RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 MSH6P52701 1360 aa12.86□□□□□ -0.35
ARHGEF3-202ENST00000338458 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
ARHGEF3-202ENST00000338458 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
ARHGEF3-202ENST00000338458 CHL1O00533 1208 aa12.86□□□□□ -0.35
ARHGEF3-202ENST00000338458 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
ARHGEF3-202ENST00000338458 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
ARHGEF3-202ENST00000338458 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
ARHGEF3-202ENST00000338458 LTN1O94822 1766 aa12.85□□□□□ -0.35
ARHGEF3-202ENST00000338458 KDRP35968 1356 aa12.85□□□□□ -0.35
ARHGEF3-202ENST00000338458 MST1RQ04912 1400 aa12.85□□□□□ -0.35
ARHGEF3-202ENST00000338458 MS4A1P11836 297 aa12.85□□□□□ -0.35
ARHGEF3-202ENST00000338458 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
ARHGEF3-202ENST00000338458 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
ARHGEF3-202ENST00000338458 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
ARHGEF3-202ENST00000338458 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
ARHGEF3-202ENST00000338458 RGPD1P0DJD0 1748 aa12.84□□□□□ -0.35
ARHGEF3-202ENST00000338458 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
ARHGEF3-202ENST00000338458 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.35
ARHGEF3-202ENST00000338458 LMTK3Q96Q04 1460 aa12.83□□□□□ -0.36
ARHGEF3-202ENST00000338458 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF3-202ENST00000338458 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
ARHGEF3-202ENST00000338458 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF3-202ENST00000338458 NFAT5O94916 1531 aa12.82□□□□□ -0.36
ARHGEF3-202ENST00000338458 NPHP3Q7Z494 1330 aa12.82□□□□□ -0.36
ARHGEF3-202ENST00000338458 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF3-202ENST00000338458 CRB1P82279 1406 aa12.81□□□□□ -0.36
ARHGEF3-202ENST00000338458 BRINP3Q76B58 766 aa12.81□□□□□ -0.36
ARHGEF3-202ENST00000338458 SLC4A10Q6U841 1118 aa12.81□□□□□ -0.36
ARHGEF3-202ENST00000338458 RTL1A6NKG5 1358 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 KIF24Q5T7B8 1368 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 MAP3K5Q99683 1374 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 RGPD2P0DJD1 1756 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 G2E3Q7L622 706 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 MSH5O43196 834 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 F6X3S4 739 aa12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 EIF2S2P20042 333 aaKnown RBP12.8□□□□□ -0.36
ARHGEF3-202ENST00000338458 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
ARHGEF3-202ENST00000338458 KCNQ3O43525 872 aa12.79□□□□□ -0.36
ARHGEF3-202ENST00000338458 USP19O94966 1318 aa12.78□□□□□ -0.36
ARHGEF3-202ENST00000338458 TEFQ10587 303 aa12.78□□□□□ -0.36
ARHGEF3-202ENST00000338458 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF3-202ENST00000338458 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF3-202ENST00000338458 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
ARHGEF3-202ENST00000338458 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.36
ARHGEF3-202ENST00000338458 ANP32AP39687 249 aaKnown RBP12.77□□□□□ -0.36
ARHGEF3-202ENST00000338458 STRCQ7RTU9 1775 aa12.77□□□□□ -0.37
ARHGEF3-202ENST00000338458 ERBB3P21860 1342 aa12.77□□□□□ -0.37
ARHGEF3-202ENST00000338458 ZBTB7BO15156 539 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF3-202ENST00000338458 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
ARHGEF3-202ENST00000338458 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
ARHGEF3-202ENST00000338458 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
ARHGEF3-202ENST00000338458 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
ARHGEF3-202ENST00000338458 TRPM3Q9HCF6 1732 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 RGPD5Q99666 1765 aa12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 ANXA1P04083 346 aa12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 MED1Q15648 1581 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 FKBP5Q13451 457 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF3-202ENST00000338458 KIF1AQ12756 1690 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 APBB1O00213 710 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 USP35Q9P2H5 1018 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 AAMPQ13685 434 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 ABCC4O15439 1325 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 SLIT3O75094 1523 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 DCCP43146 1447 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 USP54Q70EL1 1684 aa12.74□□□□□ -0.37
ARHGEF3-202ENST00000338458 PXDNQ92626 1479 aa12.73□□□□□ -0.37
ARHGEF3-202ENST00000338458 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
ARHGEF3-202ENST00000338458 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
ARHGEF3-202ENST00000338458 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 MEIS3Q99687 375 aa12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
ARHGEF3-202ENST00000338458 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
ARHGEF3-202ENST00000338458 FLIIQ13045 1269 aa12.71□□□□□ -0.37
ARHGEF3-202ENST00000338458 TOM1L2Q6ZVM7 507 aa12.71□□□□□ -0.37
ARHGEF3-202ENST00000338458 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.38
ARHGEF3-202ENST00000338458 NCOA3Q9Y6Q9 1424 aa12.71□□□□□ -0.38
ARHGEF3-202ENST00000338458 SIRT2Q8IXJ6 389 aa12.7□□□□□ -0.38
ARHGEF3-202ENST00000338458 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
ARHGEF3-202ENST00000338458 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms