RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
GDF3-201ENST00000329913 CARD11Q9BXL7 1154 aa13.38□□□□□ -0.27
GDF3-201ENST00000329913 MTFR1LQ9H019 292 aa13.38□□□□□ -0.27
GDF3-201ENST00000329913 A0A1W2PP64 1363 aa13.37□□□□□ -0.27
GDF3-201ENST00000329913 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
GDF3-201ENST00000329913 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
GDF3-201ENST00000329913 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
GDF3-201ENST00000329913 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
GDF3-201ENST00000329913 ARXQ96QS3 562 aa13.36□□□□□ -0.27
GDF3-201ENST00000329913 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
GDF3-201ENST00000329913 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
GDF3-201ENST00000329913 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
GDF3-201ENST00000329913 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
GDF3-201ENST00000329913 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
GDF3-201ENST00000329913 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
GDF3-201ENST00000329913 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
GDF3-201ENST00000329913 NLGN2Q8NFZ4 835 aa13.32□□□□□ -0.28
GDF3-201ENST00000329913 DOT1LQ8TEK3 1739 aa13.32□□□□□ -0.28
GDF3-201ENST00000329913 PNPLA7Q6ZV29 1317 aa13.32□□□□□ -0.28
GDF3-201ENST00000329913 MEGF6O75095 1541 aa13.31□□□□□ -0.28
GDF3-201ENST00000329913 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
GDF3-201ENST00000329913 FKBP8Q14318 412 aa13.31□□□□□ -0.28
GDF3-201ENST00000329913 GPR162Q16538 588 aa13.31□□□□□ -0.28
GDF3-201ENST00000329913 MSL1Q68DK7 614 aa13.31□□□□□ -0.28
GDF3-201ENST00000329913 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
GDF3-201ENST00000329913 MAP3K19Q56UN5 1328 aa13.31□□□□□ -0.28
GDF3-201ENST00000329913 RRS1Q15050 365 aaKnown RBP13.3□□□□□ -0.28
GDF3-201ENST00000329913 IP6K1Q92551 441 aa13.3□□□□□ -0.28
GDF3-201ENST00000329913 NSD2O96028 1365 aa13.3□□□□□ -0.28
GDF3-201ENST00000329913 FAM208AQ9UK61 1670 aaKnown RBP13.29□□□□□ -0.28
GDF3-201ENST00000329913 HOXC9P31274 260 aa13.29□□□□□ -0.28
GDF3-201ENST00000329913 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
GDF3-201ENST00000329913 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
GDF3-201ENST00000329913 SHANK3Q9BYB0 1731 aa13.29□□□□□ -0.28
GDF3-201ENST00000329913 CEP350Q5VT06 3117 aa13.29□□□□□ -0.28
GDF3-201ENST00000329913 AMPHP49418 695 aa13.28□□□□□ -0.28
GDF3-201ENST00000329913 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
GDF3-201ENST00000329913 TONSLQ96HA7 1378 aa13.28□□□□□ -0.28
GDF3-201ENST00000329913 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
GDF3-201ENST00000329913 SMIM5Q71RC9 77 aa13.27□□□□□ -0.29
GDF3-201ENST00000329913 POLD1P28340 1107 aa13.26□□□□□ -0.29
GDF3-201ENST00000329913 COG3Q96JB2 828 aa13.26□□□□□ -0.29
GDF3-201ENST00000329913 GGNBP2Q9H3C7 697 aa13.26□□□□□ -0.29
GDF3-201ENST00000329913 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
GDF3-201ENST00000329913 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
GDF3-201ENST00000329913 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
GDF3-201ENST00000329913 NBPF6Q5VWK0 638 aa13.25□□□□□ -0.29
GDF3-201ENST00000329913 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
GDF3-201ENST00000329913 NBPF4Q96M43 638 aa13.25□□□□□ -0.29
GDF3-201ENST00000329913 TESK2Q96S53 571 aa13.25□□□□□ -0.29
GDF3-201ENST00000329913 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
GDF3-201ENST00000329913 CHD4Q14839 1912 aa13.24□□□□□ -0.29
GDF3-201ENST00000329913 C1QTNF8P60827 252 aa13.24□□□□□ -0.29
GDF3-201ENST00000329913 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
GDF3-201ENST00000329913 LY75O60449 1722 aa13.23□□□□□ -0.29
GDF3-201ENST00000329913 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
GDF3-201ENST00000329913 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
GDF3-201ENST00000329913 HSP90AB2PQ58FF8 381 aa13.21□□□□□ -0.29
GDF3-201ENST00000329913 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.3
GDF3-201ENST00000329913 USP47Q96K76 1375 aa13.2□□□□□ -0.3
GDF3-201ENST00000329913 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
GDF3-201ENST00000329913 FYB1O15117 783 aa13.19□□□□□ -0.3
GDF3-201ENST00000329913 PHF14O94880 888 aa13.19□□□□□ -0.3
GDF3-201ENST00000329913 MPRIPQ6WCQ1 1025 aa13.19□□□□□ -0.3
GDF3-201ENST00000329913 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
GDF3-201ENST00000329913 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
GDF3-201ENST00000329913 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
GDF3-201ENST00000329913 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
GDF3-201ENST00000329913 C5P01031 1676 aa13.18□□□□□ -0.3
GDF3-201ENST00000329913 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
GDF3-201ENST00000329913 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
GDF3-201ENST00000329913 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
GDF3-201ENST00000329913 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
GDF3-201ENST00000329913 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
GDF3-201ENST00000329913 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
GDF3-201ENST00000329913 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
GDF3-201ENST00000329913 ATP10DQ9P241 1426 aa13.16□□□□□ -0.3
GDF3-201ENST00000329913 CYP27B1O15528 508 aa13.16□□□□□ -0.3
GDF3-201ENST00000329913 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
GDF3-201ENST00000329913 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
GDF3-201ENST00000329913 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
GDF3-201ENST00000329913 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
GDF3-201ENST00000329913 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
GDF3-201ENST00000329913 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
GDF3-201ENST00000329913 AK7Q96M32 723 aa13.13□□□□□ -0.31
GDF3-201ENST00000329913 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
GDF3-201ENST00000329913 CARD14Q9BXL6 1004 aa13.13□□□□□ -0.31
GDF3-201ENST00000329913 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
GDF3-201ENST00000329913 INSRP06213 1382 aa13.12□□□□□ -0.31
GDF3-201ENST00000329913 FLT4P35916 1363 aa13.12□□□□□ -0.31
GDF3-201ENST00000329913 TAF1LQ8IZX4 1826 aa13.12□□□□□ -0.31
GDF3-201ENST00000329913 TMF1P82094 1093 aa13.12□□□□□ -0.31
GDF3-201ENST00000329913 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
GDF3-201ENST00000329913 PIGBQ92521 554 aa13.12□□□□□ -0.31
GDF3-201ENST00000329913 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
GDF3-201ENST00000329913 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
GDF3-201ENST00000329913 ITGB4P16144 1822 aa13.11□□□□□ -0.31
GDF3-201ENST00000329913 IGSF1Q8N6C5 1336 aa13.11□□□□□ -0.31
GDF3-201ENST00000329913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
GDF3-201ENST00000329913 GRIN3BO60391 1043 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms