RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
CCDC65-202ENST00000320516 ZCRB1Q8TBF4 217 aaKnown RBP13.63□□□□□ -0.23
CCDC65-202ENST00000320516 DDX54Q8TDD1 881 aaKnown RBP13.63□□□□□ -0.23
CCDC65-202ENST00000320516 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
CCDC65-202ENST00000320516 PER1O15534 1290 aaPredicted RBP13.63□□□□□ -0.23
CCDC65-202ENST00000320516 TNNT2P45379 298 aaPredicted RBP13.63□□□□□ -0.23
CCDC65-202ENST00000320516 R3HDM1Q15032 1099 aaKnown RBP13.63□□□□□ -0.23
CCDC65-202ENST00000320516 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
CCDC65-202ENST00000320516 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
CCDC65-202ENST00000320516 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
CCDC65-202ENST00000320516 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
CCDC65-202ENST00000320516 EYA1Q99502 592 aa13.6□□□□□ -0.23
CCDC65-202ENST00000320516 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
CCDC65-202ENST00000320516 EIF4A2Q14240 407 aaKnown RBP13.6□□□□□ -0.23
CCDC65-202ENST00000320516 TXNRD1Q16881 649 aa13.59□□□□□ -0.23
CCDC65-202ENST00000320516 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
CCDC65-202ENST00000320516 BTAF1O14981 1849 aa13.59□□□□□ -0.23
CCDC65-202ENST00000320516 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.23
CCDC65-202ENST00000320516 LRP5O75197 1615 aa13.58□□□□□ -0.24
CCDC65-202ENST00000320516 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.24
CCDC65-202ENST00000320516 DOT1LQ8TEK3 1739 aa13.57□□□□□ -0.24
CCDC65-202ENST00000320516 CYP27B1O15528 508 aa13.57□□□□□ -0.24
CCDC65-202ENST00000320516 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
CCDC65-202ENST00000320516 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
CCDC65-202ENST00000320516 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
CCDC65-202ENST00000320516 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
CCDC65-202ENST00000320516 KAT6BQ8WYB5 2073 aa13.56□□□□□ -0.24
CCDC65-202ENST00000320516 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
CCDC65-202ENST00000320516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC65-202ENST00000320516 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
CCDC65-202ENST00000320516 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
CCDC65-202ENST00000320516 PAPPAQ13219 1627 aa13.54□□□□□ -0.24
CCDC65-202ENST00000320516 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
CCDC65-202ENST00000320516 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
CCDC65-202ENST00000320516 CC2D1BQ5T0F9 858 aaKnown RBP13.53□□□□□ -0.24
CCDC65-202ENST00000320516 SPG7Q9UQ90 795 aa13.53□□□□□ -0.24
CCDC65-202ENST00000320516 TOGARAM1Q9Y4F4 1720 aa13.52□□□□□ -0.24
CCDC65-202ENST00000320516 IL13P35225 146 aa13.52□□□□□ -0.25
CCDC65-202ENST00000320516 SLC15A2Q16348 729 aa13.52□□□□□ -0.25
CCDC65-202ENST00000320516 CASZ1Q86V15 1759 aa13.51□□□□□ -0.25
CCDC65-202ENST00000320516 LY75O60449 1722 aa13.51□□□□□ -0.25
CCDC65-202ENST00000320516 MTHFSP49914 203 aa13.51□□□□□ -0.25
CCDC65-202ENST00000320516 SLC27A3Q5K4L6 730 aa13.51□□□□□ -0.25
CCDC65-202ENST00000320516 PDGFDQ9GZP0 370 aaPredicted RBP13.5□□□□□ -0.25
CCDC65-202ENST00000320516 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
CCDC65-202ENST00000320516 KDRP35968 1356 aa13.5□□□□□ -0.25
CCDC65-202ENST00000320516 PHKG2P15735 406 aa13.5□□□□□ -0.25
CCDC65-202ENST00000320516 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
CCDC65-202ENST00000320516 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
CCDC65-202ENST00000320516 ZNF827Q17R98 1081 aa13.48□□□□□ -0.25
CCDC65-202ENST00000320516 ITGB4P16144 1822 aa13.48□□□□□ -0.25
CCDC65-202ENST00000320516 KCNQ4P56696 695 aa13.48□□□□□ -0.25
CCDC65-202ENST00000320516 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
CCDC65-202ENST00000320516 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
CCDC65-202ENST00000320516 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
CCDC65-202ENST00000320516 PIGBQ92521 554 aa13.47□□□□□ -0.25
CCDC65-202ENST00000320516 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
CCDC65-202ENST00000320516 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
CCDC65-202ENST00000320516 SPON1Q9HCB6 807 aa13.46□□□□□ -0.25
CCDC65-202ENST00000320516 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
CCDC65-202ENST00000320516 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
CCDC65-202ENST00000320516 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
CCDC65-202ENST00000320516 DIAPH1O60610 1272 aaKnown RBP13.44□□□□□ -0.26
CCDC65-202ENST00000320516 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
CCDC65-202ENST00000320516 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
CCDC65-202ENST00000320516 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
CCDC65-202ENST00000320516 KDM6AO15550 1401 aaPredicted RBP13.43□□□□□ -0.26
CCDC65-202ENST00000320516 HSP90AB1P08238 724 aaKnown RBP13.43□□□□□ -0.26
CCDC65-202ENST00000320516 PTGER2P43116 358 aa13.43□□□□□ -0.26
CCDC65-202ENST00000320516 ZNF530Q6P9A1 599 aaPredicted RBP13.43□□□□□ -0.26
CCDC65-202ENST00000320516 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
CCDC65-202ENST00000320516 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
CCDC65-202ENST00000320516 TMOD3Q9NYL9 352 aa13.43□□□□□ -0.26
CCDC65-202ENST00000320516 ERVV-2B6SEH9 535 aa13.42□□□□□ -0.26
CCDC65-202ENST00000320516 HMOX1P09601 288 aa13.42□□□□□ -0.26
CCDC65-202ENST00000320516 SGIP1Q9BQI5 828 aa13.42□□□□□ -0.26
CCDC65-202ENST00000320516 MTFR1LQ9H019 292 aa13.42□□□□□ -0.26
CCDC65-202ENST00000320516 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
CCDC65-202ENST00000320516 TUBGCP6Q96RT7 1819 aa13.41□□□□□ -0.26
CCDC65-202ENST00000320516 C5P01031 1676 aa13.41□□□□□ -0.26
CCDC65-202ENST00000320516 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
CCDC65-202ENST00000320516 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
CCDC65-202ENST00000320516 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
CCDC65-202ENST00000320516 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
CCDC65-202ENST00000320516 PPP2R1AP30153 589 aa13.4□□□□□ -0.26
CCDC65-202ENST00000320516 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
CCDC65-202ENST00000320516 LOC102724428A0A0B4J2F2 783 aa13.39□□□□□ -0.27
CCDC65-202ENST00000320516 SIK1P57059 783 aa13.39□□□□□ -0.27
CCDC65-202ENST00000320516 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
CCDC65-202ENST00000320516 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
CCDC65-202ENST00000320516 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
CCDC65-202ENST00000320516 AKAP4Q5JQC9 854 aa13.38□□□□□ -0.27
CCDC65-202ENST00000320516 PPP1R1BQ9UD71 204 aaPredicted RBP13.38□□□□□ -0.27
CCDC65-202ENST00000320516 MTHFSDQ2M296 383 aaKnown RBP13.37□□□□□ -0.27
CCDC65-202ENST00000320516 C4BP0C0L5 1744 aa13.37□□□□□ -0.27
CCDC65-202ENST00000320516 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
CCDC65-202ENST00000320516 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
CCDC65-202ENST00000320516 CABP4P57796 275 aa13.37□□□□□ -0.27
CCDC65-202ENST00000320516 ITPK1Q13572 414 aa13.37□□□□□ -0.27
CCDC65-202ENST00000320516 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms