RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 CRACR2AQ9BSW2 395 aa13.81□□□□□ -0.2
SCN5A-202ENST00000333535 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
SCN5A-202ENST00000333535 ERBINQ96RT1 1412 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 PDCL3Q9H2J4 239 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 FGFR1OPO95684 399 aaKnown RBP13.8□□□□□ -0.2
SCN5A-202ENST00000333535 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 CETN2P41208 172 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 HDGFL1Q5TGJ6 251 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 KIF18AQ8NI77 898 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 CENPHQ9H3R5 247 aa13.8□□□□□ -0.2
SCN5A-202ENST00000333535 SHTN1A0MZ66 631 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 CTAGE5O15320 804 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 UBXN4Q92575 508 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
SCN5A-202ENST00000333535 ZSCAN30Q86W11 494 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 NKTRP30414 1462 aaKnown RBP13.79□□□□□ -0.2
SCN5A-202ENST00000333535 CABP4P57796 275 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 SKIDA1Q1XH10 827 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 POGZQ7Z3K3 1410 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 GOLGA6L10A0A0M3HER8 536 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 SLC52A1Q9NWF4 448 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 IQGAP2Q13576 1575 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
SCN5A-202ENST00000333535 CEBPZQ03701 1054 aaKnown RBP13.78□□□□□ -0.2
SCN5A-202ENST00000333535 ANKRD62A6NC57 917 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 MICALCLQ6ZW33 695 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 CCDC83Q8IWF9 413 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 TANGO6Q9C0B7 1094 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 ARHGAP29Q52LW3 1261 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 THEMISQ8N1K5 641 aaPredicted RBP13.78□□□□□ -0.2
SCN5A-202ENST00000333535 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 TMCO3Q6UWJ1 677 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
SCN5A-202ENST00000333535 NEMFO60524 1076 aa13.77□□□□□ -0.2
SCN5A-202ENST00000333535 PRKAR2BP31323 418 aa13.77□□□□□ -0.2
SCN5A-202ENST00000333535 MCM4P33991 863 aa13.77□□□□□ -0.2
SCN5A-202ENST00000333535 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.2
SCN5A-202ENST00000333535 CALCOCO1Q9P1Z2 691 aa13.77□□□□□ -0.2
SCN5A-202ENST00000333535 TAF4BQ92750 862 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 CGNQ9P2M7 1197 aaKnown RBP13.77□□□□□ -0.21
SCN5A-202ENST00000333535 POTEB2H3BUK9 544 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 KIF5CO60282 957 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 RAB11FIP3O75154 756 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 CASQ1P31415 396 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 VPS36Q86VN1 386 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
SCN5A-202ENST00000333535 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 UBAC1Q9BSL1 405 aa13.77□□□□□ -0.21
SCN5A-202ENST00000333535 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
SCN5A-202ENST00000333535 PTPN14Q15678 1187 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
SCN5A-202ENST00000333535 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 CFTRP13569 1480 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 RBM10P98175 930 aaKnown RBP13.76□□□□□ -0.21
SCN5A-202ENST00000333535 TNIP1Q15025 636 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 IGF1RP08069 1367 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 PDRG1Q9NUG6 133 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 CAVIN2O95810 425 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCN5A-202ENST00000333535 TAX1BP1Q86VP1 789 aa13.76□□□□□ -0.21
SCN5A-202ENST00000333535 MCM5P33992 734 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 FEZ1Q99689 392 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 DHX29Q7Z478 1369 aaKnown RBP13.75□□□□□ -0.21
SCN5A-202ENST00000333535 ANKRD30BQ9BXX2 1392 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
SCN5A-202ENST00000333535 RPGRIP1LQ68CZ1 1315 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 SPA17Q15506 151 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 SCAND2PQ9GZW5 306 aaPredicted RBP13.75□□□□□ -0.21
SCN5A-202ENST00000333535 CCDC196A0A1B0GTZ2 297 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 GOLGA6L9A6NEM1 432 aa13.75□□□□□ -0.21
SCN5A-202ENST00000333535 HMGB1P09429 215 aaKnown RBP13.75□□□□□ -0.21
SCN5A-202ENST00000333535 MAP2K1Q02750 393 aaPredicted RBP13.75□□□□□ -0.21
SCN5A-202ENST00000333535 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
SCN5A-202ENST00000333535 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 SH2B1Q9NRF2 756 aaPredicted RBP13.74□□□□□ -0.21
SCN5A-202ENST00000333535 ANO10Q9NW15 660 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 TDO2P48775 406 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 STAMBPO95630 424 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 RTEL1-TNFRSF6BF6WH68 1400 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 ATP2B1P20020 1258 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
SCN5A-202ENST00000333535 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 SEC63Q9UGP8 760 aaKnown RBP13.74□□□□□ -0.21
SCN5A-202ENST00000333535 GSDMDP57764 484 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
SCN5A-202ENST00000333535 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
SCN5A-202ENST00000333535 FAM177A1Q8N128 213 aaPredicted RBP13.73□□□□□ -0.21
SCN5A-202ENST00000333535 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms