RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 CRB1P82279 1406 aa17.98■□□□□ 0.47
MS4A4A-202ENST00000343968 SLIT2O94813 1529 aa17.97■□□□□ 0.47
MS4A4A-202ENST00000343968 ZNF853P0CG23 659 aa17.97■□□□□ 0.47
MS4A4A-202ENST00000343968 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
MS4A4A-202ENST00000343968 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
MS4A4A-202ENST00000343968 PKD1L3Q7Z443 1732 aa17.97■□□□□ 0.47
MS4A4A-202ENST00000343968 MEGF6O75095 1541 aa17.97■□□□□ 0.47
MS4A4A-202ENST00000343968 LRRC37A3O60309 1634 aa17.97■□□□□ 0.47
MS4A4A-202ENST00000343968 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 HSPA1LP34931 641 aa17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 EVA1CP58658 441 aa17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 IFT57Q9NWB7 429 aa17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 PARP4Q9UKK3 1724 aaKnown RBP17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
MS4A4A-202ENST00000343968 OVOS2A0A0G2JMS6 1433 aa17.95■□□□□ 0.46
MS4A4A-202ENST00000343968 AKAP4Q5JQC9 854 aa17.95■□□□□ 0.46
MS4A4A-202ENST00000343968 RNF123Q5XPI4 1314 aa17.95■□□□□ 0.46
MS4A4A-202ENST00000343968 GNAI1P63096 354 aa17.94■□□□□ 0.46
MS4A4A-202ENST00000343968 RTF1Q92541 710 aaKnown RBP17.94■□□□□ 0.46
MS4A4A-202ENST00000343968 CFAP44Q96MT7 982 aa17.94■□□□□ 0.46
MS4A4A-202ENST00000343968 ADAMTS7Q9UKP4 1686 aa17.94■□□□□ 0.46
MS4A4A-202ENST00000343968 CEMIPQ8WUJ3 1361 aa17.94■□□□□ 0.46
MS4A4A-202ENST00000343968 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 STRN4Q9NRL3 753 aa17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 FANCIQ9NVI1 1328 aa17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 NUTM2BA6NNL0 878 aaPredicted RBP17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 NUTM2EB1AL46 878 aaPredicted RBP17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 CT47B1P0C2W7 299 aaPredicted RBP17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 NUTM2AQ8IVF1 878 aaPredicted RBP17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
MS4A4A-202ENST00000343968 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
MS4A4A-202ENST00000343968 ZNF530Q6P9A1 599 aaPredicted RBP17.92■□□□□ 0.46
MS4A4A-202ENST00000343968 THUMPD2Q9BTF0 503 aaKnown RBP17.92■□□□□ 0.46
MS4A4A-202ENST00000343968 BABAM1Q9NWV8 329 aa17.92■□□□□ 0.46
MS4A4A-202ENST00000343968 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
MS4A4A-202ENST00000343968 LRP6O75581 1613 aa17.91■□□□□ 0.46
MS4A4A-202ENST00000343968 MCM10Q7L590 875 aa17.91■□□□□ 0.46
MS4A4A-202ENST00000343968 DISP2A7MBM2 1401 aa17.91■□□□□ 0.46
MS4A4A-202ENST00000343968 CHL1O00533 1208 aa17.9■□□□□ 0.46
MS4A4A-202ENST00000343968 NEFLP07196 543 aa17.9■□□□□ 0.46
MS4A4A-202ENST00000343968 IL2RBP14784 551 aa17.9■□□□□ 0.46
MS4A4A-202ENST00000343968 IL17REQ8NFR9 667 aa17.9■□□□□ 0.46
MS4A4A-202ENST00000343968 C1orf141Q5JVX7 400 aa17.9■□□□□ 0.46
MS4A4A-202ENST00000343968 FNBP4Q8N3X1 1017 aaPredicted RBP17.9■□□□□ 0.46
MS4A4A-202ENST00000343968 THRAP3Q9Y2W1 955 aaKnown RBP17.89■□□□□ 0.45
MS4A4A-202ENST00000343968 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
MS4A4A-202ENST00000343968 TSR2Q969E8 191 aaKnown RBP17.88■□□□□ 0.45
MS4A4A-202ENST00000343968 MBIPQ9NS73 344 aa17.88■□□□□ 0.45
MS4A4A-202ENST00000343968 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.88■□□□□ 0.45
MS4A4A-202ENST00000343968 VIRMAQ69YN4 1812 aaKnown RBP17.87■□□□□ 0.45
MS4A4A-202ENST00000343968 PHKG2P15735 406 aa17.87■□□□□ 0.45
MS4A4A-202ENST00000343968 IFNL2Q8IZJ0 200 aa17.87■□□□□ 0.45
MS4A4A-202ENST00000343968 BCL9LQ86UU0 1499 aa17.87■□□□□ 0.45
MS4A4A-202ENST00000343968 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
MS4A4A-202ENST00000343968 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
MS4A4A-202ENST00000343968 ZCRB1Q8TBF4 217 aaKnown RBP17.87■□□□□ 0.45
MS4A4A-202ENST00000343968 SPATA31A1Q5TZJ5 1347 aa17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 SHANK3Q9BYB0 1731 aa17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 SPATA31A5Q5VU36 1347 aa17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 SPATA31A7Q8IWB4 1347 aa17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
MS4A4A-202ENST00000343968 CYP27B1O15528 508 aa17.85■□□□□ 0.45
MS4A4A-202ENST00000343968 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
MS4A4A-202ENST00000343968 EXOSC9Q06265 439 aaKnown RBP17.85■□□□□ 0.45
MS4A4A-202ENST00000343968 TAF7Q15545 349 aaPredicted RBP17.85■□□□□ 0.45
MS4A4A-202ENST00000343968 ERICH6BQ5W0A0 696 aa17.85■□□□□ 0.45
MS4A4A-202ENST00000343968 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
MS4A4A-202ENST00000343968 NKX1-1Q15270 411 aaPredicted RBP17.84■□□□□ 0.45
MS4A4A-202ENST00000343968 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
MS4A4A-202ENST00000343968 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
MS4A4A-202ENST00000343968 SIPA1L3O60292 1781 aaPredicted RBP17.84■□□□□ 0.45
MS4A4A-202ENST00000343968 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
MS4A4A-202ENST00000343968 VPS72Q15906 364 aa17.83■□□□□ 0.45
MS4A4A-202ENST00000343968 BARGINQ6ZT62 677 aa17.83■□□□□ 0.45
MS4A4A-202ENST00000343968 NGLY1Q96IV0 654 aa17.83■□□□□ 0.45
MS4A4A-202ENST00000343968 MRC1P22897 1456 aa17.83■□□□□ 0.45
MS4A4A-202ENST00000343968 DCAF5Q96JK2 942 aa17.83■□□□□ 0.44
MS4A4A-202ENST00000343968 C8orf37Q96NL8 207 aa17.83■□□□□ 0.44
MS4A4A-202ENST00000343968 RARSP54136 660 aaKnown RBP17.82■□□□□ 0.44
MS4A4A-202ENST00000343968 RRP1P56182 461 aaKnown RBP17.82■□□□□ 0.44
MS4A4A-202ENST00000343968 MPRIPQ6WCQ1 1025 aa17.82■□□□□ 0.44
MS4A4A-202ENST00000343968 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
MS4A4A-202ENST00000343968 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
MS4A4A-202ENST00000343968 VAMP4O75379 141 aa17.8■□□□□ 0.44
MS4A4A-202ENST00000343968 USP35Q9P2H5 1018 aa17.8■□□□□ 0.44
MS4A4A-202ENST00000343968 SOS1Q07889 1333 aaPredicted RBP17.8■□□□□ 0.44
MS4A4A-202ENST00000343968 TEFQ10587 303 aa17.8■□□□□ 0.44
MS4A4A-202ENST00000343968 TNS2Q63HR2 1409 aa17.79■□□□□ 0.44
MS4A4A-202ENST00000343968 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
MS4A4A-202ENST00000343968 TSHZ2Q9NRE2 1034 aa17.79■□□□□ 0.44
MS4A4A-202ENST00000343968 BRPF1P55201 1214 aaPredicted RBP17.78■□□□□ 0.44
MS4A4A-202ENST00000343968 USP21Q9UK80 565 aa17.78■□□□□ 0.44
MS4A4A-202ENST00000343968 FKBP8Q14318 412 aa17.77■□□□□ 0.44
MS4A4A-202ENST00000343968 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
MS4A4A-202ENST00000343968 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms