RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 USHBP1Q8N6Y0 703 aa23.75■■□□□ 1.39
NELFA-201ENST00000333877 BRPF1P55201 1214 aaPredicted RBP23.75■■□□□ 1.39
NELFA-201ENST00000333877 ARHGEF25Q86VW2 580 aa23.75■■□□□ 1.39
NELFA-201ENST00000333877 CRB1P82279 1406 aa23.74■■□□□ 1.39
NELFA-201ENST00000333877 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
NELFA-201ENST00000333877 IGHDP01880 384 aa23.74■■□□□ 1.39
NELFA-201ENST00000333877 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
NELFA-201ENST00000333877 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
NELFA-201ENST00000333877 MRPL50Q8N5N7 158 aaKnown RBP23.73■■□□□ 1.39
NELFA-201ENST00000333877 NBPF6Q5VWK0 638 aa23.72■■□□□ 1.39
NELFA-201ENST00000333877 NBPF4Q96M43 638 aa23.72■■□□□ 1.39
NELFA-201ENST00000333877 HTATSF1O43719 755 aaKnown RBP23.7■■□□□ 1.38
NELFA-201ENST00000333877 ITPRIPQ8IWB1 547 aa23.7■■□□□ 1.38
NELFA-201ENST00000333877 GNAT3A8MTJ3 354 aa23.69■■□□□ 1.38
NELFA-201ENST00000333877 PCDHB15Q9Y5E8 787 aa23.69■■□□□ 1.38
NELFA-201ENST00000333877 TMEM57Q8N5G2 664 aa23.69■■□□□ 1.38
NELFA-201ENST00000333877 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
NELFA-201ENST00000333877 RGPD2P0DJD1 1756 aa23.69■■□□□ 1.38
NELFA-201ENST00000333877 DDX19BQ9UMR2 479 aa23.68■■□□□ 1.38
NELFA-201ENST00000333877 KRT24Q2M2I5 525 aa23.68■■□□□ 1.38
NELFA-201ENST00000333877 LRRC59Q96AG4 307 aaKnown RBP23.68■■□□□ 1.38
NELFA-201ENST00000333877 MIS18AQ9NYP9 233 aa23.68■■□□□ 1.38
NELFA-201ENST00000333877 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
NELFA-201ENST00000333877 KIAA0232Q92628 1395 aa23.67■■□□□ 1.38
NELFA-201ENST00000333877 ZNF335Q9H4Z2 1342 aaPredicted RBP23.67■■□□□ 1.38
NELFA-201ENST00000333877 MAP3K5Q99683 1374 aa23.67■■□□□ 1.38
NELFA-201ENST00000333877 ARHGAP45Q92619 1136 aa23.67■■□□□ 1.38
NELFA-201ENST00000333877 TSPYL4Q9UJ04 414 aa23.65■■□□□ 1.38
NELFA-201ENST00000333877 HAP1P54257 671 aaPredicted RBP23.65■■□□□ 1.38
NELFA-201ENST00000333877 ANKRD24Q8TF21 1146 aa23.65■■□□□ 1.38
NELFA-201ENST00000333877 LRRC37A3O60309 1634 aa23.65■■□□□ 1.38
NELFA-201ENST00000333877 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.38
NELFA-201ENST00000333877 AXIN2Q9Y2T1 843 aa23.64■■□□□ 1.38
NELFA-201ENST00000333877 IL17REQ8NFR9 667 aa23.63■■□□□ 1.37
NELFA-201ENST00000333877 TNS3Q68CZ2 1445 aa23.63■■□□□ 1.37
NELFA-201ENST00000333877 PXDNQ92626 1479 aa23.62■■□□□ 1.37
NELFA-201ENST00000333877 RWDD1Q9H446 243 aaPredicted RBP23.61■■□□□ 1.37
NELFA-201ENST00000333877 RGPD5Q99666 1765 aa23.61■■□□□ 1.37
NELFA-201ENST00000333877 PDE4AP27815 886 aa23.61■■□□□ 1.37
NELFA-201ENST00000333877 BRINP3Q76B58 766 aa23.61■■□□□ 1.37
NELFA-201ENST00000333877 RGS3P49796 1198 aa23.6■■□□□ 1.37
NELFA-201ENST00000333877 ZBTB40Q9NUA8 1239 aa23.59■■□□□ 1.37
NELFA-201ENST00000333877 NCAPD2Q15021 1401 aa23.59■■□□□ 1.37
NELFA-201ENST00000333877 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
NELFA-201ENST00000333877 CABLES1Q8TDN4 633 aa23.59■■□□□ 1.37
NELFA-201ENST00000333877 API5Q9BZZ5 524 aaKnown RBP23.58■■□□□ 1.37
NELFA-201ENST00000333877 ABCC4O15439 1325 aa23.58■■□□□ 1.37
NELFA-201ENST00000333877 BACH2Q9BYV9 841 aa23.57■■□□□ 1.36
NELFA-201ENST00000333877 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
NELFA-201ENST00000333877 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
NELFA-201ENST00000333877 TAF7Q15545 349 aaPredicted RBP23.56■■□□□ 1.36
NELFA-201ENST00000333877 PLEKHO1Q53GL0 409 aaPredicted RBP23.56■■□□□ 1.36
NELFA-201ENST00000333877 ERBB3P21860 1342 aa23.56■■□□□ 1.36
NELFA-201ENST00000333877 ZNF530Q6P9A1 599 aaPredicted RBP23.55■■□□□ 1.36
NELFA-201ENST00000333877 AMOTQ4VCS5 1084 aa23.54■■□□□ 1.36
NELFA-201ENST00000333877 BABAM1Q9NWV8 329 aa23.54■■□□□ 1.36
NELFA-201ENST00000333877 CEMIPQ8WUJ3 1361 aa23.54■■□□□ 1.36
NELFA-201ENST00000333877 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
NELFA-201ENST00000333877 HDAC1Q13547 482 aaPredicted RBP23.53■■□□□ 1.36
NELFA-201ENST00000333877 AKAP4Q5JQC9 854 aa23.53■■□□□ 1.36
NELFA-201ENST00000333877 CHMP4BQ9H444 224 aaKnown RBP23.53■■□□□ 1.36
NELFA-201ENST00000333877 LMO7Q8WWI1 1683 aa23.53■■□□□ 1.36
NELFA-201ENST00000333877 CRYBG1Q9Y4K1 1723 aa23.53■■□□□ 1.36
NELFA-201ENST00000333877 LGR6Q9HBX8 967 aa23.52■■□□□ 1.36
NELFA-201ENST00000333877 COL18A1P39060 1754 aa23.52■■□□□ 1.36
NELFA-201ENST00000333877 SLC4A2P04920 1241 aa23.52■■□□□ 1.36
NELFA-201ENST00000333877 PDZRN3Q9UPQ7 1066 aa23.5■■□□□ 1.35
NELFA-201ENST00000333877 PTPRCP08575 1304 aa23.5■■□□□ 1.35
NELFA-201ENST00000333877 CHRNA2Q15822 529 aa23.49■■□□□ 1.35
NELFA-201ENST00000333877 C1orf141Q5JVX7 400 aa23.49■■□□□ 1.35
NELFA-201ENST00000333877 NLRP2Q9NX02 1062 aa23.49■■□□□ 1.35
NELFA-201ENST00000333877 RGS12O14924 1447 aa23.49■■□□□ 1.35
NELFA-201ENST00000333877 SOS2Q07890 1332 aaPredicted RBP23.48■■□□□ 1.35
NELFA-201ENST00000333877 MPRIPQ6WCQ1 1025 aa23.48■■□□□ 1.35
NELFA-201ENST00000333877 ABCC6O95255 1503 aa23.46■■□□□ 1.35
NELFA-201ENST00000333877 CSB-PGBD3P0DP91 1061 aa23.46■■□□□ 1.35
NELFA-201ENST00000333877 FAM161AQ3B820 660 aa23.46■■□□□ 1.35
NELFA-201ENST00000333877 INTS3Q68E01 1043 aaKnown RBP23.46■■□□□ 1.35
NELFA-201ENST00000333877 STK31Q9BXU1 1019 aa23.46■■□□□ 1.35
NELFA-201ENST00000333877 CPDO75976 1380 aa23.46■■□□□ 1.35
NELFA-201ENST00000333877 SOS1Q07889 1333 aaPredicted RBP23.46■■□□□ 1.35
NELFA-201ENST00000333877 TEFQ10587 303 aa23.45■■□□□ 1.35
NELFA-201ENST00000333877 CCDC30Q5VVM6 783 aa23.45■■□□□ 1.34
NELFA-201ENST00000333877 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
NELFA-201ENST00000333877 C1orf115Q9H7X2 142 aa23.45■■□□□ 1.34
NELFA-201ENST00000333877 RNMTO43148 476 aaKnown RBP23.44■■□□□ 1.34
NELFA-201ENST00000333877 G2E3Q7L622 706 aa23.44■■□□□ 1.34
NELFA-201ENST00000333877 VIRMAQ69YN4 1812 aaKnown RBP23.44■■□□□ 1.34
NELFA-201ENST00000333877 FAM208AQ9UK61 1670 aaKnown RBP23.43■■□□□ 1.34
NELFA-201ENST00000333877 C8orf34Q49A92 452 aa23.43■■□□□ 1.34
NELFA-201ENST00000333877 NECTIN2Q92692 538 aa23.43■■□□□ 1.34
NELFA-201ENST00000333877 ANP32AP39687 249 aaKnown RBP23.43■■□□□ 1.34
NELFA-201ENST00000333877 SMC5Q8IY18 1101 aa23.43■■□□□ 1.34
NELFA-201ENST00000333877 KDM3BQ7LBC6 1761 aa23.43■■□□□ 1.34
NELFA-201ENST00000333877 OVOS2A0A0G2JMS6 1433 aa23.41■■□□□ 1.34
NELFA-201ENST00000333877 BTBD11A6QL63 1104 aa23.41■■□□□ 1.34
NELFA-201ENST00000333877 TATP17735 454 aaPredicted RBP23.41■■□□□ 1.34
NELFA-201ENST00000333877 MSH5O43196 834 aa23.4■■□□□ 1.34
NELFA-201ENST00000333877 EIF4A1P60842 406 aaKnown RBP23.4■■□□□ 1.34
NELFA-201ENST00000333877 NPM2Q86SE8 214 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms