RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
SSBP3-201ENST00000326956 RBSNQ9H1K0 784 aa17.88■□□□□ 0.45
SSBP3-201ENST00000326956 ATP7BP35670 1465 aa17.88■□□□□ 0.45
SSBP3-201ENST00000326956 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
SSBP3-201ENST00000326956 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
SSBP3-201ENST00000326956 FOXD4L5Q5VV16 416 aaPredicted RBP17.88■□□□□ 0.45
SSBP3-201ENST00000326956 FOXD4L4Q8WXT5 416 aaPredicted RBP17.88■□□□□ 0.45
SSBP3-201ENST00000326956 FBXO31Q5XUX0 539 aaPredicted RBP17.87■□□□□ 0.45
SSBP3-201ENST00000326956 RBM27Q9P2N5 1060 aaKnown RBP17.87■□□□□ 0.45
SSBP3-201ENST00000326956 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
SSBP3-201ENST00000326956 PDCL3Q9H2J4 239 aa17.86■□□□□ 0.45
SSBP3-201ENST00000326956 R3HCC1Q9Y3T6 440 aaKnown RBP17.86■□□□□ 0.45
SSBP3-201ENST00000326956 EDC4Q6P2E9 1401 aaKnown RBP17.85■□□□□ 0.45
SSBP3-201ENST00000326956 MYO5BQ9ULV0 1848 aa17.85■□□□□ 0.45
SSBP3-201ENST00000326956 NEK4P51957 841 aa17.85■□□□□ 0.45
SSBP3-201ENST00000326956 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
SSBP3-201ENST00000326956 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
SSBP3-201ENST00000326956 MEIS3Q99687 375 aa17.85■□□□□ 0.45
SSBP3-201ENST00000326956 MCCP23508 829 aa17.85■□□□□ 0.45
SSBP3-201ENST00000326956 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
SSBP3-201ENST00000326956 NOL7Q9UMY1 257 aaKnown RBP17.85■□□□□ 0.45
SSBP3-201ENST00000326956 MBD3O95983 291 aa17.84■□□□□ 0.45
SSBP3-201ENST00000326956 SLC4A10Q6U841 1118 aa17.84■□□□□ 0.45
SSBP3-201ENST00000326956 PTPRCP08575 1304 aa17.84■□□□□ 0.45
SSBP3-201ENST00000326956 MSH6P52701 1360 aa17.84■□□□□ 0.45
SSBP3-201ENST00000326956 SYCE3A1L190 88 aa17.84■□□□□ 0.45
SSBP3-201ENST00000326956 GPT2Q8TD30 523 aa17.84■□□□□ 0.45
SSBP3-201ENST00000326956 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.45
SSBP3-201ENST00000326956 LRSAM1Q6UWE0 723 aa17.83■□□□□ 0.45
SSBP3-201ENST00000326956 PKNOX2Q96KN3 472 aa17.83■□□□□ 0.45
SSBP3-201ENST00000326956 ZMYND15Q9H091 742 aa17.83■□□□□ 0.45
SSBP3-201ENST00000326956 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.44
SSBP3-201ENST00000326956 RTL1A6NKG5 1358 aa17.83■□□□□ 0.44
SSBP3-201ENST00000326956 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.44
SSBP3-201ENST00000326956 WASLO00401 505 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-201ENST00000326956 ATP10DQ9P241 1426 aa17.82■□□□□ 0.44
SSBP3-201ENST00000326956 DIP2CQ9Y2E4 1556 aa17.82■□□□□ 0.44
SSBP3-201ENST00000326956 NEO1Q92859 1461 aa17.82■□□□□ 0.44
SSBP3-201ENST00000326956 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
SSBP3-201ENST00000326956 MCM2P49736 904 aa17.82■□□□□ 0.44
SSBP3-201ENST00000326956 TERF1P54274 439 aa17.82■□□□□ 0.44
SSBP3-201ENST00000326956 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
SSBP3-201ENST00000326956 PTMAP06454 111 aaKnown RBP17.82■□□□□ 0.44
SSBP3-201ENST00000326956 MCM10Q7L590 875 aa17.82■□□□□ 0.44
SSBP3-201ENST00000326956 CSPP1Q1MSJ5 1256 aa17.81■□□□□ 0.44
SSBP3-201ENST00000326956 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
SSBP3-201ENST00000326956 PDLIM2Q96JY6 352 aa17.81■□□□□ 0.44
SSBP3-201ENST00000326956 CCDC39Q9UFE4 941 aa17.81■□□□□ 0.44
SSBP3-201ENST00000326956 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
SSBP3-201ENST00000326956 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-201ENST00000326956 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
SSBP3-201ENST00000326956 TMX3Q96JJ7 454 aa17.81■□□□□ 0.44
SSBP3-201ENST00000326956 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
SSBP3-201ENST00000326956 PDE1AP54750 535 aa17.8■□□□□ 0.44
SSBP3-201ENST00000326956 SYAP1Q96A49 352 aaPredicted RBP17.8■□□□□ 0.44
SSBP3-201ENST00000326956 KNDC1Q76NI1 1749 aa17.8■□□□□ 0.44
SSBP3-201ENST00000326956 YEATS2Q9ULM3 1422 aa17.8■□□□□ 0.44
SSBP3-201ENST00000326956 CHL1O00533 1208 aa17.8■□□□□ 0.44
SSBP3-201ENST00000326956 ZNF500O60304 480 aaPredicted RBP17.8■□□□□ 0.44
SSBP3-201ENST00000326956 RBM10P98175 930 aaKnown RBP17.8■□□□□ 0.44
SSBP3-201ENST00000326956 NOL8Q76FK4 1167 aaKnown RBP17.8■□□□□ 0.44
SSBP3-201ENST00000326956 AEBP1Q8IUX7 1158 aa17.8■□□□□ 0.44
SSBP3-201ENST00000326956 RNF214Q8ND24 703 aa17.8■□□□□ 0.44
SSBP3-201ENST00000326956 ZKSCAN5Q9Y2L8 839 aa17.8■□□□□ 0.44
SSBP3-201ENST00000326956 FAM13BQ9NYF5 915 aa17.79■□□□□ 0.44
SSBP3-201ENST00000326956 CCDC61Q9Y6R9 512 aa17.79■□□□□ 0.44
SSBP3-201ENST00000326956 PREX1Q8TCU6 1659 aa17.79■□□□□ 0.44
SSBP3-201ENST00000326956 MCM5P33992 734 aa17.78■□□□□ 0.44
SSBP3-201ENST00000326956 CHAMP1Q96JM3 812 aa17.78■□□□□ 0.44
SSBP3-201ENST00000326956 DLG5Q8TDM6 1919 aa17.78■□□□□ 0.44
SSBP3-201ENST00000326956 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
SSBP3-201ENST00000326956 ANO2Q9NQ90 1003 aa17.78■□□□□ 0.44
SSBP3-201ENST00000326956 KIAA0232Q92628 1395 aa17.77■□□□□ 0.44
SSBP3-201ENST00000326956 CCT4P50991 539 aaKnown RBP17.77■□□□□ 0.44
SSBP3-201ENST00000326956 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
SSBP3-201ENST00000326956 TXNDC2Q86VQ3 553 aa17.77■□□□□ 0.43
SSBP3-201ENST00000326956 EIF4A2Q14240 407 aaKnown RBP17.76■□□□□ 0.43
SSBP3-201ENST00000326956 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
SSBP3-201ENST00000326956 TSPY26PQ9H489 355 aa17.76■□□□□ 0.43
SSBP3-201ENST00000326956 OSBPL3Q9H4L5 887 aa17.76■□□□□ 0.43
SSBP3-201ENST00000326956 EXOC6BQ9Y2D4 811 aa17.76■□□□□ 0.43
SSBP3-201ENST00000326956 GNAI2P04899 355 aa17.76■□□□□ 0.43
SSBP3-201ENST00000326956 MAP7D2Q96T17 732 aa17.76■□□□□ 0.43
SSBP3-201ENST00000326956 NCKAP5LQ9HCH0 1330 aa17.76■□□□□ 0.43
SSBP3-201ENST00000326956 UQCRHLA0A096LP55 91 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 F6X3S4 739 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 UQCRHP07919 91 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
SSBP3-201ENST00000326956 PHF14O94880 888 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 ESYT1Q9BSJ8 1104 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 RGS12O14924 1447 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 TSHZ3Q63HK5 1081 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 STK31Q9BXU1 1019 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 LRRCC1Q9C099 1032 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 TSPYL4Q9UJ04 414 aa17.75■□□□□ 0.43
SSBP3-201ENST00000326956 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
SSBP3-201ENST00000326956 BRD1O95696 1058 aa17.74■□□□□ 0.43
SSBP3-201ENST00000326956 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-201ENST00000326956 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-201ENST00000326956 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms