RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 PCDH11YQ9BZA8 1340 aa11.36□□□□□ -0.59
PACRG-201ENST00000337019 MEGF6O75095 1541 aa11.36□□□□□ -0.59
PACRG-201ENST00000337019 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
PACRG-201ENST00000337019 CC2D1BQ5T0F9 858 aaKnown RBP11.35□□□□□ -0.59
PACRG-201ENST00000337019 ACSBG1Q96GR2 724 aa11.35□□□□□ -0.59
PACRG-201ENST00000337019 CAMKK2Q96RR4 588 aa11.35□□□□□ -0.59
PACRG-201ENST00000337019 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
PACRG-201ENST00000337019 SYTL4Q96C24 671 aaPredicted RBP11.34□□□□□ -0.59
PACRG-201ENST00000337019 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
PACRG-201ENST00000337019 SPG7Q9UQ90 795 aa11.33□□□□□ -0.6
PACRG-201ENST00000337019 PLSCR1O15162 318 aa11.32□□□□□ -0.6
PACRG-201ENST00000337019 EIF4A2Q14240 407 aaKnown RBP11.32□□□□□ -0.6
PACRG-201ENST00000337019 NHSQ6T4R5 1651 aa11.32□□□□□ -0.6
PACRG-201ENST00000337019 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
PACRG-201ENST00000337019 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
PACRG-201ENST00000337019 EYA1Q99502 592 aa11.31□□□□□ -0.6
PACRG-201ENST00000337019 NPC1L1Q9UHC9 1359 aa11.31□□□□□ -0.6
PACRG-201ENST00000337019 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
PACRG-201ENST00000337019 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
PACRG-201ENST00000337019 NCAPD2Q15021 1401 aa11.3□□□□□ -0.6
PACRG-201ENST00000337019 RGPD3A6NKT7 1758 aaPredicted RBP11.3□□□□□ -0.6
PACRG-201ENST00000337019 RGPD4Q7Z3J3 1758 aa11.3□□□□□ -0.6
PACRG-201ENST00000337019 PLEKHG2Q9H7P9 1386 aa11.3□□□□□ -0.6
PACRG-201ENST00000337019 KCNQ2O43526 872 aa11.3□□□□□ -0.6
PACRG-201ENST00000337019 RREB1Q92766 1687 aa11.29□□□□□ -0.6
PACRG-201ENST00000337019 SBF2Q86WG5 1849 aa11.29□□□□□ -0.6
PACRG-201ENST00000337019 CCER2I3L3R5 266 aa11.29□□□□□ -0.6
PACRG-201ENST00000337019 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
PACRG-201ENST00000337019 IGSF1Q8N6C5 1336 aa11.29□□□□□ -0.6
PACRG-201ENST00000337019 MTHFSP49914 203 aa11.28□□□□□ -0.6
PACRG-201ENST00000337019 TXNRD1Q16881 649 aa11.28□□□□□ -0.6
PACRG-201ENST00000337019 CFAP53Q96M91 514 aa11.28□□□□□ -0.6
PACRG-201ENST00000337019 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
PACRG-201ENST00000337019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.6
PACRG-201ENST00000337019 PRIM1P49642 420 aaKnown RBP11.27□□□□□ -0.6
PACRG-201ENST00000337019 PTF1AQ7RTS3 328 aa11.27□□□□□ -0.6
PACRG-201ENST00000337019 NUP188Q5SRE5 1749 aa11.27□□□□□ -0.6
PACRG-201ENST00000337019 DOT1LQ8TEK3 1739 aa11.27□□□□□ -0.61
PACRG-201ENST00000337019 DIAPH1O60610 1272 aaKnown RBP11.27□□□□□ -0.61
PACRG-201ENST00000337019 PLEKHO1Q53GL0 409 aaPredicted RBP11.27□□□□□ -0.61
PACRG-201ENST00000337019 IFNL2Q8IZJ0 200 aa11.27□□□□□ -0.61
PACRG-201ENST00000337019 HSP90AB1P08238 724 aaKnown RBP11.26□□□□□ -0.61
PACRG-201ENST00000337019 HMGB2P26583 209 aaKnown RBP11.26□□□□□ -0.61
PACRG-201ENST00000337019 AMOTQ4VCS5 1084 aa11.26□□□□□ -0.61
PACRG-201ENST00000337019 C1orf141Q5JVX7 400 aa11.26□□□□□ -0.61
PACRG-201ENST00000337019 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
PACRG-201ENST00000337019 CYP27B1O15528 508 aa11.25□□□□□ -0.61
PACRG-201ENST00000337019 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
PACRG-201ENST00000337019 SULT6B1Q6IMI4 303 aa11.25□□□□□ -0.61
PACRG-201ENST00000337019 BTAF1O14981 1849 aa11.25□□□□□ -0.61
PACRG-201ENST00000337019 SHANK3Q9BYB0 1731 aa11.24□□□□□ -0.61
PACRG-201ENST00000337019 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
PACRG-201ENST00000337019 TMOD3Q9NYL9 352 aa11.24□□□□□ -0.61
PACRG-201ENST00000337019 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
PACRG-201ENST00000337019 PHKG2P15735 406 aa11.24□□□□□ -0.61
PACRG-201ENST00000337019 IL13P35225 146 aa11.24□□□□□ -0.61
PACRG-201ENST00000337019 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
PACRG-201ENST00000337019 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
PACRG-201ENST00000337019 AEBP1Q8IUX7 1158 aa11.23□□□□□ -0.61
PACRG-201ENST00000337019 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
PACRG-201ENST00000337019 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
PACRG-201ENST00000337019 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
PACRG-201ENST00000337019 ANP32CO43423 234 aa11.22□□□□□ -0.61
PACRG-201ENST00000337019 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
PACRG-201ENST00000337019 SLC15A2Q16348 729 aa11.22□□□□□ -0.61
PACRG-201ENST00000337019 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
PACRG-201ENST00000337019 KDRP35968 1356 aa11.22□□□□□ -0.61
PACRG-201ENST00000337019 PALLDQ8WX93 1383 aa11.22□□□□□ -0.61
PACRG-201ENST00000337019 KAT6BQ8WYB5 2073 aa11.22□□□□□ -0.61
PACRG-201ENST00000337019 LRP5O75197 1615 aa11.22□□□□□ -0.61
PACRG-201ENST00000337019 HMOX1P09601 288 aa11.21□□□□□ -0.61
PACRG-201ENST00000337019 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
PACRG-201ENST00000337019 PROM2Q8N271 834 aa11.21□□□□□ -0.61
PACRG-201ENST00000337019 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
PACRG-201ENST00000337019 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.61
PACRG-201ENST00000337019 SPON1Q9HCB6 807 aa11.2□□□□□ -0.62
PACRG-201ENST00000337019 NEFLP07196 543 aa11.2□□□□□ -0.62
PACRG-201ENST00000337019 TFCP2L1Q9NZI6 479 aa11.2□□□□□ -0.62
PACRG-201ENST00000337019 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
PACRG-201ENST00000337019 PPP2R1AP30153 589 aa11.19□□□□□ -0.62
PACRG-201ENST00000337019 CABP4P57796 275 aa11.19□□□□□ -0.62
PACRG-201ENST00000337019 NEFMP07197 916 aa11.18□□□□□ -0.62
PACRG-201ENST00000337019 AKAP4Q5JQC9 854 aa11.18□□□□□ -0.62
PACRG-201ENST00000337019 PIGBQ92521 554 aa11.18□□□□□ -0.62
PACRG-201ENST00000337019 LRRC4BQ9NT99 713 aa11.18□□□□□ -0.62
PACRG-201ENST00000337019 COL3A1P02461 1466 aaPredicted RBP11.18□□□□□ -0.62
PACRG-201ENST00000337019 TOGARAM1Q9Y4F4 1720 aa11.18□□□□□ -0.62
PACRG-201ENST00000337019 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
PACRG-201ENST00000337019 AK7Q96M32 723 aa11.17□□□□□ -0.62
PACRG-201ENST00000337019 PAPPAQ13219 1627 aa11.17□□□□□ -0.62
PACRG-201ENST00000337019 MSH5O43196 834 aa11.17□□□□□ -0.62
PACRG-201ENST00000337019 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
PACRG-201ENST00000337019 KCNQ4P56696 695 aa11.17□□□□□ -0.62
PACRG-201ENST00000337019 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
PACRG-201ENST00000337019 ZNF827Q17R98 1081 aa11.17□□□□□ -0.62
PACRG-201ENST00000337019 ZBTB7AO95365 584 aa11.16□□□□□ -0.62
PACRG-201ENST00000337019 RALBP1Q15311 655 aa11.16□□□□□ -0.62
PACRG-201ENST00000337019 MTFR1LQ9H019 292 aa11.16□□□□□ -0.62
PACRG-201ENST00000337019 KDM6AO15550 1401 aaPredicted RBP11.16□□□□□ -0.62
PACRG-201ENST00000337019 LY75O60449 1722 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms