RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 KDRP35968 1356 aa24.66■■□□□ 1.54
EGFR-202ENST00000342916 RIPK4P57078 832 aa24.66■■□□□ 1.54
EGFR-202ENST00000342916 TOM1L2Q6ZVM7 507 aa24.65■■□□□ 1.54
EGFR-202ENST00000342916 NGLY1Q96IV0 654 aa24.65■■□□□ 1.54
EGFR-202ENST00000342916 PELP1Q8IZL8 1130 aaKnown RBP24.64■■□□□ 1.54
EGFR-202ENST00000342916 USP35Q9P2H5 1018 aa24.64■■□□□ 1.54
EGFR-202ENST00000342916 SLIT2O94813 1529 aa24.64■■□□□ 1.53
EGFR-202ENST00000342916 NWD2Q9ULI1 1742 aa24.63■■□□□ 1.53
EGFR-202ENST00000342916 MEX3CQ5U5Q3 659 aaKnown RBP24.63■■□□□ 1.53
EGFR-202ENST00000342916 EXOC6Q8TAG9 804 aa24.63■■□□□ 1.53
EGFR-202ENST00000342916 DLG5Q8TDM6 1919 aa24.63■■□□□ 1.53
EGFR-202ENST00000342916 NCAPD2Q15021 1401 aa24.63■■□□□ 1.53
EGFR-202ENST00000342916 NFE2L2Q16236 605 aa24.61■■□□□ 1.53
EGFR-202ENST00000342916 NEFMP07197 916 aa24.61■■□□□ 1.53
EGFR-202ENST00000342916 MYH16Q9H6N6 1097 aa24.6■■□□□ 1.53
EGFR-202ENST00000342916 C20orf194Q5TEA3 1177 aa24.59■■□□□ 1.53
EGFR-202ENST00000342916 BCL9LQ86UU0 1499 aa24.59■■□□□ 1.53
EGFR-202ENST00000342916 CRB1P82279 1406 aa24.58■■□□□ 1.53
EGFR-202ENST00000342916 BCAR3O75815 825 aa24.58■■□□□ 1.53
EGFR-202ENST00000342916 MEGF6O75095 1541 aa24.58■■□□□ 1.53
EGFR-202ENST00000342916 IL16Q14005 1332 aa24.58■■□□□ 1.53
EGFR-202ENST00000342916 FANCIQ9NVI1 1328 aa24.58■■□□□ 1.52
EGFR-202ENST00000342916 TSR2Q969E8 191 aaKnown RBP24.57■■□□□ 1.52
EGFR-202ENST00000342916 FNBP4Q8N3X1 1017 aaPredicted RBP24.56■■□□□ 1.52
EGFR-202ENST00000342916 CARD10Q9BWT7 1032 aa24.56■■□□□ 1.52
EGFR-202ENST00000342916 CRBNQ96SW2 442 aa24.55■■□□□ 1.52
EGFR-202ENST00000342916 AFF2P51816 1311 aa24.54■■□□□ 1.52
EGFR-202ENST00000342916 MTHFSDQ2M296 383 aaKnown RBP24.54■■□□□ 1.52
EGFR-202ENST00000342916 UNC5CLQ8IV45 518 aa24.54■■□□□ 1.52
EGFR-202ENST00000342916 USP21Q9UK80 565 aa24.54■■□□□ 1.52
EGFR-202ENST00000342916 CCDC136Q96JN2 1154 aa24.53■■□□□ 1.52
EGFR-202ENST00000342916 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.53■■□□□ 1.52
EGFR-202ENST00000342916 RARSP54136 660 aaKnown RBP24.52■■□□□ 1.52
EGFR-202ENST00000342916 CCDC9Q9Y3X0 531 aaKnown RBP24.52■■□□□ 1.52
EGFR-202ENST00000342916 RAPGEF4Q8WZA2 1011 aa24.51■■□□□ 1.51
EGFR-202ENST00000342916 THUMPD2Q9BTF0 503 aaKnown RBP24.51■■□□□ 1.51
EGFR-202ENST00000342916 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.51■■□□□ 1.51
EGFR-202ENST00000342916 WNK3Q9BYP7 1800 aa24.5■■□□□ 1.51
EGFR-202ENST00000342916 SPATA31A1Q5TZJ5 1347 aa24.5■■□□□ 1.51
EGFR-202ENST00000342916 PARP4Q9UKK3 1724 aaKnown RBP24.49■■□□□ 1.51
EGFR-202ENST00000342916 SPATA31A5Q5VU36 1347 aa24.49■■□□□ 1.51
EGFR-202ENST00000342916 SPATA31A7Q8IWB4 1347 aa24.49■■□□□ 1.51
EGFR-202ENST00000342916 EXOSC9Q06265 439 aaKnown RBP24.49■■□□□ 1.51
EGFR-202ENST00000342916 TATP17735 454 aaPredicted RBP24.48■■□□□ 1.51
EGFR-202ENST00000342916 DCTN1Q14203 1278 aa24.47■■□□□ 1.51
EGFR-202ENST00000342916 PKD1L3Q7Z443 1732 aa24.47■■□□□ 1.51
EGFR-202ENST00000342916 IL2RBP14784 551 aa24.46■■□□□ 1.51
EGFR-202ENST00000342916 OVOS2A0A0G2JMS6 1433 aa24.46■■□□□ 1.51
EGFR-202ENST00000342916 SHANK3Q9BYB0 1731 aa24.46■■□□□ 1.51
EGFR-202ENST00000342916 VPS72Q15906 364 aa24.46■■□□□ 1.51
EGFR-202ENST00000342916 LMOD3Q0VAK6 560 aa24.45■■□□□ 1.5
EGFR-202ENST00000342916 CT47B1P0C2W7 299 aaPredicted RBP24.45■■□□□ 1.5
EGFR-202ENST00000342916 VIRMAQ69YN4 1812 aaKnown RBP24.44■■□□□ 1.5
EGFR-202ENST00000342916 DISP2A7MBM2 1401 aa24.44■■□□□ 1.5
EGFR-202ENST00000342916 PLEKHO1Q53GL0 409 aaPredicted RBP24.44■■□□□ 1.5
EGFR-202ENST00000342916 ZNF530Q6P9A1 599 aaPredicted RBP24.44■■□□□ 1.5
EGFR-202ENST00000342916 BCL2L13Q9BXK5 485 aa24.44■■□□□ 1.5
EGFR-202ENST00000342916 MCM10Q7L590 875 aa24.43■■□□□ 1.5
EGFR-202ENST00000342916 CALD1Q05682 793 aaKnown RBP24.43■■□□□ 1.5
EGFR-202ENST00000342916 GAS2L2Q8NHY3 880 aa24.43■■□□□ 1.5
EGFR-202ENST00000342916 ZNF853P0CG23 659 aa24.42■■□□□ 1.5
EGFR-202ENST00000342916 GLI3P10071 1580 aa24.42■■□□□ 1.5
EGFR-202ENST00000342916 FAM98CQ17RN3 349 aaKnown RBP24.42■■□□□ 1.5
EGFR-202ENST00000342916 TSHZ2Q9NRE2 1034 aa24.42■■□□□ 1.5
EGFR-202ENST00000342916 IFT57Q9NWB7 429 aa24.42■■□□□ 1.5
EGFR-202ENST00000342916 LAS1LQ9Y4W2 734 aaKnown RBP24.42■■□□□ 1.5
EGFR-202ENST00000342916 ILDR1Q86SU0 546 aaPredicted RBP24.41■■□□□ 1.5
EGFR-202ENST00000342916 AMOTQ4VCS5 1084 aa24.41■■□□□ 1.5
EGFR-202ENST00000342916 ATRNO75882 1429 aa24.39■■□□□ 1.5
EGFR-202ENST00000342916 MAP3K5Q99683 1374 aa24.39■■□□□ 1.5
EGFR-202ENST00000342916 CYP27B1O15528 508 aa24.39■■□□□ 1.5
EGFR-202ENST00000342916 ZCRB1Q8TBF4 217 aaKnown RBP24.39■■□□□ 1.5
EGFR-202ENST00000342916 FRAT1Q92837 279 aaPredicted RBP24.39■■□□□ 1.5
EGFR-202ENST00000342916 GNAT3A8MTJ3 354 aa24.39■■□□□ 1.49
EGFR-202ENST00000342916 GNAI1P63096 354 aa24.39■■□□□ 1.49
EGFR-202ENST00000342916 PDE3AQ14432 1141 aa24.39■■□□□ 1.49
EGFR-202ENST00000342916 CANXP27824 592 aaKnown RBP24.38■■□□□ 1.49
EGFR-202ENST00000342916 SPG7Q9UQ90 795 aa24.38■■□□□ 1.49
EGFR-202ENST00000342916 EP400Q96L91 3159 aa24.38■■□□□ 1.49
EGFR-202ENST00000342916 LRRC37A3O60309 1634 aa24.38■■□□□ 1.49
EGFR-202ENST00000342916 MPRIPQ6WCQ1 1025 aa24.38■■□□□ 1.49
EGFR-202ENST00000342916 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
EGFR-202ENST00000342916 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
EGFR-202ENST00000342916 MBIPQ9NS73 344 aa24.38■■□□□ 1.49
EGFR-202ENST00000342916 GJD4Q96KN9 370 aaPredicted RBP24.37■■□□□ 1.49
EGFR-202ENST00000342916 CFAP44Q96MT7 982 aa24.37■■□□□ 1.49
EGFR-202ENST00000342916 LGR6Q9HBX8 967 aa24.37■■□□□ 1.49
EGFR-202ENST00000342916 THRAP3Q9Y2W1 955 aaKnown RBP24.37■■□□□ 1.49
EGFR-202ENST00000342916 TRPC5Q9UL62 973 aaPredicted RBP24.37■■□□□ 1.49
EGFR-202ENST00000342916 PHKG2P15735 406 aa24.36■■□□□ 1.49
EGFR-202ENST00000342916 C1orf141Q5JVX7 400 aa24.36■■□□□ 1.49
EGFR-202ENST00000342916 IL17REQ8NFR9 667 aa24.36■■□□□ 1.49
EGFR-202ENST00000342916 PANK1Q8TE04 598 aa24.36■■□□□ 1.49
EGFR-202ENST00000342916 SSH1Q8WYL5 1049 aa24.36■■□□□ 1.49
EGFR-202ENST00000342916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.36■■□□□ 1.49
EGFR-202ENST00000342916 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
EGFR-202ENST00000342916 TNNQ9UQP3 1299 aa24.35■■□□□ 1.49
EGFR-202ENST00000342916 BARGINQ6ZT62 677 aa24.35■■□□□ 1.49
EGFR-202ENST00000342916 RTF1Q92541 710 aaKnown RBP24.34■■□□□ 1.49
EGFR-202ENST00000342916 SMC4Q9NTJ3 1288 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms