RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
RPAIN-201ENST00000327154 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.72
RPAIN-201ENST00000327154 FAM208AQ9UK61 1670 aaKnown RBP19.55■□□□□ 0.72
RPAIN-201ENST00000327154 FLT4P35916 1363 aa19.55■□□□□ 0.72
RPAIN-201ENST00000327154 CGNL1Q0VF96 1302 aa19.54■□□□□ 0.72
RPAIN-201ENST00000327154 HSPA5P11021 654 aaKnown RBP19.54■□□□□ 0.72
RPAIN-201ENST00000327154 TATP17735 454 aaPredicted RBP19.54■□□□□ 0.72
RPAIN-201ENST00000327154 PTGER2P43116 358 aa19.53■□□□□ 0.72
RPAIN-201ENST00000327154 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
RPAIN-201ENST00000327154 KCNQ4P56696 695 aa19.52■□□□□ 0.72
RPAIN-201ENST00000327154 ZNF827Q17R98 1081 aa19.52■□□□□ 0.72
RPAIN-201ENST00000327154 SLC27A3Q5K4L6 730 aa19.52■□□□□ 0.72
RPAIN-201ENST00000327154 MTFR1LQ9H019 292 aa19.51■□□□□ 0.71
RPAIN-201ENST00000327154 RGPD2P0DJD1 1756 aa19.51■□□□□ 0.71
RPAIN-201ENST00000327154 KAT6BQ8WYB5 2073 aa19.51■□□□□ 0.71
RPAIN-201ENST00000327154 CASZ1Q86V15 1759 aa19.5■□□□□ 0.71
RPAIN-201ENST00000327154 MYOM1P52179 1685 aa19.5■□□□□ 0.71
RPAIN-201ENST00000327154 BTAF1O14981 1849 aa19.5■□□□□ 0.71
RPAIN-201ENST00000327154 AKT1S1Q96B36 256 aa19.49■□□□□ 0.71
RPAIN-201ENST00000327154 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
RPAIN-201ENST00000327154 NSD2O96028 1365 aa19.48■□□□□ 0.71
RPAIN-201ENST00000327154 TNNT2P45379 298 aaPredicted RBP19.48■□□□□ 0.71
RPAIN-201ENST00000327154 PANK3Q9H999 370 aa19.48■□□□□ 0.71
RPAIN-201ENST00000327154 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
RPAIN-201ENST00000327154 WASHC2AQ641Q2 1341 aa19.48■□□□□ 0.71
RPAIN-201ENST00000327154 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
RPAIN-201ENST00000327154 PCDH11XQ9BZA7 1347 aa19.47■□□□□ 0.71
RPAIN-201ENST00000327154 PCDH11YQ9BZA8 1340 aa19.47■□□□□ 0.71
RPAIN-201ENST00000327154 SGIP1Q9BQI5 828 aa19.46■□□□□ 0.71
RPAIN-201ENST00000327154 CYP27B1O15528 508 aa19.45■□□□□ 0.7
RPAIN-201ENST00000327154 EYA1Q99502 592 aa19.45■□□□□ 0.7
RPAIN-201ENST00000327154 TFCP2L1Q9NZI6 479 aa19.45■□□□□ 0.7
RPAIN-201ENST00000327154 CCNL1Q9UK58 526 aaPredicted RBP19.45■□□□□ 0.7
RPAIN-201ENST00000327154 FHDC1Q9C0D6 1143 aaPredicted RBP19.44■□□□□ 0.7
RPAIN-201ENST00000327154 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
RPAIN-201ENST00000327154 MPRIPQ6WCQ1 1025 aa19.43■□□□□ 0.7
RPAIN-201ENST00000327154 SHANK3Q9BYB0 1731 aa19.42■□□□□ 0.7
RPAIN-201ENST00000327154 ARXQ96QS3 562 aa19.42■□□□□ 0.7
RPAIN-201ENST00000327154 SYT17Q9BSW7 474 aa19.42■□□□□ 0.7
RPAIN-201ENST00000327154 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
RPAIN-201ENST00000327154 PNPLA7Q6ZV29 1317 aa19.42■□□□□ 0.7
RPAIN-201ENST00000327154 SLC16A10Q8TF71 515 aa19.41■□□□□ 0.7
RPAIN-201ENST00000327154 DOT1LQ8TEK3 1739 aa19.41■□□□□ 0.7
RPAIN-201ENST00000327154 YY1P25490 414 aa19.4■□□□□ 0.7
RPAIN-201ENST00000327154 EIF4A2Q14240 407 aaKnown RBP19.4■□□□□ 0.7
RPAIN-201ENST00000327154 NCAPD2Q15021 1401 aa19.38■□□□□ 0.69
RPAIN-201ENST00000327154 NKX1-1Q15270 411 aaPredicted RBP19.38■□□□□ 0.69
RPAIN-201ENST00000327154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.38■□□□□ 0.692e-8■□□□□ 9.4
RPAIN-201ENST00000327154 MSH5O43196 834 aa19.37■□□□□ 0.69
RPAIN-201ENST00000327154 MORC1Q86VD1 984 aa19.37■□□□□ 0.69
RPAIN-201ENST00000327154 PIGBQ92521 554 aa19.37■□□□□ 0.69
RPAIN-201ENST00000327154 PALLDQ8WX93 1383 aa19.35■□□□□ 0.69
RPAIN-201ENST00000327154 MAP2P11137 1827 aaKnown RBP19.35■□□□□ 0.69
RPAIN-201ENST00000327154 POLD1P28340 1107 aa19.35■□□□□ 0.69
RPAIN-201ENST00000327154 COL23A1Q86Y22 540 aaPredicted RBP19.35■□□□□ 0.69
RPAIN-201ENST00000327154 SMARCC1Q92922 1105 aaPredicted RBP19.35■□□□□ 0.69
RPAIN-201ENST00000327154 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
RPAIN-201ENST00000327154 PHKG2P15735 406 aa19.34■□□□□ 0.69
RPAIN-201ENST00000327154 IFNL2Q8IZJ0 200 aa19.34■□□□□ 0.69
RPAIN-201ENST00000327154 LY75O60449 1722 aa19.34■□□□□ 0.69
RPAIN-201ENST00000327154 KLHL34Q8N239 644 aa19.33■□□□□ 0.68
RPAIN-201ENST00000327154 ANKRD26Q9UPS8 1709 aa19.33■□□□□ 0.68
RPAIN-201ENST00000327154 HMGB2P26583 209 aaKnown RBP19.32■□□□□ 0.68
RPAIN-201ENST00000327154 TMOD3Q9NYL9 352 aa19.32■□□□□ 0.68
RPAIN-201ENST00000327154 IGSF1Q8N6C5 1336 aa19.31■□□□□ 0.68
RPAIN-201ENST00000327154 ASAP1Q9ULH1 1129 aa19.3■□□□□ 0.68
RPAIN-201ENST00000327154 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
RPAIN-201ENST00000327154 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
RPAIN-201ENST00000327154 PKD1L3Q7Z443 1732 aa19.29■□□□□ 0.68
RPAIN-201ENST00000327154 MSL1Q68DK7 614 aa19.29■□□□□ 0.68
RPAIN-201ENST00000327154 LOC102724428A0A0B4J2F2 783 aa19.28■□□□□ 0.68
RPAIN-201ENST00000327154 SIK1P57059 783 aa19.28■□□□□ 0.68
RPAIN-201ENST00000327154 PLEKHO1Q53GL0 409 aaPredicted RBP19.28■□□□□ 0.68
RPAIN-201ENST00000327154 FLAD1Q8NFF5 587 aa19.28■□□□□ 0.68
RPAIN-201ENST00000327154 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
RPAIN-201ENST00000327154 AK7Q96M32 723 aa19.27■□□□□ 0.68
RPAIN-201ENST00000327154 QSER1Q2KHR3 1735 aa19.26■□□□□ 0.67
RPAIN-201ENST00000327154 TOGARAM1Q9Y4F4 1720 aa19.26■□□□□ 0.67
RPAIN-201ENST00000327154 GPR162Q16538 588 aa19.26■□□□□ 0.67
RPAIN-201ENST00000327154 SMIM5Q71RC9 77 aa19.26■□□□□ 0.67
RPAIN-201ENST00000327154 AMIGO3Q86WK7 504 aa19.26■□□□□ 0.67
RPAIN-201ENST00000327154 AEBP1Q8IUX7 1158 aa19.26■□□□□ 0.67
RPAIN-201ENST00000327154 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
RPAIN-201ENST00000327154 AMOTQ4VCS5 1084 aa19.25■□□□□ 0.67
RPAIN-201ENST00000327154 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
RPAIN-201ENST00000327154 TUBGCP6Q96RT7 1819 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 ERVV-2B6SEH9 535 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 PHF14O94880 888 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 HSP90AB1P08238 724 aaKnown RBP19.24■□□□□ 0.67
RPAIN-201ENST00000327154 IL13P35225 146 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 ATP6V1AP38606 617 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 SULT6B1Q6IMI4 303 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 LINC00116Q8NCU8 138 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 NLGN2Q8NFZ4 835 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 DCAF5Q96JK2 942 aa19.24■□□□□ 0.67
RPAIN-201ENST00000327154 ITGB4P16144 1822 aa19.23■□□□□ 0.67
RPAIN-201ENST00000327154 PLEKHG2Q9H7P9 1386 aa19.23■□□□□ 0.67
RPAIN-201ENST00000327154 PER1O15534 1290 aaPredicted RBP19.23■□□□□ 0.67
RPAIN-201ENST00000327154 ITPK1Q13572 414 aa19.23■□□□□ 0.67
RPAIN-201ENST00000327154 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms