RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TAF4BQ92750 862 aa24.7■■□□□ 1.54
RNF40-201ENST00000324685 SLC12A5Q9H2X9 1139 aa24.7■■□□□ 1.54
RNF40-201ENST00000324685 TDO2P48775 406 aa24.69■■□□□ 1.54
RNF40-201ENST00000324685 JAKMIP3Q5VZ66 844 aa24.69■■□□□ 1.54
RNF40-201ENST00000324685 STK11IPQ8N1F8 1099 aa24.69■■□□□ 1.54
RNF40-201ENST00000324685 ANKRD30BQ9BXX2 1392 aa24.69■■□□□ 1.54
RNF40-201ENST00000324685 PDCL2Q8N4E4 241 aa24.69■■□□□ 1.54
RNF40-201ENST00000324685 CCDC148Q8NFR7 591 aa24.69■■□□□ 1.54
RNF40-201ENST00000324685 CENPHQ9H3R5 247 aa24.69■■□□□ 1.54
RNF40-201ENST00000324685 CABP1Q9NZU7 370 aa24.68■■□□□ 1.54
RNF40-201ENST00000324685 ESPNB1AK53 854 aa24.68■■□□□ 1.54
RNF40-201ENST00000324685 TAX1BP1Q86VP1 789 aa24.68■■□□□ 1.54
RNF40-201ENST00000324685 DESP17661 470 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 GBP2P32456 591 aaPredicted RBP24.67■■□□□ 1.54
RNF40-201ENST00000324685 KIAA1328Q86T90 577 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 IL27Q8NEV9 243 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 GBP3Q9H0R5 595 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 EHBP1L1Q8N3D4 1523 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 SEPT11Q9NVA2 429 aaKnown RBP24.67■■□□□ 1.54
RNF40-201ENST00000324685 CEP126Q9P2H0 1117 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 FAM193AP78312 1265 aa24.67■■□□□ 1.54
RNF40-201ENST00000324685 PROSER2Q86WR7 435 aaPredicted RBP24.67■■□□□ 1.54
RNF40-201ENST00000324685 MYL6BP14649 208 aa24.66■■□□□ 1.54
RNF40-201ENST00000324685 RTEL1-TNFRSF6BF6WH68 1400 aa24.66■■□□□ 1.54
RNF40-201ENST00000324685 EIF5P55010 431 aaKnown RBP24.66■■□□□ 1.54
RNF40-201ENST00000324685 ZNF397Q8NF99 534 aaPredicted RBP24.66■■□□□ 1.54
RNF40-201ENST00000324685 IMMTQ16891 758 aaKnown RBP24.66■■□□□ 1.54
RNF40-201ENST00000324685 FCHSD2O94868 740 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 ARHGAP29Q52LW3 1261 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 MPNDQ8N594 471 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 CCDC102AQ96A19 550 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 C9orf84Q5VXU9 1444 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 FILIP1Q7Z7B0 1213 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 LRRFIP2Q9Y608 721 aaKnown RBP24.65■■□□□ 1.54
RNF40-201ENST00000324685 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 ATAD2Q6PL18 1390 aa24.65■■□□□ 1.54
RNF40-201ENST00000324685 SSBP05455 408 aaKnown RBP eCLIP24.64■■□□□ 1.53
RNF40-201ENST00000324685 UBXN4Q92575 508 aa24.64■■□□□ 1.53
RNF40-201ENST00000324685 BTBD11A6QL63 1104 aa24.63■■□□□ 1.53
RNF40-201ENST00000324685 CASTP20810 708 aaKnown RBP24.63■■□□□ 1.53
RNF40-201ENST00000324685 AFAP1Q8N556 730 aa24.63■■□□□ 1.53
RNF40-201ENST00000324685 INCENPQ9NQS7 918 aa24.63■■□□□ 1.53
RNF40-201ENST00000324685 RRP9O43818 475 aaKnown RBP24.63■■□□□ 1.53
RNF40-201ENST00000324685 ZSCAN30Q86W11 494 aa24.63■■□□□ 1.53
RNF40-201ENST00000324685 CFTRP13569 1480 aa24.62■■□□□ 1.53
RNF40-201ENST00000324685 TOM1L2Q6ZVM7 507 aa24.62■■□□□ 1.53
RNF40-201ENST00000324685 ZSCAN12O43309 604 aa24.62■■□□□ 1.53
RNF40-201ENST00000324685 RAB11FIP3O75154 756 aa24.62■■□□□ 1.53
RNF40-201ENST00000324685 CFAP100Q494V2 611 aa24.62■■□□□ 1.53
RNF40-201ENST00000324685 RAI14Q9P0K7 980 aa24.61■■□□□ 1.53
RNF40-201ENST00000324685 RPGRIP1LQ68CZ1 1315 aa24.61■■□□□ 1.53
RNF40-201ENST00000324685 PLEKHH1Q9ULM0 1364 aa24.61■■□□□ 1.53
RNF40-201ENST00000324685 NFE2L2Q16236 605 aa24.6■■□□□ 1.53
RNF40-201ENST00000324685 IL1RAPL2Q9NP60 686 aa24.6■■□□□ 1.53
RNF40-201ENST00000324685 ZNF76P36508 570 aa24.6■■□□□ 1.53
RNF40-201ENST00000324685 TMCO3Q6UWJ1 677 aa24.6■■□□□ 1.53
RNF40-201ENST00000324685 SYCE3A1L190 88 aa24.59■■□□□ 1.53
RNF40-201ENST00000324685 SLFN5Q08AF3 891 aa24.59■■□□□ 1.53
RNF40-201ENST00000324685 TAF3Q5VWG9 929 aa24.59■■□□□ 1.53
RNF40-201ENST00000324685 AIDAQ96BJ3 306 aa24.59■■□□□ 1.53
RNF40-201ENST00000324685 ANO10Q9NW15 660 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 POTEJP0CG39 1038 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 DDX54Q8TDD1 881 aaKnown RBP24.58■■□□□ 1.53
RNF40-201ENST00000324685 PPP1R12BO60237 982 aaPredicted RBP24.58■■□□□ 1.53
RNF40-201ENST00000324685 NBPF8Q3BBV2 869 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 CCDC183Q5T5S1 534 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 THEMISQ8N1K5 641 aaPredicted RBP24.58■■□□□ 1.53
RNF40-201ENST00000324685 KIF1BPQ96EK5 621 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 PKNOX2Q96KN3 472 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 SLC52A1Q9NWF4 448 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 EFCAB5A4FU69 1503 aa24.58■■□□□ 1.53
RNF40-201ENST00000324685 SFPQP23246 707 aaKnown RBP eCLIP24.58■■□□□ 1.52
RNF40-201ENST00000324685 RBM5P52756 815 aaKnown RBP eCLIP24.58■■□□□ 1.52
RNF40-201ENST00000324685 LRP2BPQ9P2M1 347 aa24.58■■□□□ 1.52
RNF40-201ENST00000324685 U3KPZ7 1027 aaPredicted RBP24.58■■□□□ 1.52
RNF40-201ENST00000324685 TMEM57Q8N5G2 664 aa24.57■■□□□ 1.52
RNF40-201ENST00000324685 CRACR2AQ9BSW2 395 aa24.57■■□□□ 1.52
RNF40-201ENST00000324685 IGHMBP2P38935 993 aaKnown RBP24.57■■□□□ 1.52
RNF40-201ENST00000324685 SPA17Q15506 151 aa24.57■■□□□ 1.52
RNF40-201ENST00000324685 MCM3P25205 808 aa24.57■■□□□ 1.52
RNF40-201ENST00000324685 PTPN14Q15678 1187 aa24.56■■□□□ 1.52
RNF40-201ENST00000324685 POLA1P09884 1462 aaPredicted RBP24.56■■□□□ 1.52
RNF40-201ENST00000324685 GLRX3O76003 335 aaKnown RBP24.56■■□□□ 1.52
RNF40-201ENST00000324685 MX1P20591 662 aa24.56■■□□□ 1.52
RNF40-201ENST00000324685 CETN2P41208 172 aa24.56■■□□□ 1.52
RNF40-201ENST00000324685 SCAND2PQ9GZW5 306 aaPredicted RBP24.56■■□□□ 1.52
RNF40-201ENST00000324685 MAP9Q49MG5 647 aa24.56■■□□□ 1.52
RNF40-201ENST00000324685 NUTM1Q86Y26 1132 aa24.56■■□□□ 1.52
RNF40-201ENST00000324685 SH2B1Q9NRF2 756 aaPredicted RBP24.56■■□□□ 1.52
RNF40-201ENST00000324685 AKAP2Q9Y2D5 859 aa24.56■■□□□ 1.52
RNF40-201ENST00000324685 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
RNF40-201ENST00000324685 DDX11Q96FC9 970 aa24.55■■□□□ 1.52
RNF40-201ENST00000324685 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.522e-7■■■■□ 25.2
RNF40-201ENST00000324685 ZNF287Q9HBT7 754 aa24.55■■□□□ 1.52
RNF40-201ENST00000324685 MPHOSPH10O00566 681 aaKnown RBP24.55■■□□□ 1.52
RNF40-201ENST00000324685 PHAXQ9H814 394 aaKnown RBP24.55■■□□□ 1.52
RNF40-201ENST00000324685 GNAT3A8MTJ3 354 aa24.55■■□□□ 1.52
RNF40-201ENST00000324685 FKBP15Q5T1M5 1219 aa24.54■■□□□ 1.52
RNF40-201ENST00000324685 SHTN1A0MZ66 631 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms