RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 SHANK3Q9BYB0 1731 aa33.39■■■□□ 2.94
FAM78B-201ENST00000338353 TNS1Q9HBL0 1735 aaKnown RBP33.39■■■□□ 2.94
FAM78B-201ENST00000338353 DEFB132Q7Z7B7 95 aa33.38■■■□□ 2.93
FAM78B-201ENST00000338353 KAT6BQ8WYB5 2073 aa33.36■■■□□ 2.93
FAM78B-201ENST00000338353 BCL9O00512 1426 aa33.36■■■□□ 2.93
FAM78B-201ENST00000338353 DIAPH1O60610 1272 aaKnown RBP33.36■■■□□ 2.93
FAM78B-201ENST00000338353 PARD3Q8TEW0 1356 aa33.36■■■□□ 2.93
FAM78B-201ENST00000338353 BAG6P46379 1132 aa33.34■■■□□ 2.93
FAM78B-201ENST00000338353 AEBP1Q8IUX7 1158 aa33.34■■■□□ 2.93
FAM78B-201ENST00000338353 COL3A1P02461 1466 aaPredicted RBP33.33■■■□□ 2.93
FAM78B-201ENST00000338353 APBA3O96018 575 aa33.32■■■□□ 2.92
FAM78B-201ENST00000338353 SULT6B1Q6IMI4 303 aa33.32■■■□□ 2.92
FAM78B-201ENST00000338353 ACSBG1Q96GR2 724 aa33.32■■■□□ 2.92
FAM78B-201ENST00000338353 PTF1AQ7RTS3 328 aa33.31■■■□□ 2.92
FAM78B-201ENST00000338353 CFAP53Q96M91 514 aa33.31■■■□□ 2.92
FAM78B-201ENST00000338353 PKD1L3Q7Z443 1732 aa33.31■■■□□ 2.92
FAM78B-201ENST00000338353 PCDH11XQ9BZA7 1347 aa33.3■■■□□ 2.92
FAM78B-201ENST00000338353 PCDH11YQ9BZA8 1340 aa33.3■■■□□ 2.92
FAM78B-201ENST00000338353 EN1Q05925 392 aaPredicted RBP33.29■■■□□ 2.92
FAM78B-201ENST00000338353 BCL11BQ9C0K0 894 aaPredicted RBP33.29■■■□□ 2.92
FAM78B-201ENST00000338353 SPG7Q9UQ90 795 aa33.29■■■□□ 2.92
FAM78B-201ENST00000338353 KCNQ2O43526 872 aa33.28■■■□□ 2.92
FAM78B-201ENST00000338353 CYP27B1O15528 508 aa33.26■■■□□ 2.92
FAM78B-201ENST00000338353 U2SURPO15042 1029 aaKnown RBP33.26■■■□□ 2.91
FAM78B-201ENST00000338353 HMOX1P09601 288 aa33.26■■■□□ 2.91
FAM78B-201ENST00000338353 RALBP1Q15311 655 aa33.26■■■□□ 2.91
FAM78B-201ENST00000338353 KDRP35968 1356 aa33.25■■■□□ 2.91
FAM78B-201ENST00000338353 NHSQ6T4R5 1651 aa33.25■■■□□ 2.91
FAM78B-201ENST00000338353 ANP32CO43423 234 aa33.25■■■□□ 2.91
FAM78B-201ENST00000338353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.25■■■□□ 2.91
FAM78B-201ENST00000338353 DOT1LQ8TEK3 1739 aa33.22■■■□□ 2.91
FAM78B-201ENST00000338353 EZH2Q15910 746 aaKnown RBP33.21■■■□□ 2.91
FAM78B-201ENST00000338353 PLEKHG2Q9H7P9 1386 aa33.2■■■□□ 2.91
FAM78B-201ENST00000338353 PLEKHO1Q53GL0 409 aaPredicted RBP33.2■■■□□ 2.91
FAM78B-201ENST00000338353 SYTL4Q96C24 671 aaPredicted RBP33.2■■■□□ 2.91
FAM78B-201ENST00000338353 CAMKK2Q96RR4 588 aa33.19■■■□□ 2.9
FAM78B-201ENST00000338353 PRIM1P49642 420 aaKnown RBP33.18■■■□□ 2.9
FAM78B-201ENST00000338353 MIER1Q8N108 512 aa33.17■■■□□ 2.9
FAM78B-201ENST00000338353 NUDCQ9Y266 331 aa33.17■■■□□ 2.9
FAM78B-201ENST00000338353 AMOTQ4VCS5 1084 aa33.17■■■□□ 2.9
FAM78B-201ENST00000338353 IFNL2Q8IZJ0 200 aa33.17■■■□□ 2.9
FAM78B-201ENST00000338353 BTAF1O14981 1849 aa33.16■■■□□ 2.9
FAM78B-201ENST00000338353 PHKG2P15735 406 aa33.16■■■□□ 2.9
FAM78B-201ENST00000338353 ZNF530Q6P9A1 599 aaPredicted RBP33.15■■■□□ 2.9
FAM78B-201ENST00000338353 PRKRIP1Q9H875 184 aaPredicted RBP33.14■■■□□ 2.9
FAM78B-201ENST00000338353 MYBBP1AQ9BQG0 1328 aaKnown RBP33.14■■■□□ 2.9
FAM78B-201ENST00000338353 PLSCR1O15162 318 aa33.13■■■□□ 2.89
FAM78B-201ENST00000338353 NKX1-1Q15270 411 aaPredicted RBP33.13■■■□□ 2.89
FAM78B-201ENST00000338353 TOGARAM1Q9Y4F4 1720 aa33.11■■■□□ 2.89
FAM78B-201ENST00000338353 U2AF1L5P0DN76 240 aaPredicted RBP33.11■■■□□ 2.89
FAM78B-201ENST00000338353 U2AF1Q01081 240 aaKnown RBP eCLIP33.11■■■□□ 2.89
FAM78B-201ENST00000338353 RGPD3A6NKT7 1758 aaPredicted RBP33.09■■■□□ 2.89
FAM78B-201ENST00000338353 RGPD4Q7Z3J3 1758 aa33.09■■■□□ 2.89
FAM78B-201ENST00000338353 RREB1Q92766 1687 aa33.08■■■□□ 2.89
FAM78B-201ENST00000338353 C1orf141Q5JVX7 400 aa33.08■■■□□ 2.89
FAM78B-201ENST00000338353 ITGB4P16144 1822 aa33.07■■■□□ 2.88
FAM78B-201ENST00000338353 MPRIPQ6WCQ1 1025 aa33.06■■■□□ 2.88
FAM78B-201ENST00000338353 RSPH6AQ9H0K4 717 aa33.05■■■□□ 2.88
FAM78B-201ENST00000338353 HSP90AB1P08238 724 aaKnown RBP33.04■■■□□ 2.88
FAM78B-201ENST00000338353 PRKAR2BP31323 418 aa33.04■■■□□ 2.88
FAM78B-201ENST00000338353 MTHFSDQ2M296 383 aaKnown RBP33.04■■■□□ 2.88
FAM78B-201ENST00000338353 NUP188Q5SRE5 1749 aa33.03■■■□□ 2.88
FAM78B-201ENST00000338353 PROM2Q8N271 834 aa33.03■■■□□ 2.88
FAM78B-201ENST00000338353 TXNRD1Q16881 649 aa33.02■■■□□ 2.88
FAM78B-201ENST00000338353 DCAF5Q96JK2 942 aa33.02■■■□□ 2.88
FAM78B-201ENST00000338353 KDM6AO15550 1401 aaPredicted RBP33■■■□□ 2.87
FAM78B-201ENST00000338353 FCHSD2O94868 740 aa33■■■□□ 2.87
FAM78B-201ENST00000338353 AKAP4Q5JQC9 854 aa33■■■□□ 2.87
FAM78B-201ENST00000338353 PIGBQ92521 554 aa32.99■■■□□ 2.87
FAM78B-201ENST00000338353 TMOD3Q9NYL9 352 aa32.99■■■□□ 2.87
FAM78B-201ENST00000338353 PHACTR3Q96KR7 559 aa32.98■■■□□ 2.87
FAM78B-201ENST00000338353 ERVV-2B6SEH9 535 aa32.96■■■□□ 2.87
FAM78B-201ENST00000338353 CCER2I3L3R5 266 aa32.96■■■□□ 2.87
FAM78B-201ENST00000338353 GAS2L2Q8NHY3 880 aa32.95■■■□□ 2.86
FAM78B-201ENST00000338353 SCN11AQ9UI33 1791 aa32.94■■■□□ 2.86
FAM78B-201ENST00000338353 PSDA5PKW4 1024 aaPredicted RBP32.92■■■□□ 2.86
FAM78B-201ENST00000338353 CABP4P57796 275 aa32.92■■■□□ 2.86
FAM78B-201ENST00000338353 NBPF14Q5TI25 921 aa32.92■■■□□ 2.86
FAM78B-201ENST00000338353 LY75O60449 1722 aa32.92■■■□□ 2.86
FAM78B-201ENST00000338353 VIRMAQ69YN4 1812 aaKnown RBP32.92■■■□□ 2.86
FAM78B-201ENST00000338353 LGR6Q9HBX8 967 aa32.92■■■□□ 2.86
FAM78B-201ENST00000338353 KCNQ4P56696 695 aa32.91■■■□□ 2.86
FAM78B-201ENST00000338353 R3HDM1Q15032 1099 aaKnown RBP32.91■■■□□ 2.86
FAM78B-201ENST00000338353 LRRC4BQ9NT99 713 aa32.91■■■□□ 2.86
FAM78B-201ENST00000338353 PALLDQ8WX93 1383 aa32.9■■■□□ 2.86
FAM78B-201ENST00000338353 MAP3K5Q99683 1374 aa32.89■■■□□ 2.86
FAM78B-201ENST00000338353 RNMTO43148 476 aaKnown RBP32.88■■■□□ 2.85
FAM78B-201ENST00000338353 SMARCC1Q92922 1105 aaPredicted RBP32.88■■■□□ 2.85
FAM78B-201ENST00000338353 ANO8Q9HCE9 1232 aaPredicted RBP32.88■■■□□ 2.85
FAM78B-201ENST00000338353 ASAP1Q9ULH1 1129 aa32.88■■■□□ 2.85
FAM78B-201ENST00000338353 SLC27A3Q5K4L6 730 aa32.87■■■□□ 2.85
FAM78B-201ENST00000338353 GNAT3A8MTJ3 354 aa32.87■■■□□ 2.85
FAM78B-201ENST00000338353 NFATC2IPQ8NCF5 419 aa32.87■■■□□ 2.85
FAM78B-201ENST00000338353 CCNL1Q9UK58 526 aaPredicted RBP32.87■■■□□ 2.85
FAM78B-201ENST00000338353 NEFMP07197 916 aa32.86■■■□□ 2.85
FAM78B-201ENST00000338353 WDR43Q15061 677 aaKnown RBP eCLIP32.85■■■□□ 2.85
FAM78B-201ENST00000338353 PLEKHF1Q96S99 279 aa32.85■■■□□ 2.85
FAM78B-201ENST00000338353 ATG3Q9NT62 314 aa32.84■■■□□ 2.85
FAM78B-201ENST00000338353 PNNQ9H307 717 aaKnown RBP32.83■■■□□ 2.85
FAM78B-201ENST00000338353 ADAMTS7Q9UKP4 1686 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms