RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
SEMA4D-201ENST00000339861 PHF14O94880 888 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 PKP1Q13835 747 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 TRPM2O94759 1503 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 FLIIQ13045 1269 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 CEP85Q6P2H3 762 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 IL13P35225 146 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 SNX21Q969T3 373 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 CLTCL1P53675 1640 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
SEMA4D-201ENST00000339861 CHAF1AQ13111 956 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 STK3Q13188 491 aa13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 GAS2L3Q86XJ1 694 aa13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 YTHDC2Q9H6S0 1430 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 ABCC1P33527 1531 aa13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 GSPT1P15170 499 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 FERMT3Q86UX7 667 aa13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 SPC24Q8NBT2 197 aa13.39□□□□□ -0.27
SEMA4D-201ENST00000339861 IQGAP3Q86VI3 1631 aa13.38□□□□□ -0.27
SEMA4D-201ENST00000339861 PDE1AP54750 535 aa13.38□□□□□ -0.27
SEMA4D-201ENST00000339861 G3BP1Q13283 466 aaKnown RBP eCLIP13.38□□□□□ -0.27
SEMA4D-201ENST00000339861 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
SEMA4D-201ENST00000339861 ESCO1Q5FWF5 840 aa13.38□□□□□ -0.27
SEMA4D-201ENST00000339861 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-201ENST00000339861 CNTROBQ8N137 903 aa13.38□□□□□ -0.27
SEMA4D-201ENST00000339861 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 ZSCAN23Q3MJ62 389 aa13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 CEBPZQ03701 1054 aaKnown RBP13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 ZSCAN30Q86W11 494 aa13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
SEMA4D-201ENST00000339861 KLHL40Q2TBA0 621 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 USP26Q9BXU7 913 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 H3BQV1 296 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 MBD3O95983 291 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 ZNF530Q6P9A1 599 aaPredicted RBP13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 MYL6BP14649 208 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 MSH6P52701 1360 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 SBNO2Q9Y2G9 1366 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 BICD2Q8TD16 824 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 FSD1Q9BTV5 496 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 AMOTL2Q9Y2J4 779 aa13.36□□□□□ -0.27
SEMA4D-201ENST00000339861 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 ISY1Q9ULR0 285 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 CLCN1P35523 988 aa13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 GORABQ5T7V8 394 aa13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 ATP6V1DQ9Y5K8 247 aa13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 KDM4AO75164 1064 aa13.35□□□□□ -0.27
SEMA4D-201ENST00000339861 UNC13BO14795 1591 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 JARID2Q92833 1246 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 TCEANC2Q96MN5 208 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 NLRP2Q9NX02 1062 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 CPA1P15085 419 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 AACSQ86V21 672 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 ZNF592Q92610 1267 aa13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-201ENST00000339861 PRPF40BQ6NWY9 871 aaKnown RBP13.33□□□□□ -0.27
SEMA4D-201ENST00000339861 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.27
SEMA4D-201ENST00000339861 DNAJC2Q99543 621 aaKnown RBP13.33□□□□□ -0.27
SEMA4D-201ENST00000339861 CHD1O14646 1710 aa13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 MCM2P49736 904 aa13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 PI4KAP2A4QPH2 592 aa13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 PI4KAP1Q8N8J0 262 aa13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 USP25Q9UHP3 1055 aa13.33□□□□□ -0.28
SEMA4D-201ENST00000339861 PHAXQ9H814 394 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 CCDC39Q9UFE4 941 aa13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 PTPRCP08575 1304 aa13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 E9PCH4 1651 aa13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 ZCCHC11Q5TAX3 1644 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 CAMK4Q16566 473 aa13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 PNMA6EA0A0J9YXQ4 647 aa13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 BTBD11A6QL63 1104 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms