RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 NCOA3Q9Y6Q9 1424 aa11□□□□□ -0.65
TRIO-201ENST00000344135 TRIM27P14373 513 aa11□□□□□ -0.65
TRIO-201ENST00000344135 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
TRIO-201ENST00000344135 LGR6Q9HBX8 967 aa11□□□□□ -0.65
TRIO-201ENST00000344135 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
TRIO-201ENST00000344135 ALS2Q96Q42 1657 aa11□□□□□ -0.65
TRIO-201ENST00000344135 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
TRIO-201ENST00000344135 TNS3Q68CZ2 1445 aa11□□□□□ -0.65
TRIO-201ENST00000344135 KIF1AQ12756 1690 aa11□□□□□ -0.65
TRIO-201ENST00000344135 ERBB3P21860 1342 aa11□□□□□ -0.65
TRIO-201ENST00000344135 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
TRIO-201ENST00000344135 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
TRIO-201ENST00000344135 SLIT3O75094 1523 aa10.99□□□□□ -0.65
TRIO-201ENST00000344135 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
TRIO-201ENST00000344135 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
TRIO-201ENST00000344135 RTL1A6NKG5 1358 aa10.99□□□□□ -0.65
TRIO-201ENST00000344135 KIF24Q5T7B8 1368 aa10.98□□□□□ -0.65
TRIO-201ENST00000344135 GNAT3A8MTJ3 354 aa10.98□□□□□ -0.65
TRIO-201ENST00000344135 CHL1O00533 1208 aa10.98□□□□□ -0.65
TRIO-201ENST00000344135 CSB-PGBD3P0DP91 1061 aa10.98□□□□□ -0.65
TRIO-201ENST00000344135 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
TRIO-201ENST00000344135 CRB1P82279 1406 aa10.98□□□□□ -0.65
TRIO-201ENST00000344135 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
TRIO-201ENST00000344135 TSPYL4Q9UJ04 414 aa10.98□□□□□ -0.65
TRIO-201ENST00000344135 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
TRIO-201ENST00000344135 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
TRIO-201ENST00000344135 PRDM11Q9NQV5 511 aa10.97□□□□□ -0.65
TRIO-201ENST00000344135 ZKSCAN2Q63HK3 967 aa10.97□□□□□ -0.65
TRIO-201ENST00000344135 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
TRIO-201ENST00000344135 IGHDP01880 384 aa10.96□□□□□ -0.65
TRIO-201ENST00000344135 CALD1Q05682 793 aaKnown RBP10.96□□□□□ -0.65
TRIO-201ENST00000344135 PDE3AQ14432 1141 aa10.96□□□□□ -0.65
TRIO-201ENST00000344135 USP35Q9P2H5 1018 aa10.96□□□□□ -0.65
TRIO-201ENST00000344135 KCNQ3O43525 872 aa10.96□□□□□ -0.65
TRIO-201ENST00000344135 ATF7IPQ6VMQ6 1270 aa10.96□□□□□ -0.66
TRIO-201ENST00000344135 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.66
TRIO-201ENST00000344135 PCDHB15Q9Y5E8 787 aa10.96□□□□□ -0.66
TRIO-201ENST00000344135 PIP4K2BP78356 416 aa10.95□□□□□ -0.66
TRIO-201ENST00000344135 DZIP1LQ8IYY4 767 aaKnown RBP10.95□□□□□ -0.66
TRIO-201ENST00000344135 ITPRIPQ8IWB1 547 aa10.95□□□□□ -0.66
TRIO-201ENST00000344135 STRN4Q9NRL3 753 aa10.95□□□□□ -0.66
TRIO-201ENST00000344135 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
TRIO-201ENST00000344135 EP400Q96L91 3159 aa10.95□□□□□ -0.66
TRIO-201ENST00000344135 MRPL50Q8N5N7 158 aaKnown RBP10.94□□□□□ -0.66
TRIO-201ENST00000344135 CT47B1P0C2W7 299 aaPredicted RBP10.93□□□□□ -0.66
TRIO-201ENST00000344135 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
TRIO-201ENST00000344135 MVPQ14764 893 aaKnown RBP10.93□□□□□ -0.66
TRIO-201ENST00000344135 G2E3Q7L622 706 aa10.93□□□□□ -0.66
TRIO-201ENST00000344135 C1orf115Q9H7X2 142 aa10.92□□□□□ -0.66
TRIO-201ENST00000344135 KDM2BQ8NHM5 1336 aa10.92□□□□□ -0.66
TRIO-201ENST00000344135 RAPGEF4Q8WZA2 1011 aa10.92□□□□□ -0.66
TRIO-201ENST00000344135 MEGF6O75095 1541 aa10.92□□□□□ -0.66
TRIO-201ENST00000344135 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
TRIO-201ENST00000344135 ALDH1L2Q3SY69 923 aa10.91□□□□□ -0.66
TRIO-201ENST00000344135 LARP1Q6PKG0 1096 aaKnown RBP10.91□□□□□ -0.66
TRIO-201ENST00000344135 TOM1L2Q6ZVM7 507 aa10.91□□□□□ -0.66
TRIO-201ENST00000344135 CAMTA1Q9Y6Y1 1673 aa10.91□□□□□ -0.66
TRIO-201ENST00000344135 PRAMEF22A3QJZ6 481 aa10.91□□□□□ -0.66
TRIO-201ENST00000344135 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
TRIO-201ENST00000344135 PLEKHO1Q53GL0 409 aaPredicted RBP10.91□□□□□ -0.66
TRIO-201ENST00000344135 ANXA1P04083 346 aa10.91□□□□□ -0.66
TRIO-201ENST00000344135 KIF16BQ96L93 1317 aa10.91□□□□□ -0.66
TRIO-201ENST00000344135 COL18A1P39060 1754 aa10.9□□□□□ -0.66
TRIO-201ENST00000344135 F6X3S4 739 aa10.9□□□□□ -0.66
TRIO-201ENST00000344135 RGS3P49796 1198 aa10.9□□□□□ -0.66
TRIO-201ENST00000344135 C1orf141Q5JVX7 400 aa10.9□□□□□ -0.66
TRIO-201ENST00000344135 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
TRIO-201ENST00000344135 SLC39A6Q13433 755 aa10.9□□□□□ -0.66
TRIO-201ENST00000344135 EIF2S2P20042 333 aaKnown RBP10.9□□□□□ -0.66
TRIO-201ENST00000344135 TEFQ10587 303 aa10.9□□□□□ -0.66
TRIO-201ENST00000344135 CYP27B1O15528 508 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 AKAP4Q5JQC9 854 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 CRYBG1Q9Y4K1 1723 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 ADAMTS2O95450 1211 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 CEMIPQ8WUJ3 1361 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 RNMTO43148 476 aaKnown RBP10.89□□□□□ -0.67
TRIO-201ENST00000344135 ZNF428Q96B54 188 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 LTBP4Q8N2S1 1624 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 BTG4Q9NY30 223 aa10.89□□□□□ -0.67
TRIO-201ENST00000344135 BTBD11A6QL63 1104 aa10.88□□□□□ -0.67
TRIO-201ENST00000344135 ROBO1Q9Y6N7 1651 aa10.88□□□□□ -0.67
TRIO-201ENST00000344135 GOLGB1Q14789 3259 aaKnown RBP10.88□□□□□ -0.67
TRIO-201ENST00000344135 CPDO75976 1380 aa10.88□□□□□ -0.67
TRIO-201ENST00000344135 KAT6BQ8WYB5 2073 aa10.88□□□□□ -0.67
TRIO-201ENST00000344135 IPO8O15397 1037 aaKnown RBP10.88□□□□□ -0.67
TRIO-201ENST00000344135 HTATSF1O43719 755 aaKnown RBP10.88□□□□□ -0.67
TRIO-201ENST00000344135 NFATC2IPQ8NCF5 419 aa10.88□□□□□ -0.67
TRIO-201ENST00000344135 NCAPD2Q15021 1401 aa10.88□□□□□ -0.67
TRIO-201ENST00000344135 TATP17735 454 aaPredicted RBP10.88□□□□□ -0.67
TRIO-201ENST00000344135 AMOTQ4VCS5 1084 aa10.88□□□□□ -0.67
TRIO-201ENST00000344135 EVA1CP58658 441 aa10.87□□□□□ -0.67
TRIO-201ENST00000344135 SLC4A10Q6U841 1118 aa10.87□□□□□ -0.67
TRIO-201ENST00000344135 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
TRIO-201ENST00000344135 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
TRIO-201ENST00000344135 CENPQQ7L2Z9 268 aaPredicted RBP10.87□□□□□ -0.67
TRIO-201ENST00000344135 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
TRIO-201ENST00000344135 DDX54Q8TDD1 881 aaKnown RBP10.87□□□□□ -0.67
TRIO-201ENST00000344135 PHAXQ9H814 394 aaKnown RBP10.87□□□□□ -0.67
TRIO-201ENST00000344135 PHKG2P15735 406 aa10.86□□□□□ -0.67
TRIO-201ENST00000344135 ZBTB40Q9NUA8 1239 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms