RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 MEGF6O75095 1541 aa21.24■□□□□ 0.99
MRPL55-202ENST00000336300 BCL9O00512 1426 aa21.24■□□□□ 0.99
MRPL55-202ENST00000336300 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
MRPL55-202ENST00000336300 APBA3O96018 575 aa21.23■□□□□ 0.99
MRPL55-202ENST00000336300 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
MRPL55-202ENST00000336300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.23■□□□□ 0.99
MRPL55-202ENST00000336300 PCDH11XQ9BZA7 1347 aa21.23■□□□□ 0.99
MRPL55-202ENST00000336300 PCDH11YQ9BZA8 1340 aa21.23■□□□□ 0.99
MRPL55-202ENST00000336300 BCL11BQ9C0K0 894 aaPredicted RBP21.22■□□□□ 0.99
MRPL55-202ENST00000336300 NUDCQ9Y266 331 aa21.22■□□□□ 0.99
MRPL55-202ENST00000336300 PARD3Q8TEW0 1356 aa21.22■□□□□ 0.99
MRPL55-202ENST00000336300 PLEKHG2Q9H7P9 1386 aa21.21■□□□□ 0.99
MRPL55-202ENST00000336300 U2SURPO15042 1029 aaKnown RBP21.2■□□□□ 0.98
MRPL55-202ENST00000336300 AMOTQ4VCS5 1084 aa21.2■□□□□ 0.98
MRPL55-202ENST00000336300 PLEKHO1Q53GL0 409 aaPredicted RBP21.2■□□□□ 0.98
MRPL55-202ENST00000336300 RGPD1P0DJD0 1748 aa21.2■□□□□ 0.98
MRPL55-202ENST00000336300 DEFB132Q7Z7B7 95 aa21.19■□□□□ 0.98
MRPL55-202ENST00000336300 ACSBG1Q96GR2 724 aa21.19■□□□□ 0.98
MRPL55-202ENST00000336300 EN1Q05925 392 aaPredicted RBP21.17■□□□□ 0.98
MRPL55-202ENST00000336300 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
MRPL55-202ENST00000336300 IFNL2Q8IZJ0 200 aa21.17■□□□□ 0.98
MRPL55-202ENST00000336300 KDRP35968 1356 aa21.16■□□□□ 0.98
MRPL55-202ENST00000336300 HMOX1P09601 288 aa21.16■□□□□ 0.98
MRPL55-202ENST00000336300 SYTL4Q96C24 671 aaPredicted RBP21.16■□□□□ 0.98
MRPL55-202ENST00000336300 CYP27B1O15528 508 aa21.15■□□□□ 0.98
MRPL55-202ENST00000336300 PLSCR1O15162 318 aa21.14■□□□□ 0.97
MRPL55-202ENST00000336300 KCNQ2O43526 872 aa21.14■□□□□ 0.97
MRPL55-202ENST00000336300 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
MRPL55-202ENST00000336300 HSP90AB1P08238 724 aaKnown RBP21.13■□□□□ 0.97
MRPL55-202ENST00000336300 C1orf141Q5JVX7 400 aa21.13■□□□□ 0.97
MRPL55-202ENST00000336300 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
MRPL55-202ENST00000336300 PHKG2P15735 406 aa21.12■□□□□ 0.97
MRPL55-202ENST00000336300 PRIM1P49642 420 aaKnown RBP21.12■□□□□ 0.97
MRPL55-202ENST00000336300 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.97
MRPL55-202ENST00000336300 NKX1-1Q15270 411 aaPredicted RBP21.12■□□□□ 0.97
MRPL55-202ENST00000336300 EZH2Q15910 746 aaKnown RBP21.12■□□□□ 0.97
MRPL55-202ENST00000336300 CAMKK2Q96RR4 588 aa21.12■□□□□ 0.97
MRPL55-202ENST00000336300 COL3A1P02461 1466 aaPredicted RBP21.12■□□□□ 0.97
MRPL55-202ENST00000336300 KAT6BQ8WYB5 2073 aa21.11■□□□□ 0.97
MRPL55-202ENST00000336300 ZNF530Q6P9A1 599 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-202ENST00000336300 PRKRIP1Q9H875 184 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-202ENST00000336300 SBF2Q86WG5 1849 aa21.11■□□□□ 0.97
MRPL55-202ENST00000336300 PKD1L3Q7Z443 1732 aa21.09■□□□□ 0.97
MRPL55-202ENST00000336300 TNS1Q9HBL0 1735 aaKnown RBP21.09■□□□□ 0.97
MRPL55-202ENST00000336300 PTF1AQ7RTS3 328 aa21.09■□□□□ 0.97
MRPL55-202ENST00000336300 DCAF5Q96JK2 942 aa21.08■□□□□ 0.97
MRPL55-202ENST00000336300 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.97
MRPL55-202ENST00000336300 FCHSD2O94868 740 aa21.07■□□□□ 0.96
MRPL55-202ENST00000336300 NEFMP07197 916 aa21.07■□□□□ 0.96
MRPL55-202ENST00000336300 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
MRPL55-202ENST00000336300 NHSQ6T4R5 1651 aa21.06■□□□□ 0.96
MRPL55-202ENST00000336300 ANP32CO43423 234 aa21.06■□□□□ 0.96
MRPL55-202ENST00000336300 AKAP4Q5JQC9 854 aa21.06■□□□□ 0.96
MRPL55-202ENST00000336300 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
MRPL55-202ENST00000336300 NBPF14Q5TI25 921 aa21.05■□□□□ 0.96
MRPL55-202ENST00000336300 PRKAR2BP31323 418 aa21.04■□□□□ 0.96
MRPL55-202ENST00000336300 GAS2L2Q8NHY3 880 aa21.04■□□□□ 0.96
MRPL55-202ENST00000336300 TMOD3Q9NYL9 352 aa21.04■□□□□ 0.96
MRPL55-202ENST00000336300 ERVV-2B6SEH9 535 aa21.03■□□□□ 0.96
MRPL55-202ENST00000336300 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
MRPL55-202ENST00000336300 RSPH6AQ9H0K4 717 aa21.03■□□□□ 0.96
MRPL55-202ENST00000336300 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
MRPL55-202ENST00000336300 TXNRD1Q16881 649 aa21.02■□□□□ 0.96
MRPL55-202ENST00000336300 DOT1LQ8TEK3 1739 aa21.01■□□□□ 0.95
MRPL55-202ENST00000336300 CABP4P57796 275 aa21.01■□□□□ 0.95
MRPL55-202ENST00000336300 SMARCC1Q92922 1105 aaPredicted RBP21.01■□□□□ 0.95
MRPL55-202ENST00000336300 WDR43Q15061 677 aaKnown RBP eCLIP20.99■□□□□ 0.95
MRPL55-202ENST00000336300 SLC27A3Q5K4L6 730 aa20.99■□□□□ 0.95
MRPL55-202ENST00000336300 PIGBQ92521 554 aa20.99■□□□□ 0.95
MRPL55-202ENST00000336300 BTAF1O14981 1849 aa20.99■□□□□ 0.95
MRPL55-202ENST00000336300 RGPD3A6NKT7 1758 aaPredicted RBP20.98■□□□□ 0.95
MRPL55-202ENST00000336300 RGPD4Q7Z3J3 1758 aa20.98■□□□□ 0.95
MRPL55-202ENST00000336300 PROM2Q8N271 834 aa20.98■□□□□ 0.95
MRPL55-202ENST00000336300 GNAT3A8MTJ3 354 aa20.97■□□□□ 0.95
MRPL55-202ENST00000336300 PHACTR3Q96KR7 559 aa20.97■□□□□ 0.95
MRPL55-202ENST00000336300 MAPK8IP3Q9UPT6 1336 aa20.96■□□□□ 0.95
MRPL55-202ENST00000336300 RTF1Q92541 710 aaKnown RBP20.95■□□□□ 0.94
MRPL55-202ENST00000336300 CCNL1Q9UK58 526 aaPredicted RBP20.95■□□□□ 0.94
MRPL55-202ENST00000336300 RNMTO43148 476 aaKnown RBP20.94■□□□□ 0.94
MRPL55-202ENST00000336300 NFATC2IPQ8NCF5 419 aa20.94■□□□□ 0.94
MRPL55-202ENST00000336300 STK32BQ9NY57 414 aa20.94■□□□□ 0.94
MRPL55-202ENST00000336300 PALLDQ8WX93 1383 aa20.94■□□□□ 0.94
MRPL55-202ENST00000336300 MAP3K5Q99683 1374 aa20.94■□□□□ 0.94
MRPL55-202ENST00000336300 KDM6AO15550 1401 aaPredicted RBP20.94■□□□□ 0.94
MRPL55-202ENST00000336300 LGR6Q9HBX8 967 aa20.93■□□□□ 0.94
MRPL55-202ENST00000336300 RREB1Q92766 1687 aa20.93■□□□□ 0.94
MRPL55-202ENST00000336300 R3HDM1Q15032 1099 aaKnown RBP20.92■□□□□ 0.94
MRPL55-202ENST00000336300 SLC52A2Q9HAB3 445 aa20.92■□□□□ 0.94
MRPL55-202ENST00000336300 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
MRPL55-202ENST00000336300 ITGB4P16144 1822 aa20.91■□□□□ 0.94
MRPL55-202ENST00000336300 TEFQ10587 303 aa20.91■□□□□ 0.94
MRPL55-202ENST00000336300 PLEKHF1Q96S99 279 aa20.91■□□□□ 0.94
MRPL55-202ENST00000336300 ASAP1Q9ULH1 1129 aa20.91■□□□□ 0.94
MRPL55-202ENST00000336300 PSDA5PKW4 1024 aaPredicted RBP20.9■□□□□ 0.94
MRPL55-202ENST00000336300 HTATSF1O43719 755 aaKnown RBP20.9■□□□□ 0.94
MRPL55-202ENST00000336300 ATG3Q9NT62 314 aa20.9■□□□□ 0.94
MRPL55-202ENST00000336300 LRRC4BQ9NT99 713 aa20.9■□□□□ 0.94
MRPL55-202ENST00000336300 NUP188Q5SRE5 1749 aa20.89■□□□□ 0.93
MRPL55-202ENST00000336300 LOC102724428A0A0B4J2F2 783 aa20.88■□□□□ 0.93
MRPL55-202ENST00000336300 SIK1P57059 783 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms