RNA–Protein interactions for RNA: ENST00000331491.1

HIST2H3D-201, Transcript of histone cluster 2 H3 family member d, humanhuman

APPRIS P1 BASIC

Gene HIST2H3D, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3D-201ENST00000331491 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
HIST2H3D-201ENST00000331491 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
HIST2H3D-201ENST00000331491 HOXC9P31274 260 aa23.18■■□□□ 1.3
HIST2H3D-201ENST00000331491 KCNQ4P56696 695 aa23.18■■□□□ 1.3
HIST2H3D-201ENST00000331491 SYTL4Q96C24 671 aaPredicted RBP23.18■■□□□ 1.3
HIST2H3D-201ENST00000331491 KLHL34Q8N239 644 aa23.17■■□□□ 1.3
HIST2H3D-201ENST00000331491 COG3Q96JB2 828 aa23.17■■□□□ 1.3
HIST2H3D-201ENST00000331491 MEGF6O75095 1541 aa23.17■■□□□ 1.3
HIST2H3D-201ENST00000331491 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
HIST2H3D-201ENST00000331491 TESK2Q96S53 571 aa23.15■■□□□ 1.3
HIST2H3D-201ENST00000331491 RGPD2P0DJD1 1756 aa23.14■■□□□ 1.3
HIST2H3D-201ENST00000331491 AMPHP49418 695 aa23.14■■□□□ 1.29
HIST2H3D-201ENST00000331491 NLGN2Q8NFZ4 835 aa23.14■■□□□ 1.29
HIST2H3D-201ENST00000331491 FBLN1P23142 703 aa23.13■■□□□ 1.29
HIST2H3D-201ENST00000331491 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
HIST2H3D-201ENST00000331491 RTL1A6NKG5 1358 aa23.13■■□□□ 1.29
HIST2H3D-201ENST00000331491 CEP350Q5VT06 3117 aa23.13■■□□□ 1.29
HIST2H3D-201ENST00000331491 PELP1Q8IZL8 1130 aaKnown RBP23.12■■□□□ 1.29
HIST2H3D-201ENST00000331491 TONSLQ96HA7 1378 aa23.11■■□□□ 1.29
HIST2H3D-201ENST00000331491 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
HIST2H3D-201ENST00000331491 GIGYF1O75420 1035 aaPredicted RBP23.1■■□□□ 1.29
HIST2H3D-201ENST00000331491 USP47Q96K76 1375 aa23.1■■□□□ 1.29
HIST2H3D-201ENST00000331491 NBPF6Q5VWK0 638 aa23.09■■□□□ 1.29
HIST2H3D-201ENST00000331491 COL23A1Q86Y22 540 aaPredicted RBP23.09■■□□□ 1.29
HIST2H3D-201ENST00000331491 NBPF4Q96M43 638 aa23.09■■□□□ 1.29
HIST2H3D-201ENST00000331491 ST20-MTHFSA0A0A6YYL1 179 aa23.08■■□□□ 1.29
HIST2H3D-201ENST00000331491 SLC24A1O60721 1099 aa23.08■■□□□ 1.29
HIST2H3D-201ENST00000331491 GRIN3BO60391 1043 aa23.07■■□□□ 1.28
HIST2H3D-201ENST00000331491 YBX3P16989 372 aaKnown RBP eCLIP23.07■■□□□ 1.283e-26■□□□□ 10.5
HIST2H3D-201ENST00000331491 RRS1Q15050 365 aaKnown RBP23.06■■□□□ 1.28
HIST2H3D-201ENST00000331491 C5P01031 1676 aa23.04■■□□□ 1.28
HIST2H3D-201ENST00000331491 FYB1O15117 783 aa23.04■■□□□ 1.28
HIST2H3D-201ENST00000331491 MSH5O43196 834 aa23.04■■□□□ 1.28
HIST2H3D-201ENST00000331491 USHBP1Q8N6Y0 703 aa23.04■■□□□ 1.28
HIST2H3D-201ENST00000331491 RAPGEF4Q8WZA2 1011 aa23.04■■□□□ 1.28
HIST2H3D-201ENST00000331491 SMG6Q86US8 1419 aaKnown RBP23.04■■□□□ 1.28
HIST2H3D-201ENST00000331491 GGNBP2Q9H3C7 697 aa23.02■■□□□ 1.28
HIST2H3D-201ENST00000331491 TATP17735 454 aaPredicted RBP23.01■■□□□ 1.27
HIST2H3D-201ENST00000331491 HMGB2P26583 209 aaKnown RBP23.01■■□□□ 1.27
HIST2H3D-201ENST00000331491 MSL1Q68DK7 614 aa23.01■■□□□ 1.27
HIST2H3D-201ENST00000331491 PCDH11XQ9BZA7 1347 aa23.01■■□□□ 1.27
HIST2H3D-201ENST00000331491 PCDH11YQ9BZA8 1340 aa23.01■■□□□ 1.27
HIST2H3D-201ENST00000331491 INSRP06213 1382 aa23.01■■□□□ 1.27
HIST2H3D-201ENST00000331491 FLAD1Q8NFF5 587 aa23■■□□□ 1.27
HIST2H3D-201ENST00000331491 CD2APQ9Y5K6 639 aa23■■□□□ 1.27
HIST2H3D-201ENST00000331491 TAF1LQ8IZX4 1826 aa23■■□□□ 1.27
HIST2H3D-201ENST00000331491 PALLDQ8WX93 1383 aa23■■□□□ 1.27
HIST2H3D-201ENST00000331491 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
HIST2H3D-201ENST00000331491 KIF24Q5T7B8 1368 aa22.98■■□□□ 1.27
HIST2H3D-201ENST00000331491 FLT4P35916 1363 aa22.97■■□□□ 1.27
HIST2H3D-201ENST00000331491 CYP27B1O15528 508 aa22.96■■□□□ 1.27
HIST2H3D-201ENST00000331491 ATP10DQ9P241 1426 aa22.96■■□□□ 1.27
HIST2H3D-201ENST00000331491 MPRIPQ6WCQ1 1025 aa22.95■■□□□ 1.26
HIST2H3D-201ENST00000331491 TOGARAM1Q9Y4F4 1720 aa22.95■■□□□ 1.26
HIST2H3D-201ENST00000331491 C4BP0C0L5 1744 aa22.94■■□□□ 1.26
HIST2H3D-201ENST00000331491 TMF1P82094 1093 aa22.94■■□□□ 1.26
HIST2H3D-201ENST00000331491 KIF20BQ96Q89 1820 aa22.94■■□□□ 1.26
HIST2H3D-201ENST00000331491 ITGB4P16144 1822 aa22.93■■□□□ 1.26
HIST2H3D-201ENST00000331491 ADCY9O60503 1353 aa22.92■■□□□ 1.26
HIST2H3D-201ENST00000331491 PKD1L3Q7Z443 1732 aa22.92■■□□□ 1.26
HIST2H3D-201ENST00000331491 AMIGO3Q86WK7 504 aa22.92■■□□□ 1.26
HIST2H3D-201ENST00000331491 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
HIST2H3D-201ENST00000331491 NCAPD2Q15021 1401 aa22.91■■□□□ 1.26
HIST2H3D-201ENST00000331491 UBR3Q6ZT12 1888 aa22.91■■□□□ 1.26
HIST2H3D-201ENST00000331491 AK7Q96M32 723 aa22.9■■□□□ 1.26
HIST2H3D-201ENST00000331491 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.25
HIST2H3D-201ENST00000331491 PIGBQ92521 554 aa22.89■■□□□ 1.25
HIST2H3D-201ENST00000331491 NSD3Q9BZ95 1437 aa22.89■■□□□ 1.25
HIST2H3D-201ENST00000331491 MAP2P11137 1827 aaKnown RBP22.88■■□□□ 1.25
HIST2H3D-201ENST00000331491 GPBP1L1Q9HC44 474 aaPredicted RBP22.88■■□□□ 1.25
HIST2H3D-201ENST00000331491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.87■■□□□ 1.25
HIST2H3D-201ENST00000331491 EMILIN1Q9Y6C2 1016 aa22.87■■□□□ 1.25
HIST2H3D-201ENST00000331491 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
HIST2H3D-201ENST00000331491 IFFO2Q5TF58 517 aa22.86■■□□□ 1.25
HIST2H3D-201ENST00000331491 IGSF1Q8N6C5 1336 aa22.85■■□□□ 1.25
HIST2H3D-201ENST00000331491 PHF14O94880 888 aa22.85■■□□□ 1.25
HIST2H3D-201ENST00000331491 SSFA2P28290 1259 aa22.85■■□□□ 1.25
HIST2H3D-201ENST00000331491 CARD14Q9BXL6 1004 aa22.85■■□□□ 1.25
HIST2H3D-201ENST00000331491 SMIM5Q71RC9 77 aa22.84■■□□□ 1.25
HIST2H3D-201ENST00000331491 ANKRD26Q9UPS8 1709 aa22.84■■□□□ 1.25
HIST2H3D-201ENST00000331491 LOC102724428A0A0B4J2F2 783 aa22.83■■□□□ 1.25
HIST2H3D-201ENST00000331491 SIK1P57059 783 aa22.83■■□□□ 1.25
HIST2H3D-201ENST00000331491 LINC00116Q8NCU8 138 aa22.83■■□□□ 1.25
HIST2H3D-201ENST00000331491 SPG7Q9UQ90 795 aa22.83■■□□□ 1.25
HIST2H3D-201ENST00000331491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.82■■□□□ 1.24
HIST2H3D-201ENST00000331491 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
HIST2H3D-201ENST00000331491 HSPA6P17066 643 aa22.8■■□□□ 1.24
HIST2H3D-201ENST00000331491 ZNF526Q8TF50 670 aaPredicted RBP22.8■■□□□ 1.24
HIST2H3D-201ENST00000331491 EYA1Q99502 592 aa22.79■■□□□ 1.24
HIST2H3D-201ENST00000331491 TMOD3Q9NYL9 352 aa22.79■■□□□ 1.24
HIST2H3D-201ENST00000331491 ITPK1Q13572 414 aa22.78■■□□□ 1.24
HIST2H3D-201ENST00000331491 WWC3Q9ULE0 1092 aa22.78■■□□□ 1.24
HIST2H3D-201ENST00000331491 ASAP1Q9ULH1 1129 aa22.78■■□□□ 1.24
HIST2H3D-201ENST00000331491 CICQ96RK0 1608 aaPredicted RBP22.78■■□□□ 1.24
HIST2H3D-201ENST00000331491 PPM1GO15355 546 aaPredicted RBP22.77■■□□□ 1.24
HIST2H3D-201ENST00000331491 GNPATO15228 680 aa22.76■■□□□ 1.23
HIST2H3D-201ENST00000331491 PHKG2P15735 406 aa22.76■■□□□ 1.23
HIST2H3D-201ENST00000331491 IFNL2Q8IZJ0 200 aa22.76■■□□□ 1.23
HIST2H3D-201ENST00000331491 ATP6V1AP38606 617 aa22.75■■□□□ 1.23
HIST2H3D-201ENST00000331491 KIF13BQ9NQT8 1826 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms