RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 PRIM1P49642 420 aaKnown RBP11.33□□□□□ -0.59
CCNC-201ENST00000326298 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.59
CCNC-201ENST00000326298 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
CCNC-201ENST00000326298 SYTL4Q96C24 671 aaPredicted RBP11.33□□□□□ -0.6
CCNC-201ENST00000326298 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
CCNC-201ENST00000326298 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
CCNC-201ENST00000326298 ZCRB1Q8TBF4 217 aaKnown RBP11.32□□□□□ -0.6
CCNC-201ENST00000326298 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
CCNC-201ENST00000326298 RTL1A6NKG5 1358 aa11.32□□□□□ -0.6
CCNC-201ENST00000326298 DOT1LQ8TEK3 1739 aa11.32□□□□□ -0.6
CCNC-201ENST00000326298 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
CCNC-201ENST00000326298 CLSPNQ9HAW4 1339 aa11.31□□□□□ -0.6
CCNC-201ENST00000326298 INSRP06213 1382 aa11.31□□□□□ -0.6
CCNC-201ENST00000326298 PPM1GO15355 546 aaPredicted RBP11.31□□□□□ -0.6
CCNC-201ENST00000326298 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
CCNC-201ENST00000326298 TNNT2P45379 298 aaPredicted RBP11.3□□□□□ -0.6
CCNC-201ENST00000326298 CDCA8Q53HL2 280 aa11.3□□□□□ -0.6
CCNC-201ENST00000326298 CCER1Q8TC90 406 aaPredicted RBP11.3□□□□□ -0.6
CCNC-201ENST00000326298 FLT4P35916 1363 aa11.3□□□□□ -0.6
CCNC-201ENST00000326298 CYP27B1O15528 508 aa11.29□□□□□ -0.6
CCNC-201ENST00000326298 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
CCNC-201ENST00000326298 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
CCNC-201ENST00000326298 POLKQ9UBT6 870 aa11.29□□□□□ -0.6
CCNC-201ENST00000326298 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
CCNC-201ENST00000326298 PNPLA7Q6ZV29 1317 aa11.27□□□□□ -0.61
CCNC-201ENST00000326298 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
CCNC-201ENST00000326298 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.61
CCNC-201ENST00000326298 TOGARAM1Q9Y4F4 1720 aa11.27□□□□□ -0.61
CCNC-201ENST00000326298 SMIM5Q71RC9 77 aa11.27□□□□□ -0.61
CCNC-201ENST00000326298 EYA1Q99502 592 aa11.27□□□□□ -0.61
CCNC-201ENST00000326298 FHDC1Q9C0D6 1143 aaPredicted RBP11.27□□□□□ -0.61
CCNC-201ENST00000326298 PANK3Q9H999 370 aa11.27□□□□□ -0.61
CCNC-201ENST00000326298 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
CCNC-201ENST00000326298 TATP17735 454 aaPredicted RBP11.26□□□□□ -0.61
CCNC-201ENST00000326298 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCNC-201ENST00000326298 AMIGO3Q86WK7 504 aa11.26□□□□□ -0.61
CCNC-201ENST00000326298 MTFR1LQ9H019 292 aa11.25□□□□□ -0.61
CCNC-201ENST00000326298 WASHC2AQ641Q2 1341 aa11.25□□□□□ -0.61
CCNC-201ENST00000326298 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
CCNC-201ENST00000326298 SMG6Q86US8 1419 aaKnown RBP11.25□□□□□ -0.61
CCNC-201ENST00000326298 LY75O60449 1722 aa11.25□□□□□ -0.61
CCNC-201ENST00000326298 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
CCNC-201ENST00000326298 SYT17Q9BSW7 474 aa11.25□□□□□ -0.61
CCNC-201ENST00000326298 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
CCNC-201ENST00000326298 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
CCNC-201ENST00000326298 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
CCNC-201ENST00000326298 CCNL1Q9UK58 526 aaPredicted RBP11.24□□□□□ -0.61
CCNC-201ENST00000326298 SLC27A3Q5K4L6 730 aa11.23□□□□□ -0.61
CCNC-201ENST00000326298 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
CCNC-201ENST00000326298 PCDH11XQ9BZA7 1347 aa11.23□□□□□ -0.61
CCNC-201ENST00000326298 PCDH11YQ9BZA8 1340 aa11.23□□□□□ -0.61
CCNC-201ENST00000326298 TFCP2L1Q9NZI6 479 aa11.23□□□□□ -0.61
CCNC-201ENST00000326298 COL23A1Q86Y22 540 aaPredicted RBP11.22□□□□□ -0.61
CCNC-201ENST00000326298 PIGBQ92521 554 aa11.22□□□□□ -0.61
CCNC-201ENST00000326298 ITGB4P16144 1822 aa11.22□□□□□ -0.61
CCNC-201ENST00000326298 ARXQ96QS3 562 aa11.21□□□□□ -0.61
CCNC-201ENST00000326298 PALLDQ8WX93 1383 aa11.21□□□□□ -0.62
CCNC-201ENST00000326298 YY1P25490 414 aa11.2□□□□□ -0.62
CCNC-201ENST00000326298 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
CCNC-201ENST00000326298 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
CCNC-201ENST00000326298 KIF7Q2M1P5 1343 aa11.2□□□□□ -0.62
CCNC-201ENST00000326298 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
CCNC-201ENST00000326298 NLGN2Q8NFZ4 835 aa11.19□□□□□ -0.62
CCNC-201ENST00000326298 ASAP1Q9ULH1 1129 aa11.19□□□□□ -0.62
CCNC-201ENST00000326298 QSER1Q2KHR3 1735 aa11.19□□□□□ -0.62
CCNC-201ENST00000326298 PHKG2P15735 406 aa11.19□□□□□ -0.62
CCNC-201ENST00000326298 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
CCNC-201ENST00000326298 C5P01031 1676 aa11.18□□□□□ -0.62
CCNC-201ENST00000326298 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
CCNC-201ENST00000326298 COL24A1Q17RW2 1714 aa11.18□□□□□ -0.62
CCNC-201ENST00000326298 TAF1LQ8IZX4 1826 aa11.18□□□□□ -0.62
CCNC-201ENST00000326298 ITPK1Q13572 414 aa11.17□□□□□ -0.62
CCNC-201ENST00000326298 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
CCNC-201ENST00000326298 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
CCNC-201ENST00000326298 MSH5O43196 834 aa11.17□□□□□ -0.62
CCNC-201ENST00000326298 LINC00116Q8NCU8 138 aa11.17□□□□□ -0.62
CCNC-201ENST00000326298 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
CCNC-201ENST00000326298 MORC1Q86VD1 984 aa11.16□□□□□ -0.62
CCNC-201ENST00000326298 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
CCNC-201ENST00000326298 SLC16A10Q8TF71 515 aa11.16□□□□□ -0.62
CCNC-201ENST00000326298 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
CCNC-201ENST00000326298 C4BP0C0L5 1744 aa11.15□□□□□ -0.62
CCNC-201ENST00000326298 KDM6AO15550 1401 aaPredicted RBP11.15□□□□□ -0.62
CCNC-201ENST00000326298 PHF14O94880 888 aa11.15□□□□□ -0.62
CCNC-201ENST00000326298 CNGB1Q14028 1251 aaPredicted RBP11.15□□□□□ -0.62
CCNC-201ENST00000326298 IFNL2Q8IZJ0 200 aa11.15□□□□□ -0.62
CCNC-201ENST00000326298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.622e-6■□□□□ 10.7
CCNC-201ENST00000326298 CEP350Q5VT06 3117 aa11.15□□□□□ -0.62
CCNC-201ENST00000326298 LOC102724428A0A0B4J2F2 783 aa11.15□□□□□ -0.63
CCNC-201ENST00000326298 SIK1P57059 783 aa11.15□□□□□ -0.63
CCNC-201ENST00000326298 MAP3K5Q99683 1374 aa11.14□□□□□ -0.63
CCNC-201ENST00000326298 IL13P35225 146 aa11.14□□□□□ -0.63
CCNC-201ENST00000326298 TMOD3Q9NYL9 352 aa11.14□□□□□ -0.63
CCNC-201ENST00000326298 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
CCNC-201ENST00000326298 UBR3Q6ZT12 1888 aa11.13□□□□□ -0.63
CCNC-201ENST00000326298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
CCNC-201ENST00000326298 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.632e-7■□□□□ 9
CCNC-201ENST00000326298 SULT6B1Q6IMI4 303 aa11.13□□□□□ -0.63
CCNC-201ENST00000326298 POLD1P28340 1107 aa11.12□□□□□ -0.63
CCNC-201ENST00000326298 CC2D1BQ5T0F9 858 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms