RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 DOT1LQ8TEK3 1739 aa19.44■□□□□ 0.7
UPK3BL1-201ENST00000340457 USHBP1Q8N6Y0 703 aa19.44■□□□□ 0.7
UPK3BL1-201ENST00000340457 ZCRB1Q8TBF4 217 aaKnown RBP19.44■□□□□ 0.7
UPK3BL1-201ENST00000340457 PUS7Q96PZ0 661 aaKnown RBP19.44■□□□□ 0.7
UPK3BL1-201ENST00000340457 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
UPK3BL1-201ENST00000340457 FAM208AQ9UK61 1670 aaKnown RBP19.43■□□□□ 0.7
UPK3BL1-201ENST00000340457 MEGF6O75095 1541 aa19.43■□□□□ 0.7
UPK3BL1-201ENST00000340457 POLD1P28340 1107 aa19.43■□□□□ 0.7
UPK3BL1-201ENST00000340457 RRS1Q15050 365 aaKnown RBP19.43■□□□□ 0.7
UPK3BL1-201ENST00000340457 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
UPK3BL1-201ENST00000340457 SLC16A10Q8TF71 515 aa19.42■□□□□ 0.7
UPK3BL1-201ENST00000340457 NSD2O96028 1365 aa19.42■□□□□ 0.7
UPK3BL1-201ENST00000340457 NBPF6Q5VWK0 638 aa19.41■□□□□ 0.7
UPK3BL1-201ENST00000340457 NLGN2Q8NFZ4 835 aa19.41■□□□□ 0.7
UPK3BL1-201ENST00000340457 NBPF4Q96M43 638 aa19.41■□□□□ 0.7
UPK3BL1-201ENST00000340457 SHANK3Q9BYB0 1731 aa19.4■□□□□ 0.7
UPK3BL1-201ENST00000340457 MSH5O43196 834 aa19.4■□□□□ 0.7
UPK3BL1-201ENST00000340457 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
UPK3BL1-201ENST00000340457 CCNL1Q9UK58 526 aaPredicted RBP19.4■□□□□ 0.7
UPK3BL1-201ENST00000340457 QSER1Q2KHR3 1735 aa19.4■□□□□ 0.7
UPK3BL1-201ENST00000340457 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
UPK3BL1-201ENST00000340457 LY75O60449 1722 aa19.37■□□□□ 0.69
UPK3BL1-201ENST00000340457 FYB1O15117 783 aa19.36■□□□□ 0.69
UPK3BL1-201ENST00000340457 C1QTNF8P60827 252 aa19.36■□□□□ 0.69
UPK3BL1-201ENST00000340457 MSL1Q68DK7 614 aa19.36■□□□□ 0.69
UPK3BL1-201ENST00000340457 COL23A1Q86Y22 540 aaPredicted RBP19.36■□□□□ 0.69
UPK3BL1-201ENST00000340457 USP47Q96K76 1375 aa19.35■□□□□ 0.69
UPK3BL1-201ENST00000340457 COL24A1Q17RW2 1714 aa19.35■□□□□ 0.69
UPK3BL1-201ENST00000340457 RAPGEF4Q8WZA2 1011 aa19.34■□□□□ 0.69
UPK3BL1-201ENST00000340457 RTL1A6NKG5 1358 aa19.34■□□□□ 0.69
UPK3BL1-201ENST00000340457 HSP90AB2PQ58FF8 381 aa19.33■□□□□ 0.69
UPK3BL1-201ENST00000340457 YBX3P16989 372 aaKnown RBP eCLIP19.32■□□□□ 0.68
UPK3BL1-201ENST00000340457 TATP17735 454 aaPredicted RBP19.31■□□□□ 0.68
UPK3BL1-201ENST00000340457 SMG6Q86US8 1419 aaKnown RBP19.3■□□□□ 0.68
UPK3BL1-201ENST00000340457 CEP350Q5VT06 3117 aa19.3■□□□□ 0.68
UPK3BL1-201ENST00000340457 TMF1P82094 1093 aa19.29■□□□□ 0.68
UPK3BL1-201ENST00000340457 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
UPK3BL1-201ENST00000340457 MPRIPQ6WCQ1 1025 aa19.29■□□□□ 0.68
UPK3BL1-201ENST00000340457 CGNL1Q0VF96 1302 aa19.29■□□□□ 0.68
UPK3BL1-201ENST00000340457 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
UPK3BL1-201ENST00000340457 GIGYF1O75420 1035 aaPredicted RBP19.28■□□□□ 0.68
UPK3BL1-201ENST00000340457 CYP27B1O15528 508 aa19.27■□□□□ 0.68
UPK3BL1-201ENST00000340457 SMIM5Q71RC9 77 aa19.27■□□□□ 0.68
UPK3BL1-201ENST00000340457 INSRP06213 1382 aa19.27■□□□□ 0.68
UPK3BL1-201ENST00000340457 PALLDQ8WX93 1383 aa19.27■□□□□ 0.68
UPK3BL1-201ENST00000340457 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
UPK3BL1-201ENST00000340457 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
UPK3BL1-201ENST00000340457 EMILIN1Q9Y6C2 1016 aa19.26■□□□□ 0.67
UPK3BL1-201ENST00000340457 C5P01031 1676 aa19.26■□□□□ 0.67
UPK3BL1-201ENST00000340457 FLT4P35916 1363 aa19.26■□□□□ 0.67
UPK3BL1-201ENST00000340457 AMIGO3Q86WK7 504 aa19.25■□□□□ 0.67
UPK3BL1-201ENST00000340457 KIF20BQ96Q89 1820 aa19.25■□□□□ 0.67
UPK3BL1-201ENST00000340457 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
UPK3BL1-201ENST00000340457 GRIN3BO60391 1043 aa19.25■□□□□ 0.67
UPK3BL1-201ENST00000340457 CARD14Q9BXL6 1004 aa19.25■□□□□ 0.67
UPK3BL1-201ENST00000340457 TAF1LQ8IZX4 1826 aa19.24■□□□□ 0.67
UPK3BL1-201ENST00000340457 WWC3Q9ULE0 1092 aa19.24■□□□□ 0.67
UPK3BL1-201ENST00000340457 PHF14O94880 888 aa19.23■□□□□ 0.67
UPK3BL1-201ENST00000340457 TOGARAM1Q9Y4F4 1720 aa19.22■□□□□ 0.67
UPK3BL1-201ENST00000340457 ITGB4P16144 1822 aa19.22■□□□□ 0.67
UPK3BL1-201ENST00000340457 PIGBQ92521 554 aa19.22■□□□□ 0.67
UPK3BL1-201ENST00000340457 AK7Q96M32 723 aa19.22■□□□□ 0.67
UPK3BL1-201ENST00000340457 FLAD1Q8NFF5 587 aa19.21■□□□□ 0.67
UPK3BL1-201ENST00000340457 NSD3Q9BZ95 1437 aa19.2■□□□□ 0.66
UPK3BL1-201ENST00000340457 CD2APQ9Y5K6 639 aa19.2■□□□□ 0.66
UPK3BL1-201ENST00000340457 C4BP0C0L5 1744 aa19.2■□□□□ 0.66
UPK3BL1-201ENST00000340457 CDCA8Q53HL2 280 aa19.19■□□□□ 0.66
UPK3BL1-201ENST00000340457 SMARCC1Q92922 1105 aaPredicted RBP19.19■□□□□ 0.66
UPK3BL1-201ENST00000340457 ATP10DQ9P241 1426 aa19.18■□□□□ 0.66
UPK3BL1-201ENST00000340457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.18■□□□□ 0.66
UPK3BL1-201ENST00000340457 KIF24Q5T7B8 1368 aa19.18■□□□□ 0.66
UPK3BL1-201ENST00000340457 LINC00116Q8NCU8 138 aa19.17■□□□□ 0.66
UPK3BL1-201ENST00000340457 ZNF526Q8TF50 670 aaPredicted RBP19.17■□□□□ 0.66
UPK3BL1-201ENST00000340457 PKD1L3Q7Z443 1732 aa19.17■□□□□ 0.66
UPK3BL1-201ENST00000340457 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
UPK3BL1-201ENST00000340457 EYA1Q99502 592 aa19.16■□□□□ 0.66
UPK3BL1-201ENST00000340457 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
UPK3BL1-201ENST00000340457 LOC102724428A0A0B4J2F2 783 aa19.15■□□□□ 0.66
UPK3BL1-201ENST00000340457 SIK1P57059 783 aa19.15■□□□□ 0.66
UPK3BL1-201ENST00000340457 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
UPK3BL1-201ENST00000340457 ASAP1Q9ULH1 1129 aa19.15■□□□□ 0.66
UPK3BL1-201ENST00000340457 IGSF1Q8N6C5 1336 aa19.14■□□□□ 0.65
UPK3BL1-201ENST00000340457 NCAPD2Q15021 1401 aa19.13■□□□□ 0.65
UPK3BL1-201ENST00000340457 HMGB2P26583 209 aaKnown RBP19.13■□□□□ 0.65
UPK3BL1-201ENST00000340457 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
UPK3BL1-201ENST00000340457 ITPK1Q13572 414 aa19.13■□□□□ 0.65
UPK3BL1-201ENST00000340457 POLR3GLQ9BT43 218 aa19.13■□□□□ 0.65
UPK3BL1-201ENST00000340457 TMOD3Q9NYL9 352 aa19.13■□□□□ 0.65
UPK3BL1-201ENST00000340457 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
UPK3BL1-201ENST00000340457 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
UPK3BL1-201ENST00000340457 GNPATO15228 680 aa19.12■□□□□ 0.65
UPK3BL1-201ENST00000340457 PCGF6Q9BYE7 350 aa19.12■□□□□ 0.65
UPK3BL1-201ENST00000340457 GPBP1L1Q9HC44 474 aaPredicted RBP19.12■□□□□ 0.65
UPK3BL1-201ENST00000340457 POLKQ9UBT6 870 aa19.11■□□□□ 0.65
UPK3BL1-201ENST00000340457 PHKG2P15735 406 aa19.1■□□□□ 0.65
UPK3BL1-201ENST00000340457 SSFA2P28290 1259 aa19.1■□□□□ 0.65
UPK3BL1-201ENST00000340457 ATP6V1AP38606 617 aa19.1■□□□□ 0.65
UPK3BL1-201ENST00000340457 ANKRD26Q9UPS8 1709 aa19.1■□□□□ 0.65
UPK3BL1-201ENST00000340457 IFNL2Q8IZJ0 200 aa19.09■□□□□ 0.65
UPK3BL1-201ENST00000340457 ATG3Q9NT62 314 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms