RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 FAM208AQ9UK61 1670 aaKnown RBP25.93■■□□□ 1.74
SUMO3-201ENST00000332859 BCAR3O75815 825 aa25.93■■□□□ 1.74
SUMO3-201ENST00000332859 MCM10Q7L590 875 aa25.92■■□□□ 1.74
SUMO3-201ENST00000332859 CHRNA2Q15822 529 aa25.91■■□□□ 1.74
SUMO3-201ENST00000332859 MAP3K5Q99683 1374 aa25.91■■□□□ 1.74
SUMO3-201ENST00000332859 GNAT3A8MTJ3 354 aa25.9■■□□□ 1.74
SUMO3-201ENST00000332859 CRBNQ96SW2 442 aa25.9■■□□□ 1.74
SUMO3-201ENST00000332859 MBIPQ9NS73 344 aa25.9■■□□□ 1.74
SUMO3-201ENST00000332859 PRDM11Q9NQV5 511 aa25.88■■□□□ 1.73
SUMO3-201ENST00000332859 CRB1P82279 1406 aa25.88■■□□□ 1.73
SUMO3-201ENST00000332859 CSB-PGBD3P0DP91 1061 aa25.87■■□□□ 1.73
SUMO3-201ENST00000332859 PLEKHO1Q53GL0 409 aaPredicted RBP25.87■■□□□ 1.73
SUMO3-201ENST00000332859 LRRC37A3O60309 1634 aa25.87■■□□□ 1.73
SUMO3-201ENST00000332859 AMOTQ4VCS5 1084 aa25.86■■□□□ 1.73
SUMO3-201ENST00000332859 NLRP2Q9NX02 1062 aa25.86■■□□□ 1.73
SUMO3-201ENST00000332859 TOM1O60784 492 aa25.85■■□□□ 1.73
SUMO3-201ENST00000332859 CANXP27824 592 aaKnown RBP25.85■■□□□ 1.73
SUMO3-201ENST00000332859 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
SUMO3-201ENST00000332859 ZNF428Q96B54 188 aa25.85■■□□□ 1.73
SUMO3-201ENST00000332859 CHL1O00533 1208 aa25.84■■□□□ 1.73
SUMO3-201ENST00000332859 C20orf194Q5TEA3 1177 aa25.84■■□□□ 1.73
SUMO3-201ENST00000332859 COL22A1Q8NFW1 1626 aaPredicted RBP25.83■■□□□ 1.73
SUMO3-201ENST00000332859 PLEKHG2Q9H7P9 1386 aa25.82■■□□□ 1.72
SUMO3-201ENST00000332859 BCL2L13Q9BXK5 485 aa25.81■■□□□ 1.72
SUMO3-201ENST00000332859 SMC4Q9NTJ3 1288 aa25.81■■□□□ 1.72
SUMO3-201ENST00000332859 PDE3AQ14432 1141 aa25.81■■□□□ 1.72
SUMO3-201ENST00000332859 ALDH1L2Q3SY69 923 aa25.81■■□□□ 1.72
SUMO3-201ENST00000332859 ZNF530Q6P9A1 599 aaPredicted RBP25.81■■□□□ 1.72
SUMO3-201ENST00000332859 RAPGEF4Q8WZA2 1011 aa25.81■■□□□ 1.72
SUMO3-201ENST00000332859 PHLPP1O60346 1717 aa25.8■■□□□ 1.72
SUMO3-201ENST00000332859 AKAP4Q5JQC9 854 aa25.8■■□□□ 1.72
SUMO3-201ENST00000332859 FRAT1Q92837 279 aaPredicted RBP25.8■■□□□ 1.72
SUMO3-201ENST00000332859 SSH1Q8WYL5 1049 aa25.79■■□□□ 1.72
SUMO3-201ENST00000332859 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
SUMO3-201ENST00000332859 WDR17Q8IZU2 1322 aa25.78■■□□□ 1.72
SUMO3-201ENST00000332859 COL16A1Q07092 1604 aaPredicted RBP25.78■■□□□ 1.72
SUMO3-201ENST00000332859 VAMP4O75379 141 aa25.78■■□□□ 1.72
SUMO3-201ENST00000332859 TATP17735 454 aaPredicted RBP25.78■■□□□ 1.72
SUMO3-201ENST00000332859 TWISTNBQ3B726 338 aaPredicted RBP25.78■■□□□ 1.72
SUMO3-201ENST00000332859 IL17REQ8NFR9 667 aa25.78■■□□□ 1.72
SUMO3-201ENST00000332859 C1orf141Q5JVX7 400 aa25.77■■□□□ 1.72
SUMO3-201ENST00000332859 TSPYL4Q9UJ04 414 aa25.77■■□□□ 1.72
SUMO3-201ENST00000332859 CEMIPQ8WUJ3 1361 aa25.76■■□□□ 1.71
SUMO3-201ENST00000332859 TSPYL6Q8N831 410 aa25.76■■□□□ 1.71
SUMO3-201ENST00000332859 C8orf58Q8NAV2 365 aa25.76■■□□□ 1.71
SUMO3-201ENST00000332859 BABAM1Q9NWV8 329 aa25.76■■□□□ 1.71
SUMO3-201ENST00000332859 TCERG1O14776 1098 aaKnown RBP25.75■■□□□ 1.71
SUMO3-201ENST00000332859 KIF16BQ96L93 1317 aa25.75■■□□□ 1.71
SUMO3-201ENST00000332859 ZKSCAN2Q63HK3 967 aa25.74■■□□□ 1.71
SUMO3-201ENST00000332859 MEGF6O75095 1541 aa25.74■■□□□ 1.71
SUMO3-201ENST00000332859 OVOS2A0A0G2JMS6 1433 aa25.74■■□□□ 1.71
SUMO3-201ENST00000332859 PIP4K2BP78356 416 aa25.74■■□□□ 1.71
SUMO3-201ENST00000332859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.74■■□□□ 1.71
SUMO3-201ENST00000332859 BRPF1P55201 1214 aaPredicted RBP25.73■■□□□ 1.71
SUMO3-201ENST00000332859 ELL2O00472 640 aaPredicted RBP25.72■■□□□ 1.71
SUMO3-201ENST00000332859 MS4A1P11836 297 aa25.72■■□□□ 1.71
SUMO3-201ENST00000332859 TAF7Q15545 349 aaPredicted RBP25.72■■□□□ 1.71
SUMO3-201ENST00000332859 SPG7Q9UQ90 795 aa25.72■■□□□ 1.71
SUMO3-201ENST00000332859 COL14A1Q05707 1796 aaKnown RBP25.72■■□□□ 1.71
SUMO3-201ENST00000332859 UBAP1LF5GYI3 381 aa25.72■■□□□ 1.71
SUMO3-201ENST00000332859 TOM1L2Q6ZVM7 507 aa25.72■■□□□ 1.71
SUMO3-201ENST00000332859 MIS18AQ9NYP9 233 aa25.71■■□□□ 1.71
SUMO3-201ENST00000332859 IPO8O15397 1037 aaKnown RBP25.7■■□□□ 1.7
SUMO3-201ENST00000332859 EVA1CP58658 441 aa25.7■■□□□ 1.7
SUMO3-201ENST00000332859 PANK1Q8TE04 598 aa25.7■■□□□ 1.7
SUMO3-201ENST00000332859 PKD1L3Q7Z443 1732 aa25.7■■□□□ 1.7
SUMO3-201ENST00000332859 RNMTO43148 476 aaKnown RBP25.69■■□□□ 1.7
SUMO3-201ENST00000332859 CARD10Q9BWT7 1032 aa25.69■■□□□ 1.7
SUMO3-201ENST00000332859 LGR6Q9HBX8 967 aa25.69■■□□□ 1.7
SUMO3-201ENST00000332859 PARP4Q9UKK3 1724 aaKnown RBP25.68■■□□□ 1.7
SUMO3-201ENST00000332859 CENPQQ7L2Z9 268 aaPredicted RBP25.68■■□□□ 1.7
SUMO3-201ENST00000332859 NOB1Q9ULX3 412 aaKnown RBP25.68■■□□□ 1.7
SUMO3-201ENST00000332859 KDM2BQ8NHM5 1336 aa25.68■■□□□ 1.7
SUMO3-201ENST00000332859 ADAMTS7Q9UKP4 1686 aa25.68■■□□□ 1.7
SUMO3-201ENST00000332859 MPRIPQ6WCQ1 1025 aa25.67■■□□□ 1.7
SUMO3-201ENST00000332859 MRPL50Q8N5N7 158 aaKnown RBP25.67■■□□□ 1.7
SUMO3-201ENST00000332859 STRN4Q9NRL3 753 aa25.67■■□□□ 1.7
SUMO3-201ENST00000332859 TEFQ10587 303 aa25.67■■□□□ 1.7
SUMO3-201ENST00000332859 ATF7IPQ6VMQ6 1270 aa25.67■■□□□ 1.7
SUMO3-201ENST00000332859 KRT24Q2M2I5 525 aa25.66■■□□□ 1.7
SUMO3-201ENST00000332859 FTSJ3Q8IY81 847 aaKnown RBP25.66■■□□□ 1.7
SUMO3-201ENST00000332859 DZIP1LQ8IYY4 767 aaKnown RBP25.66■■□□□ 1.7
SUMO3-201ENST00000332859 COG6Q9Y2V7 657 aa25.65■■□□□ 1.7
SUMO3-201ENST00000332859 VIRMAQ69YN4 1812 aaKnown RBP25.65■■□□□ 1.7
SUMO3-201ENST00000332859 TRIM27P14373 513 aa25.65■■□□□ 1.7
SUMO3-201ENST00000332859 LARP1Q6PKG0 1096 aaKnown RBP25.65■■□□□ 1.7
SUMO3-201ENST00000332859 TNNQ9UQP3 1299 aa25.65■■□□□ 1.7
SUMO3-201ENST00000332859 SOS1Q07889 1333 aaPredicted RBP25.64■■□□□ 1.7
SUMO3-201ENST00000332859 PHKG2P15735 406 aa25.64■■□□□ 1.7
SUMO3-201ENST00000332859 IFNL2Q8IZJ0 200 aa25.64■■□□□ 1.7
SUMO3-201ENST00000332859 BTG4Q9NY30 223 aa25.64■■□□□ 1.7
SUMO3-201ENST00000332859 RLBP1P12271 317 aa25.63■■□□□ 1.69
SUMO3-201ENST00000332859 CLUAP1Q96AJ1 413 aa25.63■■□□□ 1.69
SUMO3-201ENST00000332859 KDM3BQ7LBC6 1761 aa25.63■■□□□ 1.69
SUMO3-201ENST00000332859 ARHGAP45Q92619 1136 aa25.63■■□□□ 1.69
SUMO3-201ENST00000332859 AAMPQ13685 434 aa25.62■■□□□ 1.69
SUMO3-201ENST00000332859 IL2RBP14784 551 aa25.6■■□□□ 1.69
SUMO3-201ENST00000332859 SCN11AQ9UI33 1791 aa25.6■■□□□ 1.69
SUMO3-201ENST00000332859 HSP90AB1P08238 724 aaKnown RBP25.6■■□□□ 1.69
SUMO3-201ENST00000332859 MVPQ14764 893 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms