RNA–Protein interactions for RNA: ENST00000335756.8

CENPA-202, Transcript of centromere protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CENPA, Length 1,452 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-202ENST00000335756 PRKRIP1Q9H875 184 aaPredicted RBP25.42■■□□□ 1.66
CENPA-202ENST00000335756 CCDC125Q86Z20 511 aa25.41■■□□□ 1.66
CENPA-202ENST00000335756 DDX54Q8TDD1 881 aaKnown RBP25.41■■□□□ 1.66
CENPA-202ENST00000335756 MYBBP1AQ9BQG0 1328 aaKnown RBP25.4■■□□□ 1.66
CENPA-202ENST00000335756 AEBP1Q8IUX7 1158 aa25.4■■□□□ 1.66
CENPA-202ENST00000335756 U2SURPO15042 1029 aaKnown RBP25.39■■□□□ 1.65
CENPA-202ENST00000335756 KDRP35968 1356 aa25.38■■□□□ 1.65
CENPA-202ENST00000335756 NUDCQ9Y266 331 aa25.38■■□□□ 1.65
CENPA-202ENST00000335756 BCL9O00512 1426 aa25.38■■□□□ 1.65
CENPA-202ENST00000335756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.37■■□□□ 1.65
CENPA-202ENST00000335756 SPG7Q9UQ90 795 aa25.37■■□□□ 1.65
CENPA-202ENST00000335756 PLEKHG2Q9H7P9 1386 aa25.37■■□□□ 1.65
CENPA-202ENST00000335756 HMOX1P09601 288 aa25.36■■□□□ 1.65
CENPA-202ENST00000335756 SF3B2Q13435 895 aaKnown RBP25.36■■□□□ 1.65
CENPA-202ENST00000335756 PCDH11XQ9BZA7 1347 aa25.36■■□□□ 1.65
CENPA-202ENST00000335756 PCDH11YQ9BZA8 1340 aa25.36■■□□□ 1.65
CENPA-202ENST00000335756 TRIM37O94972 964 aa25.35■■□□□ 1.65
CENPA-202ENST00000335756 SHANK3Q9BYB0 1731 aa25.35■■□□□ 1.65
CENPA-202ENST00000335756 PKD1L3Q7Z443 1732 aa25.35■■□□□ 1.65
CENPA-202ENST00000335756 AMOTQ4VCS5 1084 aa25.32■■□□□ 1.64
CENPA-202ENST00000335756 PLEKHO1Q53GL0 409 aaPredicted RBP25.32■■□□□ 1.64
CENPA-202ENST00000335756 CYP27B1O15528 508 aa25.31■■□□□ 1.64
CENPA-202ENST00000335756 ANP32CO43423 234 aa25.3■■□□□ 1.64
CENPA-202ENST00000335756 U2AF1L5P0DN76 240 aaPredicted RBP25.3■■□□□ 1.64
CENPA-202ENST00000335756 U2AF1Q01081 240 aaKnown RBP eCLIP25.3■■□□□ 1.64
CENPA-202ENST00000335756 SBF2Q86WG5 1849 aa25.3■■□□□ 1.64
CENPA-202ENST00000335756 ACSBG1Q96GR2 724 aa25.29■■□□□ 1.64
CENPA-202ENST00000335756 IFNL2Q8IZJ0 200 aa25.28■■□□□ 1.64
CENPA-202ENST00000335756 BCL11BQ9C0K0 894 aaPredicted RBP25.28■■□□□ 1.64
CENPA-202ENST00000335756 PHKG2P15735 406 aa25.27■■□□□ 1.64
CENPA-202ENST00000335756 TNS1Q9HBL0 1735 aaKnown RBP25.26■■□□□ 1.63
CENPA-202ENST00000335756 KCNQ2O43526 872 aa25.26■■□□□ 1.63
CENPA-202ENST00000335756 APBA3O96018 575 aa25.26■■□□□ 1.63
CENPA-202ENST00000335756 BAG6P46379 1132 aa25.26■■□□□ 1.63
CENPA-202ENST00000335756 NKX1-1Q15270 411 aaPredicted RBP25.25■■□□□ 1.63
CENPA-202ENST00000335756 ZNF530Q6P9A1 599 aaPredicted RBP25.25■■□□□ 1.63
CENPA-202ENST00000335756 FCHSD2O94868 740 aa25.24■■□□□ 1.63
CENPA-202ENST00000335756 PTF1AQ7RTS3 328 aa25.24■■□□□ 1.63
CENPA-202ENST00000335756 DEFB132Q7Z7B7 95 aa25.24■■□□□ 1.63
CENPA-202ENST00000335756 RSPH6AQ9H0K4 717 aa25.24■■□□□ 1.63
CENPA-202ENST00000335756 NHSQ6T4R5 1651 aa25.23■■□□□ 1.63
CENPA-202ENST00000335756 KAT6BQ8WYB5 2073 aa25.22■■□□□ 1.63
CENPA-202ENST00000335756 PRKAR2BP31323 418 aa25.22■■□□□ 1.63
CENPA-202ENST00000335756 PRIM1P49642 420 aaKnown RBP25.22■■□□□ 1.63
CENPA-202ENST00000335756 SYTL4Q96C24 671 aaPredicted RBP25.22■■□□□ 1.63
CENPA-202ENST00000335756 C1orf141Q5JVX7 400 aa25.21■■□□□ 1.63
CENPA-202ENST00000335756 DOT1LQ8TEK3 1739 aa25.21■■□□□ 1.63
CENPA-202ENST00000335756 HSP90AB1P08238 724 aaKnown RBP25.21■■□□□ 1.63
CENPA-202ENST00000335756 MTHFSDQ2M296 383 aaKnown RBP25.21■■□□□ 1.63
CENPA-202ENST00000335756 EN1Q05925 392 aaPredicted RBP25.2■■□□□ 1.62
CENPA-202ENST00000335756 AKAP4Q5JQC9 854 aa25.18■■□□□ 1.62
CENPA-202ENST00000335756 DCAF5Q96JK2 942 aa25.18■■□□□ 1.62
CENPA-202ENST00000335756 PLSCR1O15162 318 aa25.17■■□□□ 1.62
CENPA-202ENST00000335756 PHACTR3Q96KR7 559 aa25.17■■□□□ 1.62
CENPA-202ENST00000335756 GAS2L2Q8NHY3 880 aa25.16■■□□□ 1.62
CENPA-202ENST00000335756 CAMKK2Q96RR4 588 aa25.16■■□□□ 1.62
CENPA-202ENST00000335756 PNNQ9H307 717 aaKnown RBP25.16■■□□□ 1.62
CENPA-202ENST00000335756 WDR43Q15061 677 aaKnown RBP eCLIP25.15■■□□□ 1.62
CENPA-202ENST00000335756 EZH2Q15910 746 aaKnown RBP25.15■■□□□ 1.62
CENPA-202ENST00000335756 TOGARAM1Q9Y4F4 1720 aa25.15■■□□□ 1.62
CENPA-202ENST00000335756 NEFMP07197 916 aa25.15■■□□□ 1.62
CENPA-202ENST00000335756 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
CENPA-202ENST00000335756 BTAF1O14981 1849 aa25.14■■□□□ 1.62
CENPA-202ENST00000335756 KDM6AO15550 1401 aaPredicted RBP25.12■■□□□ 1.61
CENPA-202ENST00000335756 ERVV-2B6SEH9 535 aa25.12■■□□□ 1.61
CENPA-202ENST00000335756 CCDC184Q52MB2 194 aa25.12■■□□□ 1.61
CENPA-202ENST00000335756 PLEKHF1Q96S99 279 aa25.12■■□□□ 1.61
CENPA-202ENST00000335756 TMOD3Q9NYL9 352 aa25.11■■□□□ 1.61
CENPA-202ENST00000335756 ITGB4P16144 1822 aa25.1■■□□□ 1.61
CENPA-202ENST00000335756 RGPD3A6NKT7 1758 aaPredicted RBP25.1■■□□□ 1.61
CENPA-202ENST00000335756 RGPD4Q7Z3J3 1758 aa25.1■■□□□ 1.61
CENPA-202ENST00000335756 GNAT3A8MTJ3 354 aa25.09■■□□□ 1.61
CENPA-202ENST00000335756 PIGBQ92521 554 aa25.09■■□□□ 1.61
CENPA-202ENST00000335756 ADAMTS8Q9UP79 889 aa25.09■■□□□ 1.61
CENPA-202ENST00000335756 MAP3K5Q99683 1374 aa25.09■■□□□ 1.61
CENPA-202ENST00000335756 MAPK8IP3Q9UPT6 1336 aa25.09■■□□□ 1.61
CENPA-202ENST00000335756 CABP4P57796 275 aa25.09■■□□□ 1.61
CENPA-202ENST00000335756 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
CENPA-202ENST00000335756 LGR6Q9HBX8 967 aa25.08■■□□□ 1.6
CENPA-202ENST00000335756 RNMTO43148 476 aaKnown RBP25.07■■□□□ 1.6
CENPA-202ENST00000335756 SCN11AQ9UI33 1791 aa25.06■■□□□ 1.6
CENPA-202ENST00000335756 TXNRD1Q16881 649 aa25.06■■□□□ 1.6
CENPA-202ENST00000335756 PROM2Q8N271 834 aa25.06■■□□□ 1.6
CENPA-202ENST00000335756 RREB1Q92766 1687 aa25.04■■□□□ 1.6
CENPA-202ENST00000335756 NFATC2IPQ8NCF5 419 aa25.04■■□□□ 1.6
CENPA-202ENST00000335756 DIEXFQ68CQ4 756 aaKnown RBP25.03■■□□□ 1.6
CENPA-202ENST00000335756 SMARCC1Q92922 1105 aaPredicted RBP25.03■■□□□ 1.6
CENPA-202ENST00000335756 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
CENPA-202ENST00000335756 IL17REQ8NFR9 667 aa25.02■■□□□ 1.6
CENPA-202ENST00000335756 RTF1Q92541 710 aaKnown RBP25.02■■□□□ 1.6
CENPA-202ENST00000335756 RUNDC1Q96C34 613 aa25.02■■□□□ 1.6
CENPA-202ENST00000335756 SLC52A2Q9HAB3 445 aa25.02■■□□□ 1.6
CENPA-202ENST00000335756 ADAMTS7Q9UKP4 1686 aa25.02■■□□□ 1.6
CENPA-202ENST00000335756 PALLDQ8WX93 1383 aa25.02■■□□□ 1.6
CENPA-202ENST00000335756 NFE2L2Q16236 605 aa25.02■■□□□ 1.6
CENPA-202ENST00000335756 PNISRQ8TF01 805 aaKnown RBP25.02■■□□□ 1.6
CENPA-202ENST00000335756 VIRMAQ69YN4 1812 aaKnown RBP25.01■■□□□ 1.59
CENPA-202ENST00000335756 HTATSF1O43719 755 aaKnown RBP25.01■■□□□ 1.59
CENPA-202ENST00000335756 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
CENPA-202ENST00000335756 SLC27A3Q5K4L6 730 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms