RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
PRPF3-201ENST00000324862 ZNF530Q6P9A1 599 aaPredicted RBP20.03■□□□□ 0.8
PRPF3-201ENST00000324862 FNBP4Q8N3X1 1017 aaPredicted RBP20.03■□□□□ 0.8
PRPF3-201ENST00000324862 GAS2L2Q8NHY3 880 aa20.03■□□□□ 0.8
PRPF3-201ENST00000324862 USP21Q9UK80 565 aa20.03■□□□□ 0.8
PRPF3-201ENST00000324862 NRAPQ86VF7 1730 aa20.03■□□□□ 0.8
PRPF3-201ENST00000324862 PLEKHO1Q53GL0 409 aaPredicted RBP20.02■□□□□ 0.8
PRPF3-201ENST00000324862 IL2RBP14784 551 aa20.02■□□□□ 0.79
PRPF3-201ENST00000324862 DLG5Q8TDM6 1919 aa20.01■□□□□ 0.79
PRPF3-201ENST00000324862 AFF2P51816 1311 aa20.01■□□□□ 0.79
PRPF3-201ENST00000324862 SPATA31A1Q5TZJ5 1347 aa20.01■□□□□ 0.79
PRPF3-201ENST00000324862 SLFN5Q08AF3 891 aa20■□□□□ 0.79
PRPF3-201ENST00000324862 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
PRPF3-201ENST00000324862 LGR6Q9HBX8 967 aa20■□□□□ 0.79
PRPF3-201ENST00000324862 LAS1LQ9Y4W2 734 aaKnown RBP20■□□□□ 0.79
PRPF3-201ENST00000324862 GNAT3A8MTJ3 354 aa20■□□□□ 0.79
PRPF3-201ENST00000324862 IL17REQ8NFR9 667 aa20■□□□□ 0.79
PRPF3-201ENST00000324862 TSR2Q969E8 191 aaKnown RBP20■□□□□ 0.79
PRPF3-201ENST00000324862 CYP27B1O15528 508 aa19.99■□□□□ 0.79
PRPF3-201ENST00000324862 AMOTQ4VCS5 1084 aa19.99■□□□□ 0.79
PRPF3-201ENST00000324862 DUSP27Q5VZP5 1158 aa19.99■□□□□ 0.79
PRPF3-201ENST00000324862 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
PRPF3-201ENST00000324862 SPATA31A5Q5VU36 1347 aa19.99■□□□□ 0.79
PRPF3-201ENST00000324862 SPATA31A7Q8IWB4 1347 aa19.99■□□□□ 0.79
PRPF3-201ENST00000324862 OVOS2A0A0G2JMS6 1433 aa19.98■□□□□ 0.79
PRPF3-201ENST00000324862 WDR63Q8IWG1 891 aa19.98■□□□□ 0.79
PRPF3-201ENST00000324862 MAP3K5Q99683 1374 aa19.98■□□□□ 0.79
PRPF3-201ENST00000324862 PDE3BQ13370 1112 aa19.97■□□□□ 0.79
PRPF3-201ENST00000324862 RTF1Q92541 710 aaKnown RBP19.97■□□□□ 0.79
PRPF3-201ENST00000324862 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
PRPF3-201ENST00000324862 DDX54Q8TDD1 881 aaKnown RBP19.97■□□□□ 0.79
PRPF3-201ENST00000324862 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
PRPF3-201ENST00000324862 ZCRB1Q8TBF4 217 aaKnown RBP19.96■□□□□ 0.79
PRPF3-201ENST00000324862 NWD2Q9ULI1 1742 aa19.96■□□□□ 0.79
PRPF3-201ENST00000324862 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
PRPF3-201ENST00000324862 AKAP4Q5JQC9 854 aa19.96■□□□□ 0.79
PRPF3-201ENST00000324862 C1orf141Q5JVX7 400 aa19.96■□□□□ 0.79
PRPF3-201ENST00000324862 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
PRPF3-201ENST00000324862 PHKG2P15735 406 aa19.95■□□□□ 0.78
PRPF3-201ENST00000324862 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
PRPF3-201ENST00000324862 VPS72Q15906 364 aa19.95■□□□□ 0.78
PRPF3-201ENST00000324862 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
PRPF3-201ENST00000324862 E9PSI1 815 aa19.95■□□□□ 0.78
PRPF3-201ENST00000324862 TRMT2AQ8IZ69 625 aaKnown RBP19.95■□□□□ 0.78
PRPF3-201ENST00000324862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.93■□□□□ 0.781e-6■■□□□ 12
PRPF3-201ENST00000324862 FANCIQ9NVI1 1328 aa19.93■□□□□ 0.78
PRPF3-201ENST00000324862 IFNL2Q8IZJ0 200 aa19.92■□□□□ 0.78
PRPF3-201ENST00000324862 RNMTO43148 476 aaKnown RBP19.91■□□□□ 0.78
PRPF3-201ENST00000324862 MBIPQ9NS73 344 aa19.91■□□□□ 0.78
PRPF3-201ENST00000324862 KDM6AO15550 1401 aaPredicted RBP19.91■□□□□ 0.78
PRPF3-201ENST00000324862 PKD1L3Q7Z443 1732 aa19.9■□□□□ 0.78
PRPF3-201ENST00000324862 PARP4Q9UKK3 1724 aaKnown RBP19.9■□□□□ 0.78
PRPF3-201ENST00000324862 ZNF853P0CG23 659 aa19.9■□□□□ 0.78
PRPF3-201ENST00000324862 PCDH11XQ9BZA7 1347 aa19.9■□□□□ 0.78
PRPF3-201ENST00000324862 PCDH11YQ9BZA8 1340 aa19.9■□□□□ 0.78
PRPF3-201ENST00000324862 CEMIPQ8WUJ3 1361 aa19.9■□□□□ 0.78
PRPF3-201ENST00000324862 HTATSF1O43719 755 aaKnown RBP19.9■□□□□ 0.78
PRPF3-201ENST00000324862 CFAP44Q96MT7 982 aa19.9■□□□□ 0.78
PRPF3-201ENST00000324862 THRAP3Q9Y2W1 955 aaKnown RBP19.9■□□□□ 0.78
PRPF3-201ENST00000324862 A0A0G2JS52 829 aa19.89■□□□□ 0.77
PRPF3-201ENST00000324862 MYT1Q01538 1121 aa19.89■□□□□ 0.77
PRPF3-201ENST00000324862 KRT24Q2M2I5 525 aa19.89■□□□□ 0.77
PRPF3-201ENST00000324862 GJD4Q96KN9 370 aaPredicted RBP19.89■□□□□ 0.77
PRPF3-201ENST00000324862 QTRT2Q9H974 415 aaKnown RBP19.88■□□□□ 0.77
PRPF3-201ENST00000324862 IFT57Q9NWB7 429 aa19.88■□□□□ 0.77
PRPF3-201ENST00000324862 IL16Q14005 1332 aa19.88■□□□□ 0.77
PRPF3-201ENST00000324862 EXOC5O00471 708 aa19.88■□□□□ 0.77
PRPF3-201ENST00000324862 EXOSC9Q06265 439 aaKnown RBP19.88■□□□□ 0.77
PRPF3-201ENST00000324862 BARGINQ6ZT62 677 aa19.88■□□□□ 0.77
PRPF3-201ENST00000324862 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
PRPF3-201ENST00000324862 DDB1Q16531 1140 aa19.87■□□□□ 0.77
PRPF3-201ENST00000324862 SHANK3Q9BYB0 1731 aa19.87■□□□□ 0.77
PRPF3-201ENST00000324862 EP400Q96L91 3159 aa19.87■□□□□ 0.77
PRPF3-201ENST00000324862 ELL2O00472 640 aaPredicted RBP19.87■□□□□ 0.77
PRPF3-201ENST00000324862 CHL1O00533 1208 aa19.86■□□□□ 0.77
PRPF3-201ENST00000324862 GNAI1P63096 354 aa19.86■□□□□ 0.77
PRPF3-201ENST00000324862 TRPC5Q9UL62 973 aaPredicted RBP19.86■□□□□ 0.77
PRPF3-201ENST00000324862 GLI3P10071 1580 aa19.86■□□□□ 0.77
PRPF3-201ENST00000324862 KCNQ3O43525 872 aa19.86■□□□□ 0.77
PRPF3-201ENST00000324862 CALD1Q05682 793 aaKnown RBP19.86■□□□□ 0.77
PRPF3-201ENST00000324862 SUPT16HQ9Y5B9 1047 aaKnown RBP19.86■□□□□ 0.77
PRPF3-201ENST00000324862 ATRNO75882 1429 aa19.86■□□□□ 0.77
PRPF3-201ENST00000324862 TEFQ10587 303 aa19.85■□□□□ 0.77
PRPF3-201ENST00000324862 TSPYL6Q8N831 410 aa19.85■□□□□ 0.77
PRPF3-201ENST00000324862 NFATC2IPQ8NCF5 419 aa19.85■□□□□ 0.77
PRPF3-201ENST00000324862 TSPYL4Q9UJ04 414 aa19.85■□□□□ 0.77
PRPF3-201ENST00000324862 DCAF5Q96JK2 942 aa19.85■□□□□ 0.77
PRPF3-201ENST00000324862 FAM182BQ5T319 152 aa19.84■□□□□ 0.77
PRPF3-201ENST00000324862 MARCH10Q8NA82 808 aaPredicted RBP19.84■□□□□ 0.77
PRPF3-201ENST00000324862 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.84■□□□□ 0.77
PRPF3-201ENST00000324862 LRRC37A3O60309 1634 aa19.84■□□□□ 0.77
PRPF3-201ENST00000324862 TAF7Q15545 349 aaPredicted RBP19.84■□□□□ 0.77
PRPF3-201ENST00000324862 TNS2Q63HR2 1409 aa19.83■□□□□ 0.77
PRPF3-201ENST00000324862 C8orf58Q8NAV2 365 aa19.83■□□□□ 0.77
PRPF3-201ENST00000324862 WNK3Q9BYP7 1800 aa19.83■□□□□ 0.77
PRPF3-201ENST00000324862 PLEKHG2Q9H7P9 1386 aa19.83■□□□□ 0.76
PRPF3-201ENST00000324862 SLC39A6Q13433 755 aa19.82■□□□□ 0.76
PRPF3-201ENST00000324862 CDCA7Q9BWT1 371 aaPredicted RBP19.82■□□□□ 0.76
PRPF3-201ENST00000324862 RGS17Q9UGC6 210 aaPredicted RBP19.82■□□□□ 0.76
PRPF3-201ENST00000324862 RCAN3Q9UKA8 241 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms