RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 DDX54Q8TDD1 881 aaKnown RBP29.48■■■□□ 2.31
TNRC18-201ENST00000328270 CAMKK2Q96RR4 588 aa29.48■■■□□ 2.31
TNRC18-201ENST00000328270 BCL11BQ9C0K0 894 aaPredicted RBP29.48■■■□□ 2.31
TNRC18-201ENST00000328270 PARD3Q8TEW0 1356 aa29.48■■■□□ 2.31
TNRC18-201ENST00000328270 TATP17735 454 aaPredicted RBP29.47■■■□□ 2.31
TNRC18-201ENST00000328270 PTF1AQ7RTS3 328 aa29.47■■■□□ 2.31
TNRC18-201ENST00000328270 ZCRB1Q8TBF4 217 aaKnown RBP29.47■■■□□ 2.31
TNRC18-201ENST00000328270 PKD1L3Q7Z443 1732 aa29.46■■■□□ 2.31
TNRC18-201ENST00000328270 EYA1Q99502 592 aa29.46■■■□□ 2.31
TNRC18-201ENST00000328270 NUP188Q5SRE5 1749 aa29.45■■■□□ 2.31
TNRC18-201ENST00000328270 DOT1LQ8TEK3 1739 aa29.44■■■□□ 2.3
TNRC18-201ENST00000328270 BTAF1O14981 1849 aa29.43■■■□□ 2.3
TNRC18-201ENST00000328270 ACSBG1Q96GR2 724 aa29.43■■■□□ 2.3
TNRC18-201ENST00000328270 CNGB1Q14028 1251 aaPredicted RBP29.42■■■□□ 2.3
TNRC18-201ENST00000328270 KCNQ2O43526 872 aa29.41■■■□□ 2.3
TNRC18-201ENST00000328270 IGSF1Q8N6C5 1336 aa29.39■■■□□ 2.3
TNRC18-201ENST00000328270 PLSCR1O15162 318 aa29.38■■■□□ 2.29
TNRC18-201ENST00000328270 MTHFSP49914 203 aa29.37■■■□□ 2.29
TNRC18-201ENST00000328270 PCDH11XQ9BZA7 1347 aa29.37■■■□□ 2.29
TNRC18-201ENST00000328270 PCDH11YQ9BZA8 1340 aa29.37■■■□□ 2.29
TNRC18-201ENST00000328270 ZEB1P37275 1124 aaPredicted RBP29.32■■■□□ 2.28
TNRC18-201ENST00000328270 CYP27B1O15528 508 aa29.31■■■□□ 2.28
TNRC18-201ENST00000328270 IL13P35225 146 aa29.31■■■□□ 2.28
TNRC18-201ENST00000328270 SPG7Q9UQ90 795 aa29.31■■■□□ 2.28
TNRC18-201ENST00000328270 TOGARAM1Q9Y4F4 1720 aa29.31■■■□□ 2.28
TNRC18-201ENST00000328270 PSDA5PKW4 1024 aaPredicted RBP29.3■■■□□ 2.28
TNRC18-201ENST00000328270 PLEKHG2Q9H7P9 1386 aa29.29■■■□□ 2.28
TNRC18-201ENST00000328270 PRIM1P49642 420 aaKnown RBP29.29■■■□□ 2.28
TNRC18-201ENST00000328270 SYTL4Q96C24 671 aaPredicted RBP29.29■■■□□ 2.28
TNRC18-201ENST00000328270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.29■■■□□ 2.28
TNRC18-201ENST00000328270 ITGB4P16144 1822 aa29.29■■■□□ 2.28
TNRC18-201ENST00000328270 SRCAPQ6ZRS2 3230 aa29.28■■■□□ 2.28
TNRC18-201ENST00000328270 R3HDM1Q15032 1099 aaKnown RBP29.27■■■□□ 2.28
TNRC18-201ENST00000328270 AEBP1Q8IUX7 1158 aa29.27■■■□□ 2.28
TNRC18-201ENST00000328270 PROM2Q8N271 834 aa29.27■■■□□ 2.28
TNRC18-201ENST00000328270 COL3A1P02461 1466 aaPredicted RBP29.26■■■□□ 2.27
TNRC18-201ENST00000328270 TXNRD1Q16881 649 aa29.26■■■□□ 2.27
TNRC18-201ENST00000328270 KDRP35968 1356 aa29.25■■■□□ 2.27
TNRC18-201ENST00000328270 NBPF14Q5TI25 921 aa29.24■■■□□ 2.27
TNRC18-201ENST00000328270 SULT6B1Q6IMI4 303 aa29.24■■■□□ 2.27
TNRC18-201ENST00000328270 DIAPH1O60610 1272 aaKnown RBP29.23■■■□□ 2.27
TNRC18-201ENST00000328270 LY75O60449 1722 aa29.23■■■□□ 2.27
TNRC18-201ENST00000328270 NKX1-1Q15270 411 aaPredicted RBP29.21■■■□□ 2.27
TNRC18-201ENST00000328270 PHKG2P15735 406 aa29.2■■■□□ 2.26
TNRC18-201ENST00000328270 IFNL2Q8IZJ0 200 aa29.2■■■□□ 2.26
TNRC18-201ENST00000328270 PLEKHO1Q53GL0 409 aaPredicted RBP29.19■■■□□ 2.26
TNRC18-201ENST00000328270 PPP2R1AP30153 589 aa29.18■■■□□ 2.26
TNRC18-201ENST00000328270 ANO8Q9HCE9 1232 aaPredicted RBP29.18■■■□□ 2.26
TNRC18-201ENST00000328270 PAPPAQ13219 1627 aa29.18■■■□□ 2.26
TNRC18-201ENST00000328270 AMOTQ4VCS5 1084 aa29.17■■■□□ 2.26
TNRC18-201ENST00000328270 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
TNRC18-201ENST00000328270 HMOX1P09601 288 aa29.15■■■□□ 2.26
TNRC18-201ENST00000328270 ZNF530Q6P9A1 599 aaPredicted RBP29.15■■■□□ 2.26
TNRC18-201ENST00000328270 LRP5O75197 1615 aa29.14■■■□□ 2.26
TNRC18-201ENST00000328270 MPRIPQ6WCQ1 1025 aa29.14■■■□□ 2.26
TNRC18-201ENST00000328270 CFAP53Q96M91 514 aa29.14■■■□□ 2.26
TNRC18-201ENST00000328270 LRRC4BQ9NT99 713 aa29.12■■■□□ 2.25
TNRC18-201ENST00000328270 VIRMAQ69YN4 1812 aaKnown RBP29.12■■■□□ 2.25
TNRC18-201ENST00000328270 U2SURPO15042 1029 aaKnown RBP29.11■■■□□ 2.25
TNRC18-201ENST00000328270 SLC27A3Q5K4L6 730 aa29.11■■■□□ 2.25
TNRC18-201ENST00000328270 STK32BQ9NY57 414 aa29.1■■■□□ 2.25
TNRC18-201ENST00000328270 CASZ1Q86V15 1759 aa29.09■■■□□ 2.25
TNRC18-201ENST00000328270 SCN11AQ9UI33 1791 aa29.09■■■□□ 2.25
TNRC18-201ENST00000328270 HSP90AB1P08238 724 aaKnown RBP29.09■■■□□ 2.25
TNRC18-201ENST00000328270 PIGBQ92521 554 aa29.09■■■□□ 2.25
TNRC18-201ENST00000328270 C1orf141Q5JVX7 400 aa29.08■■■□□ 2.25
TNRC18-201ENST00000328270 TMOD3Q9NYL9 352 aa29.08■■■□□ 2.25
TNRC18-201ENST00000328270 KDM6AO15550 1401 aaPredicted RBP29.08■■■□□ 2.25
TNRC18-201ENST00000328270 SLC15A2Q16348 729 aa29.07■■■□□ 2.24
TNRC18-201ENST00000328270 TAF1LQ8IZX4 1826 aa29.07■■■□□ 2.24
TNRC18-201ENST00000328270 PALLDQ8WX93 1383 aa29.07■■■□□ 2.24
TNRC18-201ENST00000328270 DCAF5Q96JK2 942 aa29.07■■■□□ 2.24
TNRC18-201ENST00000328270 KCNQ4P56696 695 aa29.06■■■□□ 2.24
TNRC18-201ENST00000328270 C5P01031 1676 aa29.05■■■□□ 2.24
TNRC18-201ENST00000328270 CCNL1Q9UK58 526 aaPredicted RBP29.05■■■□□ 2.24
TNRC18-201ENST00000328270 TUBGCP6Q96RT7 1819 aa29.05■■■□□ 2.24
TNRC18-201ENST00000328270 QSER1Q2KHR3 1735 aa29.03■■■□□ 2.24
TNRC18-201ENST00000328270 ERVV-2B6SEH9 535 aa29.03■■■□□ 2.24
TNRC18-201ENST00000328270 SMARCC1Q92922 1105 aaPredicted RBP29.03■■■□□ 2.24
TNRC18-201ENST00000328270 NUDCQ9Y266 331 aa29.03■■■□□ 2.24
TNRC18-201ENST00000328270 ZNF827Q17R98 1081 aa29.02■■■□□ 2.24
TNRC18-201ENST00000328270 AKAP4Q5JQC9 854 aa29.01■■■□□ 2.23
TNRC18-201ENST00000328270 MTHFSDQ2M296 383 aaKnown RBP29■■■□□ 2.23
TNRC18-201ENST00000328270 RALBP1Q15311 655 aa28.99■■■□□ 2.23
TNRC18-201ENST00000328270 AKT1S1Q96B36 256 aa28.99■■■□□ 2.23
TNRC18-201ENST00000328270 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
TNRC18-201ENST00000328270 ASAP1Q9ULH1 1129 aa28.99■■■□□ 2.23
TNRC18-201ENST00000328270 ADAMTS7Q9UKP4 1686 aa28.97■■■□□ 2.23
TNRC18-201ENST00000328270 U2AF1L5P0DN76 240 aaPredicted RBP28.97■■■□□ 2.23
TNRC18-201ENST00000328270 CABP4P57796 275 aa28.97■■■□□ 2.23
TNRC18-201ENST00000328270 U2AF1Q01081 240 aaKnown RBP eCLIP28.97■■■□□ 2.23
TNRC18-201ENST00000328270 RSPH6AQ9H0K4 717 aa28.97■■■□□ 2.23
TNRC18-201ENST00000328270 ATG3Q9NT62 314 aa28.96■■■□□ 2.23
TNRC18-201ENST00000328270 PRKAR2BP31323 418 aa28.95■■■□□ 2.22
TNRC18-201ENST00000328270 C4BP0C0L5 1744 aa28.94■■■□□ 2.22
TNRC18-201ENST00000328270 LOC102724428A0A0B4J2F2 783 aa28.93■■■□□ 2.22
TNRC18-201ENST00000328270 SIK1P57059 783 aa28.93■■■□□ 2.22
TNRC18-201ENST00000328270 MRC1P22897 1456 aa28.92■■■□□ 2.22
TNRC18-201ENST00000328270 GAS2L2Q8NHY3 880 aa28.92■■■□□ 2.22
TNRC18-201ENST00000328270 SPON1Q9HCB6 807 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms