RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 RGPD2P0DJD1 1756 aa16.76■□□□□ 0.27
CMTM1-203ENST00000333001 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
CMTM1-203ENST00000333001 RREB1Q92766 1687 aa16.75■□□□□ 0.27
CMTM1-203ENST00000333001 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
CMTM1-203ENST00000333001 KCNQ2O43526 872 aa16.73■□□□□ 0.27
CMTM1-203ENST00000333001 PTF1AQ7RTS3 328 aa16.73■□□□□ 0.27
CMTM1-203ENST00000333001 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
CMTM1-203ENST00000333001 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
CMTM1-203ENST00000333001 NHSQ6T4R5 1651 aa16.72■□□□□ 0.27
CMTM1-203ENST00000333001 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
CMTM1-203ENST00000333001 MEGF6O75095 1541 aa16.71■□□□□ 0.27
CMTM1-203ENST00000333001 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.27
CMTM1-203ENST00000333001 TXNRD1Q16881 649 aa16.71■□□□□ 0.27
CMTM1-203ENST00000333001 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
CMTM1-203ENST00000333001 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
CMTM1-203ENST00000333001 YY1P25490 414 aa16.7■□□□□ 0.26
CMTM1-203ENST00000333001 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
CMTM1-203ENST00000333001 PROM2Q8N271 834 aa16.69■□□□□ 0.26
CMTM1-203ENST00000333001 EYA1Q99502 592 aa16.69■□□□□ 0.26
CMTM1-203ENST00000333001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.69■□□□□ 0.26
CMTM1-203ENST00000333001 SPG7Q9UQ90 795 aa16.69■□□□□ 0.26
CMTM1-203ENST00000333001 HMGB2P26583 209 aaKnown RBP16.68■□□□□ 0.26
CMTM1-203ENST00000333001 EIF4A2Q14240 407 aaKnown RBP16.68■□□□□ 0.26
CMTM1-203ENST00000333001 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
CMTM1-203ENST00000333001 PLEKHG2Q9H7P9 1386 aa16.67■□□□□ 0.26
CMTM1-203ENST00000333001 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-203ENST00000333001 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
CMTM1-203ENST00000333001 SYTL4Q96C24 671 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-203ENST00000333001 BTAF1O14981 1849 aa16.66■□□□□ 0.26
CMTM1-203ENST00000333001 SLC27A3Q5K4L6 730 aa16.66■□□□□ 0.26
CMTM1-203ENST00000333001 STK32BQ9NY57 414 aa16.66■□□□□ 0.26
CMTM1-203ENST00000333001 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
CMTM1-203ENST00000333001 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.26
CMTM1-203ENST00000333001 CYP27B1O15528 508 aa16.63■□□□□ 0.25
CMTM1-203ENST00000333001 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
CMTM1-203ENST00000333001 IGSF1Q8N6C5 1336 aa16.63■□□□□ 0.25
CMTM1-203ENST00000333001 NKX1-1Q15270 411 aaPredicted RBP16.62■□□□□ 0.25
CMTM1-203ENST00000333001 PKD1L3Q7Z443 1732 aa16.62■□□□□ 0.25
CMTM1-203ENST00000333001 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
CMTM1-203ENST00000333001 CC2D1BQ5T0F9 858 aaKnown RBP16.61■□□□□ 0.25
CMTM1-203ENST00000333001 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
CMTM1-203ENST00000333001 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-203ENST00000333001 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
CMTM1-203ENST00000333001 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
CMTM1-203ENST00000333001 HSP90AB1P08238 724 aaKnown RBP16.59■□□□□ 0.25
CMTM1-203ENST00000333001 MTHFSP49914 203 aa16.59■□□□□ 0.25
CMTM1-203ENST00000333001 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
CMTM1-203ENST00000333001 UTRNP46939 3433 aa16.58■□□□□ 0.24
CMTM1-203ENST00000333001 IL13P35225 146 aa16.58■□□□□ 0.24
CMTM1-203ENST00000333001 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
CMTM1-203ENST00000333001 PHKG2P15735 406 aa16.57■□□□□ 0.24
CMTM1-203ENST00000333001 LRRC4BQ9NT99 713 aa16.57■□□□□ 0.24
CMTM1-203ENST00000333001 CCNL1Q9UK58 526 aaPredicted RBP16.57■□□□□ 0.24
CMTM1-203ENST00000333001 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
CMTM1-203ENST00000333001 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
CMTM1-203ENST00000333001 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
CMTM1-203ENST00000333001 LY75O60449 1722 aa16.55■□□□□ 0.24
CMTM1-203ENST00000333001 KDRP35968 1356 aa16.54■□□□□ 0.24
CMTM1-203ENST00000333001 ZBTB7AO95365 584 aa16.54■□□□□ 0.24
CMTM1-203ENST00000333001 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
CMTM1-203ENST00000333001 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
CMTM1-203ENST00000333001 ITGB4P16144 1822 aa16.54■□□□□ 0.24
CMTM1-203ENST00000333001 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 C1orf141Q5JVX7 400 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 PIGBQ92521 554 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 TFCP2L1Q9NZI6 479 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 CASZ1Q86V15 1759 aa16.53■□□□□ 0.24
CMTM1-203ENST00000333001 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
CMTM1-203ENST00000333001 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.24
CMTM1-203ENST00000333001 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
CMTM1-203ENST00000333001 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
CMTM1-203ENST00000333001 CFAP53Q96M91 514 aa16.51■□□□□ 0.23
CMTM1-203ENST00000333001 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-203ENST00000333001 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-203ENST00000333001 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-203ENST00000333001 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
CMTM1-203ENST00000333001 KCNQ4P56696 695 aa16.49■□□□□ 0.23
CMTM1-203ENST00000333001 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
CMTM1-203ENST00000333001 FLAD1Q8NFF5 587 aa16.49■□□□□ 0.23
CMTM1-203ENST00000333001 CABP4P57796 275 aa16.48■□□□□ 0.23
CMTM1-203ENST00000333001 LOC102724428A0A0B4J2F2 783 aa16.47■□□□□ 0.23
CMTM1-203ENST00000333001 SIK1P57059 783 aa16.47■□□□□ 0.23
CMTM1-203ENST00000333001 AKAP4Q5JQC9 854 aa16.47■□□□□ 0.23
CMTM1-203ENST00000333001 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
CMTM1-203ENST00000333001 HMOX1P09601 288 aa16.46■□□□□ 0.23
CMTM1-203ENST00000333001 PTGER2P43116 358 aa16.46■□□□□ 0.23
CMTM1-203ENST00000333001 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
CMTM1-203ENST00000333001 NUDCQ9Y266 331 aa16.46■□□□□ 0.23
CMTM1-203ENST00000333001 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
CMTM1-203ENST00000333001 FHDC1Q9C0D6 1143 aaPredicted RBP16.45■□□□□ 0.22
CMTM1-203ENST00000333001 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
CMTM1-203ENST00000333001 C5P01031 1676 aa16.44■□□□□ 0.22
CMTM1-203ENST00000333001 POLD1P28340 1107 aa16.44■□□□□ 0.22
CMTM1-203ENST00000333001 PPP2R1AP30153 589 aa16.44■□□□□ 0.22
CMTM1-203ENST00000333001 ATP6V1AP38606 617 aa16.44■□□□□ 0.22
CMTM1-203ENST00000333001 AK7Q96M32 723 aa16.44■□□□□ 0.22
CMTM1-203ENST00000333001 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms