RNA–Protein interactions for RNA: ENST00000333651.10

HMG20B-202, Transcript of high mobility group 20B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20B, Length 1,596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-202ENST00000333651 NUDCQ9Y266 331 aa31.78■■■□□ 2.68
HMG20B-202ENST00000333651 DDX54Q8TDD1 881 aaKnown RBP31.77■■■□□ 2.68
HMG20B-202ENST00000333651 AEBP1Q8IUX7 1158 aa31.77■■■□□ 2.68
HMG20B-202ENST00000333651 UPF1Q92900 1129 aaKnown RBP eCLIP31.76■■■□□ 2.672e-7■■■■□ 19.3
HMG20B-202ENST00000333651 ANP32CO43423 234 aa31.73■■■□□ 2.67
HMG20B-202ENST00000333651 HMOX1P09601 288 aa31.73■■■□□ 2.67
HMG20B-202ENST00000333651 SPG7Q9UQ90 795 aa31.73■■■□□ 2.67
HMG20B-202ENST00000333651 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.73■■■□□ 2.672e-6■■□□□ 11.9
HMG20B-202ENST00000333651 RGPD1P0DJD0 1748 aa31.72■■■□□ 2.67
HMG20B-202ENST00000333651 KDRP35968 1356 aa31.72■■■□□ 2.67
HMG20B-202ENST00000333651 CCDC125Q86Z20 511 aa31.71■■■□□ 2.67
HMG20B-202ENST00000333651 EP400Q96L91 3159 aa31.7■■■□□ 2.66
HMG20B-202ENST00000333651 PCDH11XQ9BZA7 1347 aa31.69■■■□□ 2.66
HMG20B-202ENST00000333651 PCDH11YQ9BZA8 1340 aa31.69■■■□□ 2.66
HMG20B-202ENST00000333651 PLEKHG2Q9H7P9 1386 aa31.68■■■□□ 2.66
HMG20B-202ENST00000333651 U2AF1L5P0DN76 240 aaPredicted RBP31.68■■■□□ 2.66
HMG20B-202ENST00000333651 U2AF1Q01081 240 aaKnown RBP eCLIP31.68■■■□□ 2.66
HMG20B-202ENST00000333651 PLEKHO1Q53GL0 409 aaPredicted RBP31.68■■■□□ 2.66
HMG20B-202ENST00000333651 AMOTQ4VCS5 1084 aa31.67■■■□□ 2.66
HMG20B-202ENST00000333651 TRIM37O94972 964 aa31.66■■■□□ 2.66
HMG20B-202ENST00000333651 SF3B2Q13435 895 aaKnown RBP31.66■■■□□ 2.66
HMG20B-202ENST00000333651 BCL9O00512 1426 aa31.66■■■□□ 2.66
HMG20B-202ENST00000333651 CYP27B1O15528 508 aa31.64■■■□□ 2.65
HMG20B-202ENST00000333651 IFNL2Q8IZJ0 200 aa31.61■■■□□ 2.65
HMG20B-202ENST00000333651 FCHSD2O94868 740 aa31.6■■■□□ 2.65
HMG20B-202ENST00000333651 PKD1L3Q7Z443 1732 aa31.6■■■□□ 2.65
HMG20B-202ENST00000333651 ACSBG1Q96GR2 724 aa31.59■■■□□ 2.65
HMG20B-202ENST00000333651 SHANK3Q9BYB0 1731 aa31.59■■■□□ 2.65
HMG20B-202ENST00000333651 PHKG2P15735 406 aa31.58■■■□□ 2.65
HMG20B-202ENST00000333651 ZNF530Q6P9A1 599 aaPredicted RBP31.58■■■□□ 2.65
HMG20B-202ENST00000333651 BCL11BQ9C0K0 894 aaPredicted RBP31.58■■■□□ 2.65
HMG20B-202ENST00000333651 RSPH6AQ9H0K4 717 aa31.58■■■□□ 2.65
HMG20B-202ENST00000333651 PRKAR2BP31323 418 aa31.57■■■□□ 2.64
HMG20B-202ENST00000333651 NKX1-1Q15270 411 aaPredicted RBP31.56■■■□□ 2.64
HMG20B-202ENST00000333651 C1orf141Q5JVX7 400 aa31.56■■■□□ 2.64
HMG20B-202ENST00000333651 KCNQ2O43526 872 aa31.55■■■□□ 2.64
HMG20B-202ENST00000333651 APBA3O96018 575 aa31.54■■■□□ 2.64
HMG20B-202ENST00000333651 KAT6BQ8WYB5 2073 aa31.53■■■□□ 2.64
HMG20B-202ENST00000333651 SYTL4Q96C24 671 aaPredicted RBP31.53■■■□□ 2.64
HMG20B-202ENST00000333651 HSP90AB1P08238 724 aaKnown RBP31.52■■■□□ 2.64
HMG20B-202ENST00000333651 BAG6P46379 1132 aa31.52■■■□□ 2.64
HMG20B-202ENST00000333651 PRIM1P49642 420 aaKnown RBP31.52■■■□□ 2.64
HMG20B-202ENST00000333651 MTHFSDQ2M296 383 aaKnown RBP31.52■■■□□ 2.64
HMG20B-202ENST00000333651 PTF1AQ7RTS3 328 aa31.52■■■□□ 2.64
HMG20B-202ENST00000333651 WDR43Q15061 677 aaKnown RBP eCLIP31.51■■■□□ 2.64
HMG20B-202ENST00000333651 PNNQ9H307 717 aaKnown RBP31.51■■■□□ 2.64
HMG20B-202ENST00000333651 SBF2Q86WG5 1849 aa31.51■■■□□ 2.64
HMG20B-202ENST00000333651 PHACTR3Q96KR7 559 aa31.51■■■□□ 2.63
HMG20B-202ENST00000333651 NEFMP07197 916 aa31.5■■■□□ 2.63
HMG20B-202ENST00000333651 DEFB132Q7Z7B7 95 aa31.5■■■□□ 2.63
HMG20B-202ENST00000333651 AKAP4Q5JQC9 854 aa31.49■■■□□ 2.63
HMG20B-202ENST00000333651 GAS2L2Q8NHY3 880 aa31.48■■■□□ 2.63
HMG20B-202ENST00000333651 DCAF5Q96JK2 942 aa31.48■■■□□ 2.63
HMG20B-202ENST00000333651 EN1Q05925 392 aaPredicted RBP31.46■■■□□ 2.63
HMG20B-202ENST00000333651 CCDC184Q52MB2 194 aa31.46■■■□□ 2.63
HMG20B-202ENST00000333651 MPRIPQ6WCQ1 1025 aa31.44■■■□□ 2.62
HMG20B-202ENST00000333651 MRS2Q9HD23 443 aa31.44■■■□□ 2.62
HMG20B-202ENST00000333651 TNS1Q9HBL0 1735 aaKnown RBP31.44■■■□□ 2.62
HMG20B-202ENST00000333651 DIEXFQ68CQ4 756 aaKnown RBP31.43■■■□□ 2.62
HMG20B-202ENST00000333651 PLEKHF1Q96S99 279 aa31.43■■■□□ 2.62
HMG20B-202ENST00000333651 ADAMTS8Q9UP79 889 aa31.43■■■□□ 2.62
HMG20B-202ENST00000333651 NHSQ6T4R5 1651 aa31.43■■■□□ 2.62
HMG20B-202ENST00000333651 PLSCR1O15162 318 aa31.43■■■□□ 2.62
HMG20B-202ENST00000333651 DOT1LQ8TEK3 1739 aa31.42■■■□□ 2.62
HMG20B-202ENST00000333651 ERVV-2B6SEH9 535 aa31.41■■■□□ 2.62
HMG20B-202ENST00000333651 CAMKK2Q96RR4 588 aa31.4■■■□□ 2.62
HMG20B-202ENST00000333651 MAPK8IP3Q9UPT6 1336 aa31.4■■■□□ 2.62
HMG20B-202ENST00000333651 GNAT3A8MTJ3 354 aa31.39■■■□□ 2.62
HMG20B-202ENST00000333651 TMOD3Q9NYL9 352 aa31.39■■■□□ 2.62
HMG20B-202ENST00000333651 EZH2Q15910 746 aaKnown RBP31.39■■■□□ 2.61
HMG20B-202ENST00000333651 KDM6AO15550 1401 aaPredicted RBP31.38■■■□□ 2.61
HMG20B-202ENST00000333651 CABP4P57796 275 aa31.37■■■□□ 2.61
HMG20B-202ENST00000333651 PIGBQ92521 554 aa31.37■■■□□ 2.61
HMG20B-202ENST00000333651 LGR6Q9HBX8 967 aa31.37■■■□□ 2.61
HMG20B-202ENST00000333651 MAP3K5Q99683 1374 aa31.36■■■□□ 2.61
HMG20B-202ENST00000333651 RNMTO43148 476 aaKnown RBP31.35■■■□□ 2.61
HMG20B-202ENST00000333651 PNISRQ8TF01 805 aaKnown RBP31.34■■■□□ 2.61
HMG20B-202ENST00000333651 TOGARAM1Q9Y4F4 1720 aa31.34■■■□□ 2.61
HMG20B-202ENST00000333651 BTAF1O14981 1849 aa31.34■■■□□ 2.61
HMG20B-202ENST00000333651 CCDC146Q8IYE0 955 aa31.34■■■□□ 2.61
HMG20B-202ENST00000333651 NFATC2IPQ8NCF5 419 aa31.33■■■□□ 2.61
HMG20B-202ENST00000333651 RUNDC1Q96C34 613 aa31.33■■■□□ 2.61
HMG20B-202ENST00000333651 RTF1Q92541 710 aaKnown RBP31.32■■■□□ 2.6
HMG20B-202ENST00000333651 NFE2L2Q16236 605 aa31.31■■■□□ 2.6
HMG20B-202ENST00000333651 ITGB4P16144 1822 aa31.31■■■□□ 2.6
HMG20B-202ENST00000333651 IL17REQ8NFR9 667 aa31.3■■■□□ 2.6
HMG20B-202ENST00000333651 HTATSF1O43719 755 aaKnown RBP31.29■■■□□ 2.6
HMG20B-202ENST00000333651 TXNRD1Q16881 649 aa31.29■■■□□ 2.6
HMG20B-202ENST00000333651 PROM2Q8N271 834 aa31.29■■■□□ 2.6
HMG20B-202ENST00000333651 SMARCC1Q92922 1105 aaPredicted RBP31.29■■■□□ 2.6
HMG20B-202ENST00000333651 SLC52A2Q9HAB3 445 aa31.29■■■□□ 2.6
HMG20B-202ENST00000333651 SCN11AQ9UI33 1791 aa31.27■■■□□ 2.6
HMG20B-202ENST00000333651 ASAP1Q9ULH1 1129 aa31.26■■■□□ 2.6
HMG20B-202ENST00000333651 TEFQ10587 303 aa31.26■■■□□ 2.59
HMG20B-202ENST00000333651 TMPOP42166 694 aaKnown RBP31.25■■■□□ 2.59
HMG20B-202ENST00000333651 RIPK4P57078 832 aa31.25■■■□□ 2.59
HMG20B-202ENST00000333651 MCM10Q7L590 875 aa31.25■■■□□ 2.59
HMG20B-202ENST00000333651 RGPD3A6NKT7 1758 aaPredicted RBP31.24■■■□□ 2.59
HMG20B-202ENST00000333651 RGPD4Q7Z3J3 1758 aa31.24■■■□□ 2.59
HMG20B-202ENST00000333651 PALLDQ8WX93 1383 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms