RNA–Protein interactions for RNA: ENST00000340042.1

GLI4-201, Transcript of GLI family zinc finger 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI4, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI4-201ENST00000340042 RAPGEF4Q8WZA2 1011 aa29.45■■■□□ 2.3
GLI4-201ENST00000340042 POLKQ9UBT6 870 aa29.45■■■□□ 2.3
GLI4-201ENST00000340042 KNSTRNQ9Y448 316 aa29.45■■■□□ 2.3
GLI4-201ENST00000340042 WASHC2AQ641Q2 1341 aa29.44■■■□□ 2.3
GLI4-201ENST00000340042 MAP2P11137 1827 aaKnown RBP29.43■■■□□ 2.3
GLI4-201ENST00000340042 ZCRB1Q8TBF4 217 aaKnown RBP29.43■■■□□ 2.3
GLI4-201ENST00000340042 TATP17735 454 aaPredicted RBP29.4■■■□□ 2.3
GLI4-201ENST00000340042 SHANK3Q9BYB0 1731 aa29.4■■■□□ 2.3
GLI4-201ENST00000340042 MORC1Q86VD1 984 aa29.38■■■□□ 2.29
GLI4-201ENST00000340042 NCAPD2Q15021 1401 aa29.36■■■□□ 2.29
GLI4-201ENST00000340042 SPON1Q9HCB6 807 aa29.36■■■□□ 2.29
GLI4-201ENST00000340042 TXNRD1Q16881 649 aa29.34■■■□□ 2.29
GLI4-201ENST00000340042 PROM2Q8N271 834 aa29.34■■■□□ 2.29
GLI4-201ENST00000340042 BTAF1O14981 1849 aa29.34■■■□□ 2.29
GLI4-201ENST00000340042 AMER1Q5JTC6 1135 aaPredicted RBP29.33■■■□□ 2.29
GLI4-201ENST00000340042 EYA1Q99502 592 aa29.33■■■□□ 2.29
GLI4-201ENST00000340042 PCDH11XQ9BZA7 1347 aa29.32■■■□□ 2.28
GLI4-201ENST00000340042 PCDH11YQ9BZA8 1340 aa29.32■■■□□ 2.28
GLI4-201ENST00000340042 DOT1LQ8TEK3 1739 aa29.32■■■□□ 2.28
GLI4-201ENST00000340042 EIF4A2Q14240 407 aaKnown RBP29.31■■■□□ 2.28
GLI4-201ENST00000340042 SYTL4Q96C24 671 aaPredicted RBP29.31■■■□□ 2.28
GLI4-201ENST00000340042 ANO8Q9HCE9 1232 aaPredicted RBP29.31■■■□□ 2.28
GLI4-201ENST00000340042 KAT6BQ8WYB5 2073 aa29.3■■■□□ 2.28
GLI4-201ENST00000340042 PRIM1P49642 420 aaKnown RBP29.28■■■□□ 2.28
GLI4-201ENST00000340042 PPP1R1BQ9UD71 204 aaPredicted RBP29.28■■■□□ 2.28
GLI4-201ENST00000340042 PKD1L3Q7Z443 1732 aa29.27■■■□□ 2.28
GLI4-201ENST00000340042 PER1O15534 1290 aaPredicted RBP29.25■■■□□ 2.27
GLI4-201ENST00000340042 CYP27B1O15528 508 aa29.23■■■□□ 2.27
GLI4-201ENST00000340042 SPG7Q9UQ90 795 aa29.23■■■□□ 2.27
GLI4-201ENST00000340042 IGSF1Q8N6C5 1336 aa29.23■■■□□ 2.27
GLI4-201ENST00000340042 STK32BQ9NY57 414 aa29.22■■■□□ 2.27
GLI4-201ENST00000340042 CC2D1BQ5T0F9 858 aaKnown RBP29.21■■■□□ 2.27
GLI4-201ENST00000340042 PAPPAQ13219 1627 aa29.19■■■□□ 2.26
GLI4-201ENST00000340042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.19■■■□□ 2.26
GLI4-201ENST00000340042 PLEKHG2Q9H7P9 1386 aa29.18■■■□□ 2.26
GLI4-201ENST00000340042 DCAF8L1A6NGE4 600 aa29.18■■■□□ 2.26
GLI4-201ENST00000340042 SLC15A2Q16348 729 aa29.18■■■□□ 2.26
GLI4-201ENST00000340042 SLC27A3Q5K4L6 730 aa29.17■■■□□ 2.26
GLI4-201ENST00000340042 LRRC4BQ9NT99 713 aa29.17■■■□□ 2.26
GLI4-201ENST00000340042 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
GLI4-201ENST00000340042 CASZ1Q86V15 1759 aa29.15■■■□□ 2.26
GLI4-201ENST00000340042 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
GLI4-201ENST00000340042 TOGARAM1Q9Y4F4 1720 aa29.15■■■□□ 2.26
GLI4-201ENST00000340042 MTHFSP49914 203 aa29.14■■■□□ 2.25
GLI4-201ENST00000340042 PDGFDQ9GZP0 370 aaPredicted RBP29.14■■■□□ 2.25
GLI4-201ENST00000340042 NKX1-1Q15270 411 aaPredicted RBP29.13■■■□□ 2.25
GLI4-201ENST00000340042 LY75O60449 1722 aa29.13■■■□□ 2.25
GLI4-201ENST00000340042 MPRIPQ6WCQ1 1025 aa29.12■■■□□ 2.25
GLI4-201ENST00000340042 IFNL2Q8IZJ0 200 aa29.12■■■□□ 2.25
GLI4-201ENST00000340042 ZBTB7AO95365 584 aa29.11■■■□□ 2.25
GLI4-201ENST00000340042 PHKG2P15735 406 aa29.11■■■□□ 2.25
GLI4-201ENST00000340042 IL13P35225 146 aa29.11■■■□□ 2.25
GLI4-201ENST00000340042 AEBP1Q8IUX7 1158 aa29.11■■■□□ 2.25
GLI4-201ENST00000340042 KCNQ4P56696 695 aa29.1■■■□□ 2.25
GLI4-201ENST00000340042 ZNF827Q17R98 1081 aa29.1■■■□□ 2.25
GLI4-201ENST00000340042 CCNL1Q9UK58 526 aaPredicted RBP29.09■■■□□ 2.25
GLI4-201ENST00000340042 PTGER2P43116 358 aa29.08■■■□□ 2.25
GLI4-201ENST00000340042 SULT6B1Q6IMI4 303 aa29.08■■■□□ 2.25
GLI4-201ENST00000340042 PALLDQ8WX93 1383 aa29.07■■■□□ 2.24
GLI4-201ENST00000340042 PLEKHO1Q53GL0 409 aaPredicted RBP29.07■■■□□ 2.24
GLI4-201ENST00000340042 ATF5Q9Y2D1 282 aaPredicted RBP29.07■■■□□ 2.24
GLI4-201ENST00000340042 ITGB4P16144 1822 aa29.06■■■□□ 2.24
GLI4-201ENST00000340042 KDRP35968 1356 aa29.06■■■□□ 2.24
GLI4-201ENST00000340042 YY1P25490 414 aa29.06■■■□□ 2.24
GLI4-201ENST00000340042 AKT1S1Q96B36 256 aa29.06■■■□□ 2.24
GLI4-201ENST00000340042 MTFR1LQ9H019 292 aa29.06■■■□□ 2.24
GLI4-201ENST00000340042 AMOTQ4VCS5 1084 aa29.05■■■□□ 2.24
GLI4-201ENST00000340042 PIGBQ92521 554 aa29.04■■■□□ 2.24
GLI4-201ENST00000340042 ZNF530Q6P9A1 599 aaPredicted RBP29.03■■■□□ 2.24
GLI4-201ENST00000340042 TMOD3Q9NYL9 352 aa29.03■■■□□ 2.24
GLI4-201ENST00000340042 SMARCC1Q92922 1105 aaPredicted RBP29.02■■■□□ 2.24
GLI4-201ENST00000340042 DIAPH1O60610 1272 aaKnown RBP29.01■■■□□ 2.23
GLI4-201ENST00000340042 HSP90AB1P08238 724 aaKnown RBP29.01■■■□□ 2.23
GLI4-201ENST00000340042 TFCP2L1Q9NZI6 479 aa29■■■□□ 2.23
GLI4-201ENST00000340042 C1orf141Q5JVX7 400 aa28.98■■■□□ 2.23
GLI4-201ENST00000340042 DCAF5Q96JK2 942 aa28.98■■■□□ 2.23
GLI4-201ENST00000340042 COL3A1P02461 1466 aaPredicted RBP28.98■■■□□ 2.23
GLI4-201ENST00000340042 QSER1Q2KHR3 1735 aa28.98■■■□□ 2.23
GLI4-201ENST00000340042 HMOX1P09601 288 aa28.97■■■□□ 2.23
GLI4-201ENST00000340042 SGIP1Q9BQI5 828 aa28.97■■■□□ 2.23
GLI4-201ENST00000340042 C5P01031 1676 aa28.97■■■□□ 2.23
GLI4-201ENST00000340042 PNPLA7Q6ZV29 1317 aa28.96■■■□□ 2.23
GLI4-201ENST00000340042 KDM6AO15550 1401 aaPredicted RBP28.95■■■□□ 2.23
GLI4-201ENST00000340042 SYT17Q9BSW7 474 aa28.95■■■□□ 2.23
GLI4-201ENST00000340042 TUBGCP6Q96RT7 1819 aa28.95■■■□□ 2.22
GLI4-201ENST00000340042 ERVV-2B6SEH9 535 aa28.94■■■□□ 2.22
GLI4-201ENST00000340042 HMGB2P26583 209 aaKnown RBP28.94■■■□□ 2.22
GLI4-201ENST00000340042 FHDC1Q9C0D6 1143 aaPredicted RBP28.94■■■□□ 2.22
GLI4-201ENST00000340042 ASAP1Q9ULH1 1129 aa28.94■■■□□ 2.22
GLI4-201ENST00000340042 SLC16A10Q8TF71 515 aa28.93■■■□□ 2.22
GLI4-201ENST00000340042 ARXQ96QS3 562 aa28.92■■■□□ 2.22
GLI4-201ENST00000340042 LOC102724428A0A0B4J2F2 783 aa28.91■■■□□ 2.22
GLI4-201ENST00000340042 U2SURPO15042 1029 aaKnown RBP28.91■■■□□ 2.22
GLI4-201ENST00000340042 SIK1P57059 783 aa28.91■■■□□ 2.22
GLI4-201ENST00000340042 TAF1LQ8IZX4 1826 aa28.9■■■□□ 2.22
GLI4-201ENST00000340042 CFAP53Q96M91 514 aa28.9■■■□□ 2.22
GLI4-201ENST00000340042 ATG3Q9NT62 314 aa28.9■■■□□ 2.22
GLI4-201ENST00000340042 CABP4P57796 275 aa28.89■■■□□ 2.21
GLI4-201ENST00000340042 C4BP0C0L5 1744 aa28.88■■■□□ 2.21
GLI4-201ENST00000340042 AKAP4Q5JQC9 854 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms