RNA–Protein interactions for RNA: ENST00000341403.9

UBXN8-202, Transcript of UBX domain protein 8, humanhuman

TSL 3 BASIC

Gene UBXN8, Length 1,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-202ENST00000341403 MCTP1Q6DN14 999 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 CAVIN1Q6NZI2 390 aaKnown RBP11.62□□□□□ -0.55
UBXN8-202ENST00000341403 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 SPTLC3Q9NUV7 552 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 TERF2IPQ9NYB0 399 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 FAM13BQ9NYF5 915 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 USP25Q9UHP3 1055 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 FBXO3Q9UK99 471 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
UBXN8-202ENST00000341403 GOLGA6L6A8MZA4 724 aa11.61□□□□□ -0.55
UBXN8-202ENST00000341403 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
UBXN8-202ENST00000341403 USP26Q9BXU7 913 aa11.61□□□□□ -0.55
UBXN8-202ENST00000341403 OSBPL3Q9H4L5 887 aa11.61□□□□□ -0.55
UBXN8-202ENST00000341403 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
UBXN8-202ENST00000341403 ATP6V1DQ9Y5K8 247 aa11.61□□□□□ -0.55
UBXN8-202ENST00000341403 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 CHD1O14646 1710 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 ATP7BP35670 1465 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 ANKRD45Q5TZF3 282 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 BCL2L13Q9BXK5 485 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 RBSNQ9H1K0 784 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
UBXN8-202ENST00000341403 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
UBXN8-202ENST00000341403 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
UBXN8-202ENST00000341403 DIAPH1O60610 1272 aaKnown RBP11.59□□□□□ -0.55
UBXN8-202ENST00000341403 HMMRO75330 724 aa11.59□□□□□ -0.55
UBXN8-202ENST00000341403 PTMAP06454 111 aaKnown RBP11.59□□□□□ -0.55
UBXN8-202ENST00000341403 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
UBXN8-202ENST00000341403 CUL4AQ13619 759 aa11.59□□□□□ -0.55
UBXN8-202ENST00000341403 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
UBXN8-202ENST00000341403 ERC2O15083 957 aa11.58□□□□□ -0.56
UBXN8-202ENST00000341403 BRD1O95696 1058 aa11.58□□□□□ -0.56
UBXN8-202ENST00000341403 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
UBXN8-202ENST00000341403 RRP7AQ9Y3A4 280 aaKnown RBP11.58□□□□□ -0.56
UBXN8-202ENST00000341403 PTPRCP08575 1304 aa11.58□□□□□ -0.56
UBXN8-202ENST00000341403 AOX1Q06278 1338 aa11.58□□□□□ -0.56
UBXN8-202ENST00000341403 WDR33Q9C0J8 1336 aaKnown RBP11.58□□□□□ -0.56
UBXN8-202ENST00000341403 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
UBXN8-202ENST00000341403 KIDINS220Q9ULH0 1771 aa11.57□□□□□ -0.56
UBXN8-202ENST00000341403 DLC1Q96QB1 1528 aa11.57□□□□□ -0.56
UBXN8-202ENST00000341403 GABPB1Q06547 395 aaPredicted RBP11.57□□□□□ -0.56
UBXN8-202ENST00000341403 MRPL50Q8N5N7 158 aaKnown RBP11.57□□□□□ -0.56
UBXN8-202ENST00000341403 TNNQ9UQP3 1299 aa11.57□□□□□ -0.56
UBXN8-202ENST00000341403 MLH3Q9UHC1 1453 aa11.57□□□□□ -0.56
UBXN8-202ENST00000341403 RTL1A6NKG5 1358 aa11.56□□□□□ -0.56
UBXN8-202ENST00000341403 AATKQ6ZMQ8 1374 aa11.56□□□□□ -0.56
UBXN8-202ENST00000341403 RGS12O14924 1447 aa11.56□□□□□ -0.56
UBXN8-202ENST00000341403 ITSN1Q15811 1721 aa11.56□□□□□ -0.56
UBXN8-202ENST00000341403 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
UBXN8-202ENST00000341403 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
UBXN8-202ENST00000341403 ANKRD44Q8N8A2 993 aa11.56□□□□□ -0.56
UBXN8-202ENST00000341403 SOS1Q07889 1333 aaPredicted RBP11.56□□□□□ -0.56
UBXN8-202ENST00000341403 A0A1W2PP64 1363 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 KIAA0232Q92628 1395 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
UBXN8-202ENST00000341403 CAVIN2O95810 425 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 ZNF853P0CG23 659 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 DHX8Q14562 1220 aaKnown RBP11.55□□□□□ -0.56
UBXN8-202ENST00000341403 NFE2L2Q16236 605 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
UBXN8-202ENST00000341403 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 TUBGCP6Q96RT7 1819 aa11.55□□□□□ -0.56
UBXN8-202ENST00000341403 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
UBXN8-202ENST00000341403 VAMP4O75379 141 aa11.54□□□□□ -0.56
UBXN8-202ENST00000341403 PRPF40AO75400 957 aaKnown RBP11.54□□□□□ -0.56
UBXN8-202ENST00000341403 ZSCAN20P17040 1043 aaPredicted RBP11.54□□□□□ -0.56
UBXN8-202ENST00000341403 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
UBXN8-202ENST00000341403 NOLC1Q14978 699 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBXN8-202ENST00000341403 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
UBXN8-202ENST00000341403 GPT2Q8TD30 523 aa11.54□□□□□ -0.56
UBXN8-202ENST00000341403 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
UBXN8-202ENST00000341403 NPATQ14207 1427 aa11.53□□□□□ -0.56
UBXN8-202ENST00000341403 CD2BP2O95400 341 aaKnown RBP11.53□□□□□ -0.56
UBXN8-202ENST00000341403 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
UBXN8-202ENST00000341403 TMEM63CQ9P1W3 806 aa11.53□□□□□ -0.56
UBXN8-202ENST00000341403 ATP10DQ9P241 1426 aa11.52□□□□□ -0.56
UBXN8-202ENST00000341403 ARHGEF40Q8TER5 1519 aa11.52□□□□□ -0.57
UBXN8-202ENST00000341403 CCDC66A2RUB6 948 aa11.52□□□□□ -0.57
UBXN8-202ENST00000341403 KIF3BO15066 747 aa11.52□□□□□ -0.57
UBXN8-202ENST00000341403 CTIFO43310 598 aaKnown RBP11.52□□□□□ -0.57
UBXN8-202ENST00000341403 GSPT1P15170 499 aaKnown RBP11.52□□□□□ -0.57
UBXN8-202ENST00000341403 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBXN8-202ENST00000341403 CCDC171Q6TFL3 1326 aa11.52□□□□□ -0.57
UBXN8-202ENST00000341403 AK9Q5TCS8 1911 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 NRKQ7Z2Y5 1582 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 SYCE3A1L190 88 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 UBE2HP62256 183 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 RBM10P98175 930 aaKnown RBP11.51□□□□□ -0.57
UBXN8-202ENST00000341403 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.51□□□□□ -0.57
UBXN8-202ENST00000341403 ANKRD7Q92527 254 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
UBXN8-202ENST00000341403 U2SURPO15042 1029 aaKnown RBP11.5□□□□□ -0.57
UBXN8-202ENST00000341403 TUBB4AP04350 444 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms