RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ANKIB1Q9P2G1 1089 aa17.74■□□□□ 0.43
UBE3B-202ENST00000342494 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-202ENST00000342494 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
UBE3B-202ENST00000342494 ZNF771Q7L3S4 317 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-202ENST00000342494 ZNF287Q9HBT7 754 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 MIS18AQ9NYP9 233 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 IFIT1P09914 478 aaKnown RBP17.73■□□□□ 0.43
UBE3B-202ENST00000342494 AKAP2Q9Y2D5 859 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
UBE3B-202ENST00000342494 DACH1Q9UI36 760 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 PIBF1Q8WXW3 757 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
UBE3B-202ENST00000342494 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
UBE3B-202ENST00000342494 CCDC39Q9UFE4 941 aa17.72■□□□□ 0.43
UBE3B-202ENST00000342494 POLA1P09884 1462 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-202ENST00000342494 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
UBE3B-202ENST00000342494 DAPK1P53355 1430 aa17.72■□□□□ 0.43
UBE3B-202ENST00000342494 SERPINC1P01008 464 aa17.72■□□□□ 0.43
UBE3B-202ENST00000342494 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
UBE3B-202ENST00000342494 MCM10Q7L590 875 aa17.72■□□□□ 0.43
UBE3B-202ENST00000342494 BCL11BQ9C0K0 894 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-202ENST00000342494 KRT32Q14532 448 aa17.71■□□□□ 0.43
UBE3B-202ENST00000342494 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.43
UBE3B-202ENST00000342494 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-202ENST00000342494 IBSPP21815 317 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-202ENST00000342494 IMMTQ16891 758 aaKnown RBP17.71■□□□□ 0.43
UBE3B-202ENST00000342494 RPAP2Q8IXW5 612 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-202ENST00000342494 USHBP1Q8N6Y0 703 aa17.71■□□□□ 0.43
UBE3B-202ENST00000342494 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
UBE3B-202ENST00000342494 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
UBE3B-202ENST00000342494 MATR3P43243 847 aaKnown RBP eCLIP17.71■□□□□ 0.43
UBE3B-202ENST00000342494 CHD1LQ86WJ1 897 aa17.71■□□□□ 0.43
UBE3B-202ENST00000342494 LUC7LQ9NQ29 371 aaKnown RBP17.71■□□□□ 0.43
UBE3B-202ENST00000342494 EPRSP07814 1512 aaKnown RBP17.71■□□□□ 0.43
UBE3B-202ENST00000342494 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.42
UBE3B-202ENST00000342494 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
UBE3B-202ENST00000342494 PDRG1Q9NUG6 133 aa17.7■□□□□ 0.42
UBE3B-202ENST00000342494 KRT85P78386 507 aa17.7■□□□□ 0.42
UBE3B-202ENST00000342494 DEF6Q9H4E7 631 aa17.7■□□□□ 0.42
UBE3B-202ENST00000342494 EXOC5O00471 708 aa17.7■□□□□ 0.42
UBE3B-202ENST00000342494 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
UBE3B-202ENST00000342494 FAM43AQ8N2R8 423 aa17.7■□□□□ 0.42
UBE3B-202ENST00000342494 MYD88Q99836 296 aa17.7■□□□□ 0.42
UBE3B-202ENST00000342494 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
UBE3B-202ENST00000342494 WASF1Q92558 559 aa17.69■□□□□ 0.42
UBE3B-202ENST00000342494 RPGRQ92834 1020 aaKnown RBP17.69■□□□□ 0.42
UBE3B-202ENST00000342494 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
UBE3B-202ENST00000342494 CCP110O43303 1012 aa17.69■□□□□ 0.42
UBE3B-202ENST00000342494 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
UBE3B-202ENST00000342494 ERCC4Q92889 916 aaPredicted RBP17.69■□□□□ 0.42
UBE3B-202ENST00000342494 PPFIBP1Q86W92 1011 aa17.69■□□□□ 0.42
UBE3B-202ENST00000342494 DZIP1Q86YF9 867 aaKnown RBP17.69■□□□□ 0.42
UBE3B-202ENST00000342494 TAF7Q15545 349 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-202ENST00000342494 PAXIP1Q6ZW49 1069 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-202ENST00000342494 MKNK2Q9HBH9 465 aa17.68■□□□□ 0.42
UBE3B-202ENST00000342494 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
UBE3B-202ENST00000342494 TRAK2O60296 914 aa17.68■□□□□ 0.42
UBE3B-202ENST00000342494 CEBPAP49715 358 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-202ENST00000342494 MRE11P49959 708 aa17.68■□□□□ 0.42
UBE3B-202ENST00000342494 TTLL12Q14166 644 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-202ENST00000342494 NFKBIBQ15653 356 aa17.68■□□□□ 0.42
UBE3B-202ENST00000342494 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
UBE3B-202ENST00000342494 TNMDQ9H2S6 317 aa17.67■□□□□ 0.42
UBE3B-202ENST00000342494 IFIT5Q13325 482 aaKnown RBP17.67■□□□□ 0.42
UBE3B-202ENST00000342494 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
UBE3B-202ENST00000342494 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
UBE3B-202ENST00000342494 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
UBE3B-202ENST00000342494 SEC63Q9UGP8 760 aaKnown RBP17.67■□□□□ 0.42
UBE3B-202ENST00000342494 MINDY4BA8MYZ0 360 aa17.67■□□□□ 0.42
UBE3B-202ENST00000342494 NME9Q86XW9 330 aa17.67■□□□□ 0.42
UBE3B-202ENST00000342494 SKIDA1Q1XH10 827 aa17.66■□□□□ 0.42
UBE3B-202ENST00000342494 KIF1BPQ96EK5 621 aa17.66■□□□□ 0.42
UBE3B-202ENST00000342494 EXOC6BQ9Y2D4 811 aa17.66■□□□□ 0.42
UBE3B-202ENST00000342494 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
UBE3B-202ENST00000342494 TNIP1Q15025 636 aa17.66■□□□□ 0.42
UBE3B-202ENST00000342494 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
UBE3B-202ENST00000342494 NOM1Q5C9Z4 860 aaKnown RBP17.66■□□□□ 0.42
UBE3B-202ENST00000342494 KIAA0586Q9BVV6 1533 aa17.66■□□□□ 0.42
UBE3B-202ENST00000342494 CCDC192P0DO97 292 aa17.65■□□□□ 0.42
UBE3B-202ENST00000342494 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
UBE3B-202ENST00000342494 CHMP4BP1P59074 171 aa17.65■□□□□ 0.42
UBE3B-202ENST00000342494 SEPT11Q9NVA2 429 aaKnown RBP17.65■□□□□ 0.42
UBE3B-202ENST00000342494 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
UBE3B-202ENST00000342494 DESP17661 470 aa17.64■□□□□ 0.41
UBE3B-202ENST00000342494 TXLNBQ8N3L3 684 aa17.64■□□□□ 0.41
UBE3B-202ENST00000342494 SCLT1Q96NL6 688 aa17.64■□□□□ 0.41
UBE3B-202ENST00000342494 K7ELQ4 463 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-202ENST00000342494 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-202ENST00000342494 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
UBE3B-202ENST00000342494 ERLIN2O94905 339 aa17.64■□□□□ 0.41
UBE3B-202ENST00000342494 KRT28Q7Z3Y7 464 aa17.64■□□□□ 0.41
UBE3B-202ENST00000342494 CFAP45Q9UL16 551 aa17.64■□□□□ 0.41
UBE3B-202ENST00000342494 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
UBE3B-202ENST00000342494 ARHGEF11O15085 1522 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 NEFHP12036 1026 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 SLC5A1P13866 664 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 MAP3K12Q12852 859 aa17.63■□□□□ 0.41
UBE3B-202ENST00000342494 SPATA32Q96LK8 384 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms