RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
PRKN-201ENST00000338468 MEGF6O75095 1541 aa20.94■□□□□ 0.94
PRKN-201ENST00000338468 USHBP1Q8N6Y0 703 aa20.94■□□□□ 0.94
PRKN-201ENST00000338468 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
PRKN-201ENST00000338468 PPM1GO15355 546 aaPredicted RBP20.93■□□□□ 0.94
PRKN-201ENST00000338468 PLSCR1O15162 318 aa20.92■□□□□ 0.94
PRKN-201ENST00000338468 CASZ1Q86V15 1759 aa20.92■□□□□ 0.94
PRKN-201ENST00000338468 NCAPD2Q15021 1401 aa20.91■□□□□ 0.94
PRKN-201ENST00000338468 SHANK3Q9BYB0 1731 aa20.91■□□□□ 0.94
PRKN-201ENST00000338468 MORC1Q86VD1 984 aa20.9■□□□□ 0.94
PRKN-201ENST00000338468 BCL11BQ9C0K0 894 aaPredicted RBP20.9■□□□□ 0.94
PRKN-201ENST00000338468 ANO8Q9HCE9 1232 aaPredicted RBP20.9■□□□□ 0.94
PRKN-201ENST00000338468 NHSQ6T4R5 1651 aa20.86■□□□□ 0.93
PRKN-201ENST00000338468 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
PRKN-201ENST00000338468 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
PRKN-201ENST00000338468 DDX54Q8TDD1 881 aaKnown RBP20.86■□□□□ 0.93
PRKN-201ENST00000338468 EYA1Q99502 592 aa20.86■□□□□ 0.93
PRKN-201ENST00000338468 ACSBG1Q96GR2 724 aa20.84■□□□□ 0.93
PRKN-201ENST00000338468 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
PRKN-201ENST00000338468 ZBTB7AO95365 584 aa20.83■□□□□ 0.93
PRKN-201ENST00000338468 CC2D1BQ5T0F9 858 aaKnown RBP20.83■□□□□ 0.93
PRKN-201ENST00000338468 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
PRKN-201ENST00000338468 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
PRKN-201ENST00000338468 PDGFDQ9GZP0 370 aaPredicted RBP20.81■□□□□ 0.92
PRKN-201ENST00000338468 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
PRKN-201ENST00000338468 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
PRKN-201ENST00000338468 PTGER2P43116 358 aa20.8■□□□□ 0.92
PRKN-201ENST00000338468 PROM2Q8N271 834 aa20.8■□□□□ 0.92
PRKN-201ENST00000338468 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
PRKN-201ENST00000338468 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
PRKN-201ENST00000338468 BTAF1O14981 1849 aa20.78■□□□□ 0.92
PRKN-201ENST00000338468 TXNRD1Q16881 649 aa20.78■□□□□ 0.92
PRKN-201ENST00000338468 UTRNP46939 3433 aa20.77■□□□□ 0.92
PRKN-201ENST00000338468 CYP27B1O15528 508 aa20.77■□□□□ 0.92
PRKN-201ENST00000338468 MTHFSP49914 203 aa20.77■□□□□ 0.92
PRKN-201ENST00000338468 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
PRKN-201ENST00000338468 IL13P35225 146 aa20.76■□□□□ 0.91
PRKN-201ENST00000338468 SLC15A2Q16348 729 aa20.76■□□□□ 0.91
PRKN-201ENST00000338468 PCDH11XQ9BZA7 1347 aa20.76■□□□□ 0.91
PRKN-201ENST00000338468 PCDH11YQ9BZA8 1340 aa20.76■□□□□ 0.91
PRKN-201ENST00000338468 PRIM1P49642 420 aaKnown RBP20.75■□□□□ 0.91
PRKN-201ENST00000338468 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
PRKN-201ENST00000338468 ZNF784Q8NCA9 323 aaPredicted RBP20.75■□□□□ 0.91
PRKN-201ENST00000338468 MTFR1LQ9H019 292 aa20.75■□□□□ 0.91
PRKN-201ENST00000338468 FHDC1Q9C0D6 1143 aaPredicted RBP20.74■□□□□ 0.91
PRKN-201ENST00000338468 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
PRKN-201ENST00000338468 SYT17Q9BSW7 474 aa20.73■□□□□ 0.91
PRKN-201ENST00000338468 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
PRKN-201ENST00000338468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRKN-201ENST00000338468 TOGARAM1Q9Y4F4 1720 aa20.72■□□□□ 0.91
PRKN-201ENST00000338468 PLEKHG2Q9H7P9 1386 aa20.71■□□□□ 0.91
PRKN-201ENST00000338468 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
PRKN-201ENST00000338468 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
PRKN-201ENST00000338468 SYTL4Q96C24 671 aaPredicted RBP20.7■□□□□ 0.9
PRKN-201ENST00000338468 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
PRKN-201ENST00000338468 KDRP35968 1356 aa20.7■□□□□ 0.9
PRKN-201ENST00000338468 PAPPAQ13219 1627 aa20.68■□□□□ 0.9
PRKN-201ENST00000338468 SGIP1Q9BQI5 828 aa20.68■□□□□ 0.9
PRKN-201ENST00000338468 CHD4Q14839 1912 aa20.67■□□□□ 0.9
PRKN-201ENST00000338468 PHKG2P15735 406 aa20.67■□□□□ 0.9
PRKN-201ENST00000338468 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
PRKN-201ENST00000338468 LRRC4BQ9NT99 713 aa20.67■□□□□ 0.9
PRKN-201ENST00000338468 ARXQ96QS3 562 aa20.66■□□□□ 0.9
PRKN-201ENST00000338468 MAP3K5Q99683 1374 aa20.66■□□□□ 0.9
PRKN-201ENST00000338468 LY75O60449 1722 aa20.66■□□□□ 0.9
PRKN-201ENST00000338468 ITGB4P16144 1822 aa20.65■□□□□ 0.9
PRKN-201ENST00000338468 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
PRKN-201ENST00000338468 IFNL2Q8IZJ0 200 aa20.65■□□□□ 0.9
PRKN-201ENST00000338468 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
PRKN-201ENST00000338468 PPP2R1AP30153 589 aa20.62■□□□□ 0.89
PRKN-201ENST00000338468 PLEKHO1Q53GL0 409 aaPredicted RBP20.62■□□□□ 0.89
PRKN-201ENST00000338468 MPRIPQ6WCQ1 1025 aa20.62■□□□□ 0.89
PRKN-201ENST00000338468 HMOX1P09601 288 aa20.61■□□□□ 0.89
PRKN-201ENST00000338468 KCNQ4P56696 695 aa20.61■□□□□ 0.89
PRKN-201ENST00000338468 AMOTQ4VCS5 1084 aa20.61■□□□□ 0.89
PRKN-201ENST00000338468 SLC27A3Q5K4L6 730 aa20.61■□□□□ 0.89
PRKN-201ENST00000338468 PIGBQ92521 554 aa20.61■□□□□ 0.89
PRKN-201ENST00000338468 C1QTNF8P60827 252 aa20.6■□□□□ 0.89
PRKN-201ENST00000338468 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
PRKN-201ENST00000338468 KDM6AO15550 1401 aaPredicted RBP20.6■□□□□ 0.89
PRKN-201ENST00000338468 ZNF827Q17R98 1081 aa20.59■□□□□ 0.89
PRKN-201ENST00000338468 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
PRKN-201ENST00000338468 DDX10Q13206 875 aaKnown RBP20.57■□□□□ 0.88
PRKN-201ENST00000338468 GPR162Q16538 588 aa20.57■□□□□ 0.88
PRKN-201ENST00000338468 AKT1S1Q96B36 256 aa20.57■□□□□ 0.88
PRKN-201ENST00000338468 PALLDQ8WX93 1383 aa20.57■□□□□ 0.88
PRKN-201ENST00000338468 DCAF5Q96JK2 942 aa20.56■□□□□ 0.88
PRKN-201ENST00000338468 QSER1Q2KHR3 1735 aa20.56■□□□□ 0.88
PRKN-201ENST00000338468 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
PRKN-201ENST00000338468 POLD1P28340 1107 aa20.55■□□□□ 0.88
PRKN-201ENST00000338468 KLHL34Q8N239 644 aa20.55■□□□□ 0.88
PRKN-201ENST00000338468 SLC16A10Q8TF71 515 aa20.55■□□□□ 0.88
PRKN-201ENST00000338468 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
PRKN-201ENST00000338468 CCNL1Q9UK58 526 aaPredicted RBP20.55■□□□□ 0.88
PRKN-201ENST00000338468 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
PRKN-201ENST00000338468 ERVV-2B6SEH9 535 aa20.53■□□□□ 0.88
PRKN-201ENST00000338468 CFAP53Q96M91 514 aa20.53■□□□□ 0.88
PRKN-201ENST00000338468 ASAP1Q9ULH1 1129 aa20.53■□□□□ 0.88
PRKN-201ENST00000338468 GOLGB1Q14789 3259 aaKnown RBP20.53■□□□□ 0.88
PRKN-201ENST00000338468 MTHFSDQ2M296 383 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms