ 1.09
ATG4B-201ENST00000344376 PROM2Q8N271 834 aa21.88■■□□□ 1.09
ATG4B-201ENST00000344376 LRP5O75197 1615 aa21.88■■□□□ 1.09
ATG4B-201ENST00000344376 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
ATG4B-201ENST00000344376 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
ATG4B-201ENST00000344376 PRIM1P49642 420 aaKnown RBP21.87■■□□□ 1.09
ATG4B-201ENST00000344376 BTAF1O14981 1849 aa21.86■■□□□ 1.09
ATG4B-201ENST00000344376 SRCAPQ6ZRS2 3230 aa21.86■■□□□ 1.09
ATG4B-201ENST00000344376 DOT1LQ8TEK3 1739 aa21.85■■□□□ 1.09
ATG4B-201ENST00000344376 STK32BQ9NY57 414 aa21.85■■□□□ 1.09
ATG4B-201ENST00000344376 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
ATG4B-201ENST00000344376 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
ATG4B-201ENST00000344376 PLEKHG2Q9H7P9 1386 aa21.84■■□□□ 1.09
ATG4B-201ENST00000344376 IGSF1Q8N6C5 1336 aa21.83■■□□□ 1.09
ATG4B-201ENST00000344376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
ATG4B-201ENST00000344376 PKD1L3Q7Z443 1732 aa21.83■■□□□ 1.08
ATG4B-201ENST00000344376 KAT6BQ8WYB5 2073 aa21.83■■□□□ 1.08
ATG4B-201ENST00000344376 CYP27B1O15528 508 aa21.82■■□□□ 1.08
ATG4B-201ENST00000344376 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
ATG4B-201ENST00000344376 SLC27A3Q5K4L6 730 aa21.81■■□□□ 1.08
ATG4B-201ENST00000344376 SLC15A2Q16348 729 aa21.79■■□□□ 1.08
ATG4B-201ENST00000344376 MTHFSP49914 203 aa21.78■■□□□ 1.08
ATG4B-201ENST00000344376 IFNL2Q8IZJ0 200 aa21.78■■□□□ 1.08
ATG4B-201ENST00000344376 CNGB1Q14028 1251 aaPredicted RBP21.77■■□□□ 1.08
ATG4B-201ENST00000344376 NKX1-1Q15270 411 aaPredicted RBP21.77■■□□□ 1.08
ATG4B-201ENST00000344376 MPRIPQ6WCQ1 1025 aa21.76■■□□□ 1.07
ATG4B-201ENST00000344376 SPON1Q9HCB6 807 aa21.76■■□□□ 1.07
ATG4B-201ENST00000344376 PHKG2P15735 406 aa21.75■■□□□ 1.07
ATG4B-201ENST00000344376 IL13P35225 146 aa21.75■■□□□ 1.07
ATG4B-201ENST00000344376 PLEKHO1Q53GL0 409 aaPredicted RBP21.75■■□□□ 1.07
ATG4B-201ENST00000344376 LRRC4BQ9NT99 713 aa21.75■■□□□ 1.07
ATG4B-201ENST00000344376 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
ATG4B-201ENST00000344376 PAPPAQ13219 1627 aa21.74■■□□□ 1.07
ATG4B-201ENST00000344376 SULT6B1Q6IMI4 303 aa21.74■■□□□ 1.07
ATG4B-201ENST00000344376 CCNL1Q9UK58 526 aaPredicted RBP21.74■■□□□ 1.07
ATG4B-201ENST00000344376 HSP90AB1P08238 724 aaKnown RBP21.72■■□□□ 1.07
ATG4B-201ENST00000344376 HMGB2P26583 209 aaKnown RBP21.72■■□□□ 1.07
ATG4B-201ENST00000344376 AEBP1Q8IUX7 1158 aa21.72■■□□□ 1.07
ATG4B-201ENST00000344376 SMARCC1Q92922 1105 aaPredicted RBP21.72■■□□□ 1.07
ATG4B-201ENST00000344376 KDRP35968 1356 aa21.72■■□□□ 1.07
ATG4B-201ENST00000344376 TMOD3Q9NYL9 352 aa21.71■■□□□ 1.07
ATG4B-201ENST00000344376 PALLDQ8WX93 1383 aa21.71■■□□□ 1.07
ATG4B-201ENST00000344376 TOGARAM1Q9Y4F4 1720 aa21.71■■□□□ 1.07
ATG4B-201ENST00000344376 CASZ1Q86V15 1759 aa21.71■■□□□ 1.07
ATG4B-201ENST00000344376 DIAPH1O60610 1272 aaKnown RBP21.7■■□□□ 1.06
ATG4B-201ENST00000344376 ZNF827Q17R98 1081 aa21.7■■□□□ 1.06
ATG4B-201ENST00000344376 ZNF530Q6P9A1 599 aaPredicted RBP21.7■■□□□ 1.06
ATG4B-201ENST00000344376 PPP1R1BQ9UD71 204 aaPredicted RBP21.7■■□□□ 1.06
ATG4B-201ENST00000344376 LY75O60449 1722 aa21.7■■□□□ 1.06
ATG4B-201ENST00000344376 ZBTB7AO95365 584 aa21.69■■□□□ 1.06
ATG4B-201ENST00000344376 KCNQ4P56696 695 aa21.69■■□□□ 1.06
ATG4B-201ENST00000344376 PIGBQ92521 554 aa21.69■■□□□ 1.06
ATG4B-201ENST00000344376 AKT1S1Q96B36 256 aa21.69■■□□□ 1.06
ATG4B-201ENST00000344376 C1orf141Q5JVX7 400 aa21.68■■□□□ 1.06
ATG4B-201ENST00000344376 DCAF5Q96JK2 942 aa21.68■■□□□ 1.06
ATG4B-201ENST00000344376 PDGFDQ9GZP0 370 aaPredicted RBP21.68■■□□□ 1.06
ATG4B-201ENST00000344376 TFCP2L1Q9NZI6 479 aa21.67■■□□□ 1.06
ATG4B-201ENST00000344376 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
ATG4B-201ENST00000344376 ITGB4P16144 1822 aa21.66■■□□□ 1.06
ATG4B-201ENST00000344376 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
ATG4B-201ENST00000344376 ERVV-2B6SEH9 535 aa21.65■■□□□ 1.06
ATG4B-201ENST00000344376 HMOX1P09601 288 aa21.64■■□□□ 1.05
ATG4B-201ENST00000344376 ATF5Q9Y2D1 282 aaPredicted RBP21.63■■□□□ 1.05
ATG4B-201ENST00000344376 COL3A1P02461 1466 aaPredicted RBP21.62■■□□□ 1.05
ATG4B-201ENST00000344376 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
ATG4B-201ENST00000344376 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
ATG4B-201ENST00000344376 KDM6AO15550 1401 aaPredicted RBP21.61■■□□□ 1.05
ATG4B-201ENST00000344376 CABP4P57796 275 aa21.61■■□□□ 1.05
ATG4B-201ENST00000344376 SLC16A10Q8TF71 515 aa21.61■■□□□ 1.05
ATG4B-201ENST00000344376 QSER1Q2KHR3 1735 aa21.6■■□□□ 1.05
ATG4B-201ENST00000344376 LOC102724428A0A0B4J2F2 783 aa21.6■■□□□ 1.05
ATG4B-201ENST00000344376 SIK1P57059 783 aa21.6■■□□□ 1.05
ATG4B-201ENST00000344376 AKAP4Q5JQC9 854 aa21.6■■□□□ 1.05
ATG4B-201ENST00000344376 ASAP1Q9ULH1 1129 aa21.6■■□□□ 1.05
ATG4B-201ENST00000344376 C5P01031 1676 aa21.59■■□□□ 1.05
ATG4B-201ENST00000344376 PTGER2P43116 358 aa21.59■■□□□ 1.05
ATG4B-201ENST00000344376 PPP2R1AP30153 589 aa21.58■■□□□ 1.05
ATG4B-201ENST00000344376 AK7Q96M32 723 aa21.57■■□□□ 1.04
ATG4B-201ENST00000344376 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
ATG4B-201ENST00000344376 NUDCQ9Y266 331 aa21.57■■□□□ 1.04
ATG4B-201ENST00000344376 MSH5O43196 834 aa21.57■■□□□ 1.04
ATG4B-201ENST00000344376 FLAD1Q8NFF5 587 aa21.57■■□□□ 1.04
ATG4B-201ENST00000344376 ATP6V1AP38606 617 aa21.56■■□□□ 1.04
ATG4B-201ENST00000344376 POLD1P28340 1107 aa21.54■■□□□ 1.04
ATG4B-201ENST00000344376 MTHFSDQ2M296 383 aaKnown RBP21.54■■□□□ 1.04
ATG4B-201ENST00000344376 C4BP0C0L5 1744 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms