RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 PRDM11Q9NQV5 511 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 HOXC9P31274 260 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 ORAI2Q96SN7 254 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 ARHGEF40Q8TER5 1519 aa20.32■□□□□ 0.84
PRDM8-201ENST00000339711 GNAI2P04899 355 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 HSPA2P54652 639 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 C22orf23Q9BZE7 217 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
PRDM8-201ENST00000339711 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
PRDM8-201ENST00000339711 PPLO60437 1756 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 RILPL2Q969X0 211 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 NAP1L2Q9ULW6 460 aaPredicted RBP20.3■□□□□ 0.84
PRDM8-201ENST00000339711 F6X3S4 739 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 AMOTQ4VCS5 1084 aa20.3■□□□□ 0.84
PRDM8-201ENST00000339711 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
PRDM8-201ENST00000339711 GOLGA6L3A6NEY3 463 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
PRDM8-201ENST00000339711 GCP02774 474 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 FGD1P98174 961 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
PRDM8-201ENST00000339711 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 KIAA1211Q6ZU35 1233 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 ANKRD24Q8TF21 1146 aa20.28■□□□□ 0.84
PRDM8-201ENST00000339711 STRN4Q9NRL3 753 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 TOM1L2Q6ZVM7 507 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 FOXD4L6Q3SYB3 417 aaPredicted RBP20.27■□□□□ 0.84
PRDM8-201ENST00000339711 FOXD4L3Q6VB84 417 aaPredicted RBP20.27■□□□□ 0.84
PRDM8-201ENST00000339711 RIC3Q7Z5B4 369 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 GBP4Q96PP9 640 aa20.27■□□□□ 0.84
PRDM8-201ENST00000339711 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.83
PRDM8-201ENST00000339711 USP6P35125 1406 aa20.27■□□□□ 0.83
PRDM8-201ENST00000339711 SRCIN1Q9C0H9 1055 aa20.26■□□□□ 0.83
PRDM8-201ENST00000339711 KDM2BQ8NHM5 1336 aa20.26■□□□□ 0.83
PRDM8-201ENST00000339711 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
PRDM8-201ENST00000339711 GPATCH3Q96I76 525 aa20.26■□□□□ 0.83
PRDM8-201ENST00000339711 IP6K1Q92551 441 aa20.25■□□□□ 0.83
PRDM8-201ENST00000339711 PTPRCP08575 1304 aa20.25■□□□□ 0.83
PRDM8-201ENST00000339711 HDAC1Q13547 482 aaPredicted RBP20.25■□□□□ 0.83
PRDM8-201ENST00000339711 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
PRDM8-201ENST00000339711 FLIIQ13045 1269 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 HTATSF1O43719 755 aaKnown RBP20.23■□□□□ 0.83
PRDM8-201ENST00000339711 CDC45O75419 566 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 ZBTB40Q9NUA8 1239 aa20.23■□□□□ 0.83
PRDM8-201ENST00000339711 IL27Q8NEV9 243 aa20.22■□□□□ 0.83
PRDM8-201ENST00000339711 MSNP26038 577 aaKnown RBP20.22■□□□□ 0.83
PRDM8-201ENST00000339711 CHRNA2Q15822 529 aa20.22■□□□□ 0.83
PRDM8-201ENST00000339711 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
PRDM8-201ENST00000339711 CHL1O00533 1208 aa20.22■□□□□ 0.83
PRDM8-201ENST00000339711 FRAT2O75474 233 aaPredicted RBP20.21■□□□□ 0.83
PRDM8-201ENST00000339711 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
PRDM8-201ENST00000339711 NPHP3Q7Z494 1330 aa20.21■□□□□ 0.83
PRDM8-201ENST00000339711 REC8O95072 547 aa20.21■□□□□ 0.83
PRDM8-201ENST00000339711 CABP4P57796 275 aa20.21■□□□□ 0.83
PRDM8-201ENST00000339711 DLC1Q96QB1 1528 aa20.2■□□□□ 0.82
PRDM8-201ENST00000339711 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
PRDM8-201ENST00000339711 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
PRDM8-201ENST00000339711 MSH6P52701 1360 aa20.2■□□□□ 0.82
PRDM8-201ENST00000339711 CABLES1Q8TDN4 633 aa20.19■□□□□ 0.82
PRDM8-201ENST00000339711 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
PRDM8-201ENST00000339711 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
PRDM8-201ENST00000339711 ADAMTS13Q76LX8 1427 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 BRPF3Q9ULD4 1205 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 EXOC6BQ9Y2D4 811 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 MED14O60244 1454 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 PNPLA6Q8IY17 1366 aa20.18■□□□□ 0.82
PRDM8-201ENST00000339711 CPSF1Q10570 1443 aaKnown RBP20.17■□□□□ 0.82
PRDM8-201ENST00000339711 MYL6BP14649 208 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRDM8-201ENST00000339711 MEIS3Q99687 375 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 CDK12Q9NYV4 1490 aaPredicted RBP20.17■□□□□ 0.82
PRDM8-201ENST00000339711 GOLGA6L4A6NEF3 574 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 C8orf34Q49A92 452 aa20.17■□□□□ 0.82
PRDM8-201ENST00000339711 ST18O60284 1047 aa20.16■□□□□ 0.82
PRDM8-201ENST00000339711 IFIT2P09913 472 aaKnown RBP20.16■□□□□ 0.82
PRDM8-201ENST00000339711 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
PRDM8-201ENST00000339711 MAP3K5Q99683 1374 aa20.16■□□□□ 0.82
PRDM8-201ENST00000339711 LRRCC1Q9C099 1032 aa20.16■□□□□ 0.82
PRDM8-201ENST00000339711 ARHGEF10O15013 1369 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 TAF7LQ5H9L4 462 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 AKAP4Q5JQC9 854 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 ZBTB7BO15156 539 aaPredicted RBP20.15■□□□□ 0.82
PRDM8-201ENST00000339711 NBPF6Q5VWK0 638 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 NBPF4Q96M43 638 aa20.15■□□□□ 0.82
PRDM8-201ENST00000339711 NPHP4O75161 1426 aaPredicted RBP20.15■□□□□ 0.82
PRDM8-201ENST00000339711 SRGAP3O43295 1099 aa20.14■□□□□ 0.82
PRDM8-201ENST00000339711 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
PRDM8-201ENST00000339711 ANXA1P04083 346 aa20.14■□□□□ 0.81
PRDM8-201ENST00000339711 NUCB1Q02818 461 aa20.14■□□□□ 0.81
PRDM8-201ENST00000339711 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
PRDM8-201ENST00000339711 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms