RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 BCL2L12Q9HB09 334 aa15.56■□□□□ 0.08
CCDC60-201ENST00000327554 CAMSAP1Q5T5Y3 1602 aa15.56■□□□□ 0.08
CCDC60-201ENST00000327554 KIF24Q5T7B8 1368 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 REC8O95072 547 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 FGD1P98174 961 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 CASC1Q6TDU7 716 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 CFAP65Q6ZU64 1925 aaKnown RBP15.55■□□□□ 0.08
CCDC60-201ENST00000327554 ERCC6L2Q5T890 1561 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 FCHSD2O94868 740 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 LETM1O95202 739 aaPredicted RBP15.55■□□□□ 0.08
CCDC60-201ENST00000327554 FAM184AQ8NB25 1140 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 USP25Q9UHP3 1055 aa15.55■□□□□ 0.08
CCDC60-201ENST00000327554 LMTK2Q8IWU2 1503 aa15.54■□□□□ 0.08
CCDC60-201ENST00000327554 FYB1O15117 783 aa15.54■□□□□ 0.08
CCDC60-201ENST00000327554 GADD45BO75293 160 aaPredicted RBP15.54■□□□□ 0.08
CCDC60-201ENST00000327554 CHGAP10645 457 aaKnown RBP15.54■□□□□ 0.08
CCDC60-201ENST00000327554 CUL4AQ13619 759 aa15.54■□□□□ 0.08
CCDC60-201ENST00000327554 THUMPD2Q9BTF0 503 aaKnown RBP15.54■□□□□ 0.08
CCDC60-201ENST00000327554 ELL2O00472 640 aaPredicted RBP15.53■□□□□ 0.08
CCDC60-201ENST00000327554 ERC2O15083 957 aa15.53■□□□□ 0.08
CCDC60-201ENST00000327554 PHF14O94880 888 aa15.53■□□□□ 0.08
CCDC60-201ENST00000327554 PRKAR2BP31323 418 aa15.53■□□□□ 0.08
CCDC60-201ENST00000327554 API5Q9BZZ5 524 aaKnown RBP15.53■□□□□ 0.08
CCDC60-201ENST00000327554 NEK4P51957 841 aa15.53■□□□□ 0.08
CCDC60-201ENST00000327554 ANKRD44Q8N8A2 993 aa15.53■□□□□ 0.08
CCDC60-201ENST00000327554 KIF20BQ96Q89 1820 aa15.53■□□□□ 0.08
CCDC60-201ENST00000327554 DLG5Q8TDM6 1919 aa15.52■□□□□ 0.08
CCDC60-201ENST00000327554 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.08
CCDC60-201ENST00000327554 ADCY5O95622 1261 aa15.52■□□□□ 0.08
CCDC60-201ENST00000327554 ZNF853P0CG23 659 aa15.52■□□□□ 0.08
CCDC60-201ENST00000327554 MBIPQ9NS73 344 aa15.52■□□□□ 0.08
CCDC60-201ENST00000327554 ARHGEF40Q8TER5 1519 aa15.52■□□□□ 0.07
CCDC60-201ENST00000327554 SMARCA5O60264 1052 aaPredicted RBP15.52■□□□□ 0.07
CCDC60-201ENST00000327554 IFT57Q9NWB7 429 aa15.52■□□□□ 0.07
CCDC60-201ENST00000327554 CD163L1Q9NR16 1453 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 CHD1O14646 1710 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 GNAI1P63096 354 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 NFE2L2Q16236 605 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 TWISTNBQ3B726 338 aaPredicted RBP15.51■□□□□ 0.07
CCDC60-201ENST00000327554 PDCL2Q8N4E4 241 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 MCM2P49736 904 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 ANKRD7Q92527 254 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 PHACTR3Q96KR7 559 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 GDPD2Q9HCC8 539 aa15.51■□□□□ 0.07
CCDC60-201ENST00000327554 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
CCDC60-201ENST00000327554 USP48Q86UV5 1035 aa15.5■□□□□ 0.07
CCDC60-201ENST00000327554 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
CCDC60-201ENST00000327554 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
CCDC60-201ENST00000327554 ZFYVE9O95405 1425 aa15.5■□□□□ 0.07
CCDC60-201ENST00000327554 C8orf58Q8NAV2 365 aa15.5■□□□□ 0.07
CCDC60-201ENST00000327554 CEP85Q6P2H3 762 aa15.49■□□□□ 0.07
CCDC60-201ENST00000327554 RTL1A6NKG5 1358 aa15.48■□□□□ 0.07
CCDC60-201ENST00000327554 RPAP2Q8IXW5 612 aaPredicted RBP15.48■□□□□ 0.07
CCDC60-201ENST00000327554 KIAA1524Q8TCG1 905 aa15.48■□□□□ 0.07
CCDC60-201ENST00000327554 RGS12O14924 1447 aa15.48■□□□□ 0.07
CCDC60-201ENST00000327554 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
CCDC60-201ENST00000327554 RIOK3O14730 519 aaKnown RBP15.48■□□□□ 0.07
CCDC60-201ENST00000327554 CLTCQ00610 1675 aaKnown RBP15.47■□□□□ 0.07
CCDC60-201ENST00000327554 HCLS1P14317 486 aaPredicted RBP15.47■□□□□ 0.07
CCDC60-201ENST00000327554 U2AF2P26368 475 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC60-201ENST00000327554 FOXD4L6Q3SYB3 417 aaPredicted RBP15.47■□□□□ 0.07
CCDC60-201ENST00000327554 CCDC183Q5T5S1 534 aa15.47■□□□□ 0.07
CCDC60-201ENST00000327554 FOXD4L3Q6VB84 417 aaPredicted RBP15.47■□□□□ 0.07
CCDC60-201ENST00000327554 TMEM87AQ8NBN3 555 aa15.47■□□□□ 0.07
CCDC60-201ENST00000327554 UHRF1BP1LA0JNW5 1464 aa15.47■□□□□ 0.07
CCDC60-201ENST00000327554 APBB1O00213 710 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 CTIFO43310 598 aaKnown RBP15.46■□□□□ 0.07
CCDC60-201ENST00000327554 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCDC60-201ENST00000327554 KCNF1Q9H3M0 494 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 PALD1Q9ULE6 856 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 NPATQ14207 1427 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 ABCC3O15438 1527 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 MAP2P11137 1827 aaKnown RBP15.46■□□□□ 0.07
CCDC60-201ENST00000327554 KIDINS220Q9ULH0 1771 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 KDM4AO75164 1064 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 PYCARDQ9ULZ3 195 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 FRMPD1Q5SYB0 1578 aa15.46■□□□□ 0.07
CCDC60-201ENST00000327554 ASXL2Q76L83 1435 aa15.45■□□□□ 0.06
CCDC60-201ENST00000327554 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
CCDC60-201ENST00000327554 OSBPL3Q9H4L5 887 aa15.45■□□□□ 0.06
CCDC60-201ENST00000327554 DIAPH3Q9NSV4 1193 aa15.45■□□□□ 0.06
CCDC60-201ENST00000327554 RPAP1Q9BWH6 1393 aaPredicted RBP15.45■□□□□ 0.06
CCDC60-201ENST00000327554 TERF2IPQ9NYB0 399 aa15.45■□□□□ 0.06
CCDC60-201ENST00000327554 HMOX1P09601 288 aa15.44■□□□□ 0.06
CCDC60-201ENST00000327554 MX1P20591 662 aa15.44■□□□□ 0.06
CCDC60-201ENST00000327554 NOL8Q76FK4 1167 aaKnown RBP15.44■□□□□ 0.06
CCDC60-201ENST00000327554 WDR33Q9C0J8 1336 aaKnown RBP15.44■□□□□ 0.06
CCDC60-201ENST00000327554 NEXMIFQ5QGS0 1516 aa15.44■□□□□ 0.06
CCDC60-201ENST00000327554 PIK3C2BO00750 1634 aa15.44■□□□□ 0.06
CCDC60-201ENST00000327554 AP5Z1O43299 807 aa15.44■□□□□ 0.06
CCDC60-201ENST00000327554 MSH6P52701 1360 aa15.43■□□□□ 0.06
CCDC60-201ENST00000327554 PDE1AP54750 535 aa15.43■□□□□ 0.06
CCDC60-201ENST00000327554 ESYT1Q9BSJ8 1104 aa15.43■□□□□ 0.06
CCDC60-201ENST00000327554 FUCA2Q9BTY2 467 aa15.43■□□□□ 0.06
CCDC60-201ENST00000327554 GTF2E1P29083 439 aaPredicted RBP15.43■□□□□ 0.06
CCDC60-201ENST00000327554 ANAPC15P60006 121 aa15.43■□□□□ 0.06
CCDC60-201ENST00000327554 IL17RAQ96F46 866 aa15.43■□□□□ 0.06
CCDC60-201ENST00000327554 SRCIN1Q9C0H9 1055 aa15.43■□□□□ 0.06
CCDC60-201ENST00000327554 IGSF3O75054 1194 aa15.42■□□□□ 0.06
CCDC60-201ENST00000327554 KRT24Q2M2I5 525 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms