RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 NUTM2EB1AL46 878 aaPredicted RBP10.25□□□□□ -0.77
TMC1-202ENST00000340019 LMOD3Q0VAK6 560 aa10.25□□□□□ -0.77
TMC1-202ENST00000340019 LARP1Q6PKG0 1096 aaKnown RBP10.25□□□□□ -0.77
TMC1-202ENST00000340019 NUTM2AQ8IVF1 878 aaPredicted RBP10.25□□□□□ -0.77
TMC1-202ENST00000340019 PARP4Q9UKK3 1724 aaKnown RBP10.25□□□□□ -0.77
TMC1-202ENST00000340019 TOM1L2Q6ZVM7 507 aa10.25□□□□□ -0.77
TMC1-202ENST00000340019 EVA1CP58658 441 aa10.25□□□□□ -0.77
TMC1-202ENST00000340019 AMOTQ4VCS5 1084 aa10.25□□□□□ -0.77
TMC1-202ENST00000340019 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
TMC1-202ENST00000340019 LRRC37A3O60309 1634 aa10.24□□□□□ -0.77
TMC1-202ENST00000340019 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
TMC1-202ENST00000340019 HTATSF1O43719 755 aaKnown RBP10.24□□□□□ -0.77
TMC1-202ENST00000340019 PLEKHO1Q53GL0 409 aaPredicted RBP10.23□□□□□ -0.77
TMC1-202ENST00000340019 RAPGEF4Q8WZA2 1011 aa10.23□□□□□ -0.77
TMC1-202ENST00000340019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.77
TMC1-202ENST00000340019 OVOS2A0A0G2JMS6 1433 aa10.23□□□□□ -0.77
TMC1-202ENST00000340019 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
TMC1-202ENST00000340019 MAP3K5Q99683 1374 aa10.23□□□□□ -0.77
TMC1-202ENST00000340019 ADAMTS7Q9UKP4 1686 aa10.23□□□□□ -0.77
TMC1-202ENST00000340019 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
TMC1-202ENST00000340019 GNAT3A8MTJ3 354 aa10.22□□□□□ -0.77
TMC1-202ENST00000340019 DCTN1Q14203 1278 aa10.22□□□□□ -0.77
TMC1-202ENST00000340019 SHANK3Q9BYB0 1731 aa10.22□□□□□ -0.77
TMC1-202ENST00000340019 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
TMC1-202ENST00000340019 CALD1Q05682 793 aaKnown RBP10.22□□□□□ -0.77
TMC1-202ENST00000340019 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.22□□□□□ -0.77
TMC1-202ENST00000340019 ZNF853P0CG23 659 aa10.22□□□□□ -0.77
TMC1-202ENST00000340019 MCM10Q7L590 875 aa10.22□□□□□ -0.77
TMC1-202ENST00000340019 DISP2A7MBM2 1401 aa10.21□□□□□ -0.77
TMC1-202ENST00000340019 AKAP4Q5JQC9 854 aa10.21□□□□□ -0.77
TMC1-202ENST00000340019 FNBP4Q8N3X1 1017 aaPredicted RBP10.21□□□□□ -0.77
TMC1-202ENST00000340019 MYH16Q9H6N6 1097 aa10.21□□□□□ -0.77
TMC1-202ENST00000340019 IFT57Q9NWB7 429 aa10.21□□□□□ -0.77
TMC1-202ENST00000340019 BCL9LQ86UU0 1499 aa10.21□□□□□ -0.77
TMC1-202ENST00000340019 IL17REQ8NFR9 667 aa10.21□□□□□ -0.78
TMC1-202ENST00000340019 RTF1Q92541 710 aaKnown RBP10.21□□□□□ -0.78
TMC1-202ENST00000340019 CEMIPQ8WUJ3 1361 aa10.21□□□□□ -0.78
TMC1-202ENST00000340019 FANCIQ9NVI1 1328 aa10.21□□□□□ -0.78
TMC1-202ENST00000340019 IL2RBP14784 551 aa10.2□□□□□ -0.78
TMC1-202ENST00000340019 ZNF530Q6P9A1 599 aaPredicted RBP10.2□□□□□ -0.78
TMC1-202ENST00000340019 PIAS4Q8N2W9 510 aaPredicted RBP10.2□□□□□ -0.78
TMC1-202ENST00000340019 CFAP44Q96MT7 982 aa10.2□□□□□ -0.78
TMC1-202ENST00000340019 C8orf37Q96NL8 207 aa10.2□□□□□ -0.78
TMC1-202ENST00000340019 SPG7Q9UQ90 795 aa10.2□□□□□ -0.78
TMC1-202ENST00000340019 SCN11AQ9UI33 1791 aa10.2□□□□□ -0.78
TMC1-202ENST00000340019 SPATA31A1Q5TZJ5 1347 aa10.19□□□□□ -0.78
TMC1-202ENST00000340019 GNAI1P63096 354 aa10.19□□□□□ -0.78
TMC1-202ENST00000340019 UNC5CLQ8IV45 518 aa10.19□□□□□ -0.78
TMC1-202ENST00000340019 TSR2Q969E8 191 aaKnown RBP10.19□□□□□ -0.78
TMC1-202ENST00000340019 SIPA1L3O60292 1781 aaPredicted RBP10.19□□□□□ -0.78
TMC1-202ENST00000340019 PHKG2P15735 406 aa10.19□□□□□ -0.78
TMC1-202ENST00000340019 NGLY1Q96IV0 654 aa10.19□□□□□ -0.78
TMC1-202ENST00000340019 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
TMC1-202ENST00000340019 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
TMC1-202ENST00000340019 CHL1O00533 1208 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 CYP27B1O15528 508 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 C1orf141Q5JVX7 400 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 USP35Q9P2H5 1018 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 THRAP3Q9Y2W1 955 aaKnown RBP10.18□□□□□ -0.78
TMC1-202ENST00000340019 LGR6Q9HBX8 967 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 MBIPQ9NS73 344 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 RCAN3Q9UKA8 241 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 RNF123Q5XPI4 1314 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 IFNL2Q8IZJ0 200 aa10.18□□□□□ -0.78
TMC1-202ENST00000340019 ZCRB1Q8TBF4 217 aaKnown RBP10.18□□□□□ -0.78
TMC1-202ENST00000340019 SUPT16HQ9Y5B9 1047 aaKnown RBP10.18□□□□□ -0.78
TMC1-202ENST00000340019 KDM6AO15550 1401 aaPredicted RBP10.17□□□□□ -0.78
TMC1-202ENST00000340019 MPRIPQ6WCQ1 1025 aa10.17□□□□□ -0.78
TMC1-202ENST00000340019 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
TMC1-202ENST00000340019 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
TMC1-202ENST00000340019 RNMTO43148 476 aaKnown RBP10.17□□□□□ -0.78
TMC1-202ENST00000340019 VPS72Q15906 364 aa10.17□□□□□ -0.78
TMC1-202ENST00000340019 LAS1LQ9Y4W2 734 aaKnown RBP10.17□□□□□ -0.78
TMC1-202ENST00000340019 KDM3BQ7LBC6 1761 aa10.17□□□□□ -0.78
TMC1-202ENST00000340019 MRC1P22897 1456 aa10.16□□□□□ -0.78
TMC1-202ENST00000340019 EXOSC9Q06265 439 aaKnown RBP10.16□□□□□ -0.78
TMC1-202ENST00000340019 BARGINQ6ZT62 677 aa10.16□□□□□ -0.78
TMC1-202ENST00000340019 BABAM1Q9NWV8 329 aa10.16□□□□□ -0.78
TMC1-202ENST00000340019 USP21Q9UK80 565 aa10.16□□□□□ -0.78
TMC1-202ENST00000340019 CT47B1P0C2W7 299 aaPredicted RBP10.15□□□□□ -0.78
TMC1-202ENST00000340019 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
TMC1-202ENST00000340019 CDCA7Q9BWT1 371 aaPredicted RBP10.15□□□□□ -0.78
TMC1-202ENST00000340019 TAF7Q15545 349 aaPredicted RBP10.15□□□□□ -0.78
TMC1-202ENST00000340019 MEX3CQ5U5Q3 659 aaKnown RBP10.15□□□□□ -0.78
TMC1-202ENST00000340019 TNS2Q63HR2 1409 aa10.15□□□□□ -0.78
TMC1-202ENST00000340019 FBXO41Q8TF61 875 aa10.15□□□□□ -0.78
TMC1-202ENST00000340019 HSP90AB1P08238 724 aaKnown RBP10.15□□□□□ -0.79
TMC1-202ENST00000340019 DCAF5Q96JK2 942 aa10.15□□□□□ -0.79
TMC1-202ENST00000340019 MIS18AQ9NYP9 233 aa10.14□□□□□ -0.79
TMC1-202ENST00000340019 TOGARAM1Q9Y4F4 1720 aa10.14□□□□□ -0.79
TMC1-202ENST00000340019 AFF2P51816 1311 aa10.14□□□□□ -0.79
TMC1-202ENST00000340019 TSPYL4Q9UJ04 414 aa10.14□□□□□ -0.79
TMC1-202ENST00000340019 GLI3P10071 1580 aa10.13□□□□□ -0.79
TMC1-202ENST00000340019 ATRNO75882 1429 aa10.13□□□□□ -0.79
TMC1-202ENST00000340019 TEFQ10587 303 aa10.13□□□□□ -0.79
TMC1-202ENST00000340019 THSD7AQ9UPZ6 1657 aa10.13□□□□□ -0.79
TMC1-202ENST00000340019 RARSP54136 660 aaKnown RBP10.13□□□□□ -0.79
TMC1-202ENST00000340019 TSPYL6Q8N831 410 aa10.13□□□□□ -0.79
TMC1-202ENST00000340019 C8orf58Q8NAV2 365 aa10.13□□□□□ -0.79
TMC1-202ENST00000340019 SLC52A2Q9HAB3 445 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms