RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 THEGQ9P2T0 379 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 RLBP1P12271 317 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 HSPA4P34932 840 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 RPGRQ92834 1020 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 GZF1Q9H116 711 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 HIP1RO75146 1068 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 PRPHP41219 470 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 CCDC148Q8NFR7 591 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 EFHD2Q96C19 240 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 USP25Q9UHP3 1055 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 ROCK1Q13464 1354 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 DTNBP1Q96EV8 351 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 SKILP12757 684 aa7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDC42BPA-201ENST00000334218 CFAP58Q5T655 872 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 LAMC3Q9Y6N6 1575 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 NFE2L2Q16236 605 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 SLC4A8Q2Y0W8 1093 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 C16orf45Q96MC5 204 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 DNAJC5BQ9UF47 199 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 ECM2O94769 699 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 NMIQ13287 307 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 ARMCX6Q7L4S7 300 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 IFT140Q96RY7 1462 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 BAG4O95429 457 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 KRT5P13647 590 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 PPP1R9BQ96SB3 815 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 DAAM1Q9Y4D1 1078 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 KIF7Q2M1P5 1343 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 MIER3Q7Z3K6 550 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 SELENOSQ9BQE4 189 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 BUB1BO60566 1050 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 EIF5P55010 431 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 NCAPGQ9BPX3 1015 aa7.09□□□□□ -1.27
CDC42BPA-201ENST00000334218 SSBP05455 408 aaKnown RBP eCLIP7.09□□□□□ -1.28
CDC42BPA-201ENST00000334218 FILIP1LQ4L180 1135 aa7.09□□□□□ -1.28
CDC42BPA-201ENST00000334218 IQCGQ9H095 443 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 MRPL46Q9H2W6 279 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 CCDC196A0A1B0GTZ2 297 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 TSC22D1Q15714 1073 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 LMNTD2Q8IXW0 634 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 METTL14Q9HCE5 456 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 TRIM17Q9Y577 477 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 PPP1R15AO75807 674 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 ZWINTO95229 277 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 SOGA3Q5TF21 947 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 ANKS4BQ8N8V4 417 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 FAM170AA1A519 330 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 SERPINI2O75830 405 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 POTEDQ86YR6 584 aa7.08□□□□□ -1.28
CDC42BPA-201ENST00000334218 PDE1CQ14123 709 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 EXOC1Q9NV70 894 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 BECN2A8MW95 431 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 ELL2O00472 640 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 TRIM60Q495X7 471 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 WWC2Q6AWC2 1192 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 FLOT2Q14254 428 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 SMC4Q9NTJ3 1288 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 PRIMPOLQ96LW4 560 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 CTAGE6Q86UF2 777 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 WDR63Q8IWG1 891 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 UQCRHLA0A096LP55 91 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 UQCRHP07919 91 aa7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 PSMC1P62191 440 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-201ENST00000334218 ST18O60284 1047 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 TUBBP07437 444 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 KRT7P08729 469 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 PLCB4Q15147 1175 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 PTPRGP23470 1445 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 A0A1B0GW55 424 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 NDC80O14777 642 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 DUX4L2P0CJ85 424 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 DUX4L3P0CJ86 424 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 DUX4L4P0CJ87 422 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 DUX4L5P0CJ88 424 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 DUX4L6P0CJ89 424 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 DUX4L7P0CJ90 424 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 TNIP1Q15025 636 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 FAM76AQ8TAV0 307 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 DUX4Q9UBX2 424 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 CTAGE9A4FU28 777 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 POLD1P28340 1107 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 BASP1P80723 227 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 PAIP2BQ9ULR5 123 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 hCG_2014768A0A024R1R8 64 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 PPP1R21Q6ZMI0 780 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 USP33Q8TEY7 942 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 PPFIBP1Q86W92 1011 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 TMEM57Q8N5G2 664 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 VCX3AQ9NNX9 186 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 TMCO3Q6UWJ1 677 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 KANK1Q14678 1352 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 SMARCC2Q8TAQ2 1214 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 ATRIPQ8WXE1 791 aa7.06□□□□□ -1.28
CDC42BPA-201ENST00000334218 CFTRP13569 1480 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 FOSBP53539 338 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms