RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 KCNQ2O43526 872 aa20.84■□□□□ 0.93
TNFRSF12A-202ENST00000341627 USHBP1Q8N6Y0 703 aa20.84■□□□□ 0.93
TNFRSF12A-202ENST00000341627 RAPGEF4Q8WZA2 1011 aa20.84■□□□□ 0.93
TNFRSF12A-202ENST00000341627 RGPD2P0DJD1 1756 aa20.84■□□□□ 0.93
TNFRSF12A-202ENST00000341627 EYA1Q99502 592 aa20.83■□□□□ 0.93
TNFRSF12A-202ENST00000341627 TATP17735 454 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF12A-202ENST00000341627 R3HDM1Q15032 1099 aaKnown RBP20.81■□□□□ 0.92
TNFRSF12A-202ENST00000341627 PROM2Q8N271 834 aa20.81■□□□□ 0.92
TNFRSF12A-202ENST00000341627 MEGF6O75095 1541 aa20.8■□□□□ 0.92
TNFRSF12A-202ENST00000341627 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
TNFRSF12A-202ENST00000341627 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
TNFRSF12A-202ENST00000341627 NCAPD2Q15021 1401 aa20.79■□□□□ 0.92
TNFRSF12A-202ENST00000341627 ZCRB1Q8TBF4 217 aaKnown RBP20.79■□□□□ 0.92
TNFRSF12A-202ENST00000341627 PPP2R1AP30153 589 aa20.78■□□□□ 0.92
TNFRSF12A-202ENST00000341627 CFAP53Q96M91 514 aa20.78■□□□□ 0.92
TNFRSF12A-202ENST00000341627 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
TNFRSF12A-202ENST00000341627 DIAPH1O60610 1272 aaKnown RBP20.77■□□□□ 0.92
TNFRSF12A-202ENST00000341627 IL13P35225 146 aa20.77■□□□□ 0.92
TNFRSF12A-202ENST00000341627 SBF2Q86WG5 1849 aa20.76■□□□□ 0.91
TNFRSF12A-202ENST00000341627 RALBP1Q15311 655 aa20.75■□□□□ 0.91
TNFRSF12A-202ENST00000341627 NBPF14Q5TI25 921 aa20.74■□□□□ 0.91
TNFRSF12A-202ENST00000341627 TXNRD1Q16881 649 aa20.73■□□□□ 0.91
TNFRSF12A-202ENST00000341627 RREB1Q92766 1687 aa20.73■□□□□ 0.91
TNFRSF12A-202ENST00000341627 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
TNFRSF12A-202ENST00000341627 SULT6B1Q6IMI4 303 aa20.72■□□□□ 0.91
TNFRSF12A-202ENST00000341627 SPG7Q9UQ90 795 aa20.72■□□□□ 0.91
TNFRSF12A-202ENST00000341627 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
TNFRSF12A-202ENST00000341627 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
TNFRSF12A-202ENST00000341627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNFRSF12A-202ENST00000341627 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF12A-202ENST00000341627 PRIM1P49642 420 aaKnown RBP20.7■□□□□ 0.9
TNFRSF12A-202ENST00000341627 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF12A-202ENST00000341627 NUP188Q5SRE5 1749 aa20.7■□□□□ 0.9
TNFRSF12A-202ENST00000341627 AEBP1Q8IUX7 1158 aa20.69■□□□□ 0.9
TNFRSF12A-202ENST00000341627 NUDCQ9Y266 331 aa20.69■□□□□ 0.9
TNFRSF12A-202ENST00000341627 KDRP35968 1356 aa20.69■□□□□ 0.9
TNFRSF12A-202ENST00000341627 NHSQ6T4R5 1651 aa20.68■□□□□ 0.9
TNFRSF12A-202ENST00000341627 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
TNFRSF12A-202ENST00000341627 CYP27B1O15528 508 aa20.68■□□□□ 0.9
TNFRSF12A-202ENST00000341627 RGPD3A6NKT7 1758 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF12A-202ENST00000341627 RGPD4Q7Z3J3 1758 aa20.67■□□□□ 0.9
TNFRSF12A-202ENST00000341627 AMOTQ4VCS5 1084 aa20.67■□□□□ 0.9
TNFRSF12A-202ENST00000341627 PLEKHO1Q53GL0 409 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF12A-202ENST00000341627 PKD1L3Q7Z443 1732 aa20.67■□□□□ 0.9
TNFRSF12A-202ENST00000341627 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF12A-202ENST00000341627 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
TNFRSF12A-202ENST00000341627 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
TNFRSF12A-202ENST00000341627 HMOX1P09601 288 aa20.65■□□□□ 0.9
TNFRSF12A-202ENST00000341627 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.89
TNFRSF12A-202ENST00000341627 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF12A-202ENST00000341627 LRRC4BQ9NT99 713 aa20.64■□□□□ 0.89
TNFRSF12A-202ENST00000341627 NKX1-1Q15270 411 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF12A-202ENST00000341627 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
TNFRSF12A-202ENST00000341627 PDGFDQ9GZP0 370 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF12A-202ENST00000341627 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
TNFRSF12A-202ENST00000341627 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF12A-202ENST00000341627 PHKG2P15735 406 aa20.61■□□□□ 0.89
TNFRSF12A-202ENST00000341627 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
TNFRSF12A-202ENST00000341627 LRP5O75197 1615 aa20.6■□□□□ 0.89
TNFRSF12A-202ENST00000341627 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF12A-202ENST00000341627 STK32BQ9NY57 414 aa20.6■□□□□ 0.89
TNFRSF12A-202ENST00000341627 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
TNFRSF12A-202ENST00000341627 C1orf141Q5JVX7 400 aa20.59■□□□□ 0.89
TNFRSF12A-202ENST00000341627 SLC27A3Q5K4L6 730 aa20.59■□□□□ 0.89
TNFRSF12A-202ENST00000341627 BTAF1O14981 1849 aa20.59■□□□□ 0.89
TNFRSF12A-202ENST00000341627 KCNQ4P56696 695 aa20.57■□□□□ 0.88
TNFRSF12A-202ENST00000341627 ZNF827Q17R98 1081 aa20.57■□□□□ 0.88
TNFRSF12A-202ENST00000341627 DOT1LQ8TEK3 1739 aa20.57■□□□□ 0.88
TNFRSF12A-202ENST00000341627 FCHSD2O94868 740 aa20.56■□□□□ 0.88
TNFRSF12A-202ENST00000341627 MPRIPQ6WCQ1 1025 aa20.56■□□□□ 0.88
TNFRSF12A-202ENST00000341627 ANP32CO43423 234 aa20.55■□□□□ 0.88
TNFRSF12A-202ENST00000341627 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
TNFRSF12A-202ENST00000341627 AKT1S1Q96B36 256 aa20.55■□□□□ 0.88
TNFRSF12A-202ENST00000341627 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
TNFRSF12A-202ENST00000341627 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
TNFRSF12A-202ENST00000341627 AKAP4Q5JQC9 854 aa20.54■□□□□ 0.88
TNFRSF12A-202ENST00000341627 PIGBQ92521 554 aa20.54■□□□□ 0.88
TNFRSF12A-202ENST00000341627 SPON1Q9HCB6 807 aa20.54■□□□□ 0.88
TNFRSF12A-202ENST00000341627 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
TNFRSF12A-202ENST00000341627 MTHFSDQ2M296 383 aaKnown RBP20.53■□□□□ 0.88
TNFRSF12A-202ENST00000341627 GAS2L2Q8NHY3 880 aa20.53■□□□□ 0.88
TNFRSF12A-202ENST00000341627 ZBTB7AO95365 584 aa20.52■□□□□ 0.88
TNFRSF12A-202ENST00000341627 NEFMP07197 916 aa20.52■□□□□ 0.88
TNFRSF12A-202ENST00000341627 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
TNFRSF12A-202ENST00000341627 CCNL1Q9UK58 526 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF12A-202ENST00000341627 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
TNFRSF12A-202ENST00000341627 TMOD3Q9NYL9 352 aa20.51■□□□□ 0.87
TNFRSF12A-202ENST00000341627 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
TNFRSF12A-202ENST00000341627 PALLDQ8WX93 1383 aa20.49■□□□□ 0.87
TNFRSF12A-202ENST00000341627 PTGER2P43116 358 aa20.49■□□□□ 0.87
TNFRSF12A-202ENST00000341627 CASZ1Q86V15 1759 aa20.49■□□□□ 0.87
TNFRSF12A-202ENST00000341627 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF12A-202ENST00000341627 CABP4P57796 275 aa20.48■□□□□ 0.87
TNFRSF12A-202ENST00000341627 WDR43Q15061 677 aaKnown RBP eCLIP20.48■□□□□ 0.87
TNFRSF12A-202ENST00000341627 SMARCC1Q92922 1105 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF12A-202ENST00000341627 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
TNFRSF12A-202ENST00000341627 ATF5Q9Y2D1 282 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF12A-202ENST00000341627 ITGB4P16144 1822 aa20.46■□□□□ 0.87
TNFRSF12A-202ENST00000341627 GNAT3A8MTJ3 354 aa20.46■□□□□ 0.87
TNFRSF12A-202ENST00000341627 MTFR1LQ9H019 292 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms