RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RSPH6AQ9H0K4 717 aa18.76■□□□□ 0.59
APOBEC3B-202ENST00000335760 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 EXOC5O00471 708 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 FCHSD2O94868 740 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 DDB1Q16531 1140 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 LRRC37A3O60309 1634 aa18.75■□□□□ 0.59
APOBEC3B-202ENST00000335760 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
APOBEC3B-202ENST00000335760 ZCRB1Q8TBF4 217 aaKnown RBP18.74■□□□□ 0.59
APOBEC3B-202ENST00000335760 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
APOBEC3B-202ENST00000335760 TNS2Q63HR2 1409 aa18.73■□□□□ 0.59
APOBEC3B-202ENST00000335760 BRWD3Q6RI45 1802 aa18.72■□□□□ 0.59
APOBEC3B-202ENST00000335760 PDE3BQ13370 1112 aa18.72■□□□□ 0.59
APOBEC3B-202ENST00000335760 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
APOBEC3B-202ENST00000335760 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
APOBEC3B-202ENST00000335760 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
APOBEC3B-202ENST00000335760 PKD1L3Q7Z443 1732 aa18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 AMOTQ4VCS5 1084 aa18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 DDX54Q8TDD1 881 aaKnown RBP18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
APOBEC3B-202ENST00000335760 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 PLEKHG2Q9H7P9 1386 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
APOBEC3B-202ENST00000335760 NEFMP07197 916 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 MARCH10Q8NA82 808 aaPredicted RBP18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 PCDH11XQ9BZA7 1347 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 PCDH11YQ9BZA8 1340 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 ZNF530Q6P9A1 599 aaPredicted RBP18.68■□□□□ 0.58
APOBEC3B-202ENST00000335760 CYP27B1O15528 508 aa18.66■□□□□ 0.58
APOBEC3B-202ENST00000335760 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
APOBEC3B-202ENST00000335760 RUNDC1Q96C34 613 aa18.66■□□□□ 0.58
APOBEC3B-202ENST00000335760 PHKG2P15735 406 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
APOBEC3B-202ENST00000335760 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
APOBEC3B-202ENST00000335760 NFE2L2Q16236 605 aa18.61■□□□□ 0.57
APOBEC3B-202ENST00000335760 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
APOBEC3B-202ENST00000335760 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
APOBEC3B-202ENST00000335760 NKX1-1Q15270 411 aaPredicted RBP18.6■□□□□ 0.57
APOBEC3B-202ENST00000335760 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
APOBEC3B-202ENST00000335760 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 APAF1O14727 1248 aa18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
APOBEC3B-202ENST00000335760 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.57
APOBEC3B-202ENST00000335760 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.57
APOBEC3B-202ENST00000335760 RIPK4P57078 832 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 DCAF5Q96JK2 942 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 BCL9O00512 1426 aa18.57■□□□□ 0.56
APOBEC3B-202ENST00000335760 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 DOT1LQ8TEK3 1739 aa18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 KDM6AO15550 1401 aaPredicted RBP18.56■□□□□ 0.56
APOBEC3B-202ENST00000335760 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 SBF2Q86WG5 1849 aa18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 TOGARAM1Q9Y4F4 1720 aa18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
APOBEC3B-202ENST00000335760 SCN11AQ9UI33 1791 aa18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
APOBEC3B-202ENST00000335760 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 KCNQ2O43526 872 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 TRIM37O94972 964 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 MCM10Q7L590 875 aa18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 SYTL4Q96C24 671 aaPredicted RBP18.53■□□□□ 0.56
APOBEC3B-202ENST00000335760 NHSQ6T4R5 1651 aa18.52■□□□□ 0.56
APOBEC3B-202ENST00000335760 ADAMTS7Q9UKP4 1686 aa18.52■□□□□ 0.56
APOBEC3B-202ENST00000335760 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.55
APOBEC3B-202ENST00000335760 CABP4P57796 275 aa18.52■□□□□ 0.55
APOBEC3B-202ENST00000335760 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.55
APOBEC3B-202ENST00000335760 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
APOBEC3B-202ENST00000335760 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
APOBEC3B-202ENST00000335760 ITGB4P16144 1822 aa18.51■□□□□ 0.55
APOBEC3B-202ENST00000335760 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 THUMPD2Q9BTF0 503 aaKnown RBP18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
APOBEC3B-202ENST00000335760 TEFQ10587 303 aa18.49■□□□□ 0.55
APOBEC3B-202ENST00000335760 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
APOBEC3B-202ENST00000335760 EP400Q96L91 3159 aa18.49■□□□□ 0.55
APOBEC3B-202ENST00000335760 PIGBQ92521 554 aa18.48■□□□□ 0.55
APOBEC3B-202ENST00000335760 SLC52A2Q9HAB3 445 aa18.48■□□□□ 0.55
APOBEC3B-202ENST00000335760 MRC1P22897 1456 aa18.48■□□□□ 0.55
APOBEC3B-202ENST00000335760 BTAF1O14981 1849 aa18.46■□□□□ 0.55
APOBEC3B-202ENST00000335760 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
APOBEC3B-202ENST00000335760 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms