RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 ABHD8Q96I13 439 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 ARFGEF2Q9Y6D5 1785 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 CCDC88AQ3V6T2 1871 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 FOXN1O15353 648 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 GCP02774 474 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 ZC3H6P61129 1189 aaKnown RBP4.63□□□□□ -1.67
HIF1A-201ENST00000323441 COL23A1Q86Y22 540 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-201ENST00000323441 PRAM1Q96QH2 718 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 USP35Q9P2H5 1018 aa4.63□□□□□ -1.67
HIF1A-201ENST00000323441 NSD3Q9BZ95 1437 aa4.62□□□□□ -1.67
HIF1A-201ENST00000323441 SMC1BQ8NDV3 1235 aa4.62□□□□□ -1.67
HIF1A-201ENST00000323441 ZNF526Q8TF50 670 aaPredicted RBP4.62□□□□□ -1.67
HIF1A-201ENST00000323441 CNTNAP1P78357 1384 aa4.62□□□□□ -1.67
HIF1A-201ENST00000323441 ANKRD36BQ8N2N9 1353 aa4.62□□□□□ -1.67
HIF1A-201ENST00000323441 SCN4AP35499 1836 aa4.62□□□□□ -1.67
HIF1A-201ENST00000323441 LMOD2Q6P5Q4 547 aa4.62□□□□□ -1.67
HIF1A-201ENST00000323441 AXIN2Q9Y2T1 843 aa4.62□□□□□ -1.67
HIF1A-201ENST00000323441 STK26Q9P289 416 aa4.61□□□□□ -1.67
HIF1A-201ENST00000323441 RGPD2P0DJD1 1756 aa4.61□□□□□ -1.67
HIF1A-201ENST00000323441 PELP1Q8IZL8 1130 aaKnown RBP4.61□□□□□ -1.67
HIF1A-201ENST00000323441 FER1L6Q2WGJ9 1857 aa4.61□□□□□ -1.67
HIF1A-201ENST00000323441 RBBP6Q7Z6E9 1792 aaKnown RBP4.61□□□□□ -1.67
HIF1A-201ENST00000323441 CTCFP49711 727 aaPredicted RBP4.6□□□□□ -1.67
HIF1A-201ENST00000323441 ARHGEF25Q86VW2 580 aa4.6□□□□□ -1.67
HIF1A-201ENST00000323441 CREBZFQ9NS37 354 aa4.6□□□□□ -1.67
HIF1A-201ENST00000323441 WBP1LQ9NX94 342 aa4.6□□□□□ -1.67
HIF1A-201ENST00000323441 ACEP12821 1306 aa4.6□□□□□ -1.67
HIF1A-201ENST00000323441 PASKQ96RG2 1323 aa4.6□□□□□ -1.67
HIF1A-201ENST00000323441 EXOC5O00471 708 aa4.59□□□□□ -1.67
HIF1A-201ENST00000323441 HSPA8P11142 646 aaKnown RBP4.59□□□□□ -1.67
HIF1A-201ENST00000323441 TGFB2P61812 414 aa4.59□□□□□ -1.67
HIF1A-201ENST00000323441 FLAD1Q8NFF5 587 aa4.59□□□□□ -1.67
HIF1A-201ENST00000323441 NUDT16Q96DE0 195 aaKnown RBP4.59□□□□□ -1.67
HIF1A-201ENST00000323441 POTECB2RU33 542 aa4.59□□□□□ -1.68
HIF1A-201ENST00000323441 NLRP13Q86W25 1043 aa4.59□□□□□ -1.68
HIF1A-201ENST00000323441 KDM2BQ8NHM5 1336 aa4.58□□□□□ -1.68
HIF1A-201ENST00000323441 KCNA3P22001 575 aa4.58□□□□□ -1.68
HIF1A-201ENST00000323441 DCAF5Q96JK2 942 aa4.58□□□□□ -1.68
HIF1A-201ENST00000323441 AFDNP55196 1824 aaKnown RBP4.58□□□□□ -1.68
HIF1A-201ENST00000323441 NGDNQ8NEJ9 315 aaKnown RBP4.58□□□□□ -1.68
HIF1A-201ENST00000323441 TRPM7Q96QT4 1865 aa4.58□□□□□ -1.68
HIF1A-201ENST00000323441 INSRP06213 1382 aa4.58□□□□□ -1.68
HIF1A-201ENST00000323441 USP31Q70CQ4 1352 aa4.58□□□□□ -1.68
HIF1A-201ENST00000323441 TFCP2L1Q9NZI6 479 aa4.58□□□□□ -1.68
HIF1A-201ENST00000323441 HMGB2P26583 209 aaKnown RBP4.57□□□□□ -1.68
HIF1A-201ENST00000323441 CFAP70Q5T0N1 1121 aa4.57□□□□□ -1.68
HIF1A-201ENST00000323441 TOM1L2Q6ZVM7 507 aa4.57□□□□□ -1.68
HIF1A-201ENST00000323441 ERBB3P21860 1342 aa4.57□□□□□ -1.68
HIF1A-201ENST00000323441 BCORQ6W2J9 1755 aa4.57□□□□□ -1.68
HIF1A-201ENST00000323441 PAK3O75914 559 aaPredicted RBP4.57□□□□□ -1.68
HIF1A-201ENST00000323441 PRPF38BQ5VTL8 546 aaKnown RBP4.57□□□□□ -1.68
HIF1A-201ENST00000323441 AMIGO3Q86WK7 504 aa4.57□□□□□ -1.68
HIF1A-201ENST00000323441 PLEKHG5O94827 1062 aa4.56□□□□□ -1.68
HIF1A-201ENST00000323441 ABTB2Q8N961 1025 aa4.56□□□□□ -1.68
HIF1A-201ENST00000323441 KLHL34Q8N239 644 aa4.56□□□□□ -1.68
HIF1A-201ENST00000323441 RRAGCQ9HB90 399 aa4.56□□□□□ -1.68
HIF1A-201ENST00000323441 CCDC61Q9Y6R9 512 aa4.56□□□□□ -1.68
HIF1A-201ENST00000323441 C9orf131Q5VYM1 1079 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 C16orf71Q8IYS4 520 aaPredicted RBP4.55□□□□□ -1.68
HIF1A-201ENST00000323441 ACSBG1Q96GR2 724 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 HIRIP3Q9BW71 556 aaPredicted RBP4.55□□□□□ -1.68
HIF1A-201ENST00000323441 MEGF6O75095 1541 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 ANKRD26Q9UPS8 1709 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 NCAPD2Q15021 1401 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 RASSF10A6NK89 507 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 IL2RBP14784 551 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 TJP1Q07157 1748 aa4.55□□□□□ -1.68
HIF1A-201ENST00000323441 FAM50AQ14320 339 aaKnown RBP4.55□□□□□ -1.68
HIF1A-201ENST00000323441 ANKRD31Q8N7Z5 1873 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 LAMB1P07942 1786 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 MINK1Q8N4C8 1332 aaPredicted RBP4.54□□□□□ -1.68
HIF1A-201ENST00000323441 SSFA2P28290 1259 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 LBX1P52954 281 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 APLP2Q06481 763 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 NUTM2GQ5VZR2 741 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 COL11A2P13942 1736 aaPredicted RBP4.54□□□□□ -1.68
HIF1A-201ENST00000323441 GLTPD2A6NH11 291 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 MSL1Q68DK7 614 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 KCNH5Q8NCM2 988 aa4.54□□□□□ -1.68
HIF1A-201ENST00000323441 VEGFBP49765 207 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 CDK19Q9BWU1 502 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 POGKQ9P215 609 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 CCNL1Q9UK58 526 aaPredicted RBP4.53□□□□□ -1.68
HIF1A-201ENST00000323441 SCN11AQ9UI33 1791 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 CD163L1Q9NR16 1453 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 SMG6Q86US8 1419 aaKnown RBP4.53□□□□□ -1.68
HIF1A-201ENST00000323441 MYH14Q7Z406 1995 aaKnown RBP4.53□□□□□ -1.68
HIF1A-201ENST00000323441 KDRP35968 1356 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 VEGFAP15692 232 aaPredicted RBP4.53□□□□□ -1.68
HIF1A-201ENST00000323441 MAPK8IP2Q13387 824 aaPredicted RBP4.53□□□□□ -1.68
HIF1A-201ENST00000323441 STAC3Q96MF2 364 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 TTC21AQ8NDW8 1320 aa4.53□□□□□ -1.68
HIF1A-201ENST00000323441 KCNQ4P56696 695 aa4.52□□□□□ -1.69
HIF1A-201ENST00000323441 C1QBPQ07021 282 aaKnown RBP4.52□□□□□ -1.69
HIF1A-201ENST00000323441 ITGBL1O95965 494 aaPredicted RBP4.52□□□□□ -1.69
HIF1A-201ENST00000323441 SAFB2Q14151 953 aaKnown RBP eCLIP4.52□□□□□ -1.69
HIF1A-201ENST00000323441 MAP3K19Q56UN5 1328 aa4.51□□□□□ -1.69
HIF1A-201ENST00000323441 PITPNM2Q9BZ72 1349 aa4.51□□□□□ -1.69
HIF1A-201ENST00000323441 CHADLQ6NUI6 762 aa4.51□□□□□ -1.69
HIF1A-201ENST00000323441 USP47Q96K76 1375 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms