RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 ANKRD36BQ8N2N9 1353 aa25.46■■□□□ 1.67
SWI5-201ENST00000320188 LTV1Q96GA3 475 aaPredicted RBP25.46■■□□□ 1.67
SWI5-201ENST00000320188 SLC12A5Q9H2X9 1139 aa25.46■■□□□ 1.67
SWI5-201ENST00000320188 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
SWI5-201ENST00000320188 GRIN3BO60391 1043 aa25.4■■□□□ 1.66
SWI5-201ENST00000320188 KCNQ4P56696 695 aa25.4■■□□□ 1.66
SWI5-201ENST00000320188 NLGN2Q8NFZ4 835 aa25.4■■□□□ 1.66
SWI5-201ENST00000320188 CCNL1Q9UK58 526 aaPredicted RBP25.4■■□□□ 1.66
SWI5-201ENST00000320188 MSH5O43196 834 aa25.39■■□□□ 1.66
SWI5-201ENST00000320188 AMPHP49418 695 aa25.39■■□□□ 1.66
SWI5-201ENST00000320188 COG3Q96JB2 828 aa25.39■■□□□ 1.66
SWI5-201ENST00000320188 PUS7Q96PZ0 661 aaKnown RBP25.39■■□□□ 1.66
SWI5-201ENST00000320188 NSD2O96028 1365 aa25.39■■□□□ 1.65
SWI5-201ENST00000320188 C5P01031 1676 aa25.39■■□□□ 1.65
SWI5-201ENST00000320188 ZCRB1Q8TBF4 217 aaKnown RBP25.38■■□□□ 1.65
SWI5-201ENST00000320188 USP47Q96K76 1375 aa25.37■■□□□ 1.65
SWI5-201ENST00000320188 MEGF6O75095 1541 aa25.37■■□□□ 1.65
SWI5-201ENST00000320188 MAP3K19Q56UN5 1328 aa25.37■■□□□ 1.65
SWI5-201ENST00000320188 HOXC9P31274 260 aa25.36■■□□□ 1.65
SWI5-201ENST00000320188 TAF1LQ8IZX4 1826 aa25.35■■□□□ 1.65
SWI5-201ENST00000320188 RTL1A6NKG5 1358 aa25.34■■□□□ 1.65
SWI5-201ENST00000320188 HMGB2P26583 209 aaKnown RBP25.34■■□□□ 1.65
SWI5-201ENST00000320188 SMG6Q86US8 1419 aaKnown RBP25.33■■□□□ 1.65
SWI5-201ENST00000320188 CGNL1Q0VF96 1302 aa25.32■■□□□ 1.64
SWI5-201ENST00000320188 YBX3P16989 372 aaKnown RBP eCLIP25.31■■□□□ 1.64
SWI5-201ENST00000320188 COL23A1Q86Y22 540 aaPredicted RBP25.3■■□□□ 1.64
SWI5-201ENST00000320188 RAPGEF4Q8WZA2 1011 aa25.29■■□□□ 1.64
SWI5-201ENST00000320188 MSL1Q68DK7 614 aa25.28■■□□□ 1.64
SWI5-201ENST00000320188 TONSLQ96HA7 1378 aa25.28■■□□□ 1.64
SWI5-201ENST00000320188 CEP350Q5VT06 3117 aa25.28■■□□□ 1.64
SWI5-201ENST00000320188 SLC24A1O60721 1099 aa25.27■■□□□ 1.64
SWI5-201ENST00000320188 FLAD1Q8NFF5 587 aa25.27■■□□□ 1.64
SWI5-201ENST00000320188 ATP10DQ9P241 1426 aa25.27■■□□□ 1.64
SWI5-201ENST00000320188 ITGB4P16144 1822 aa25.26■■□□□ 1.63
SWI5-201ENST00000320188 KIF20BQ96Q89 1820 aa25.26■■□□□ 1.63
SWI5-201ENST00000320188 IFFO2Q5TF58 517 aa25.25■■□□□ 1.63
SWI5-201ENST00000320188 CD2APQ9Y5K6 639 aa25.25■■□□□ 1.63
SWI5-201ENST00000320188 PCDH11XQ9BZA7 1347 aa25.25■■□□□ 1.63
SWI5-201ENST00000320188 PCDH11YQ9BZA8 1340 aa25.25■■□□□ 1.63
SWI5-201ENST00000320188 TATP17735 454 aaPredicted RBP25.24■■□□□ 1.63
SWI5-201ENST00000320188 C4BP0C0L5 1744 aa25.23■■□□□ 1.63
SWI5-201ENST00000320188 FBLN1P23142 703 aa25.23■■□□□ 1.63
SWI5-201ENST00000320188 NBPF6Q5VWK0 638 aa25.23■■□□□ 1.63
SWI5-201ENST00000320188 NBPF4Q96M43 638 aa25.23■■□□□ 1.63
SWI5-201ENST00000320188 PALLDQ8WX93 1383 aa25.22■■□□□ 1.63
SWI5-201ENST00000320188 UBR3Q6ZT12 1888 aa25.22■■□□□ 1.63
SWI5-201ENST00000320188 RRS1Q15050 365 aaKnown RBP25.22■■□□□ 1.63
SWI5-201ENST00000320188 USHBP1Q8N6Y0 703 aa25.22■■□□□ 1.63
SWI5-201ENST00000320188 GPBP1L1Q9HC44 474 aaPredicted RBP25.22■■□□□ 1.63
SWI5-201ENST00000320188 TESK2Q96S53 571 aa25.2■■□□□ 1.62
SWI5-201ENST00000320188 TOGARAM1Q9Y4F4 1720 aa25.2■■□□□ 1.62
SWI5-201ENST00000320188 NSD3Q9BZ95 1437 aa25.2■■□□□ 1.62
SWI5-201ENST00000320188 PKD1L3Q7Z443 1732 aa25.18■■□□□ 1.62
SWI5-201ENST00000320188 ST20-MTHFSA0A0A6YYL1 179 aa25.18■■□□□ 1.62
SWI5-201ENST00000320188 AK7Q96M32 723 aa25.18■■□□□ 1.62
SWI5-201ENST00000320188 MPRIPQ6WCQ1 1025 aa25.17■■□□□ 1.62
SWI5-201ENST00000320188 SMARCC1Q92922 1105 aaPredicted RBP25.17■■□□□ 1.62
SWI5-201ENST00000320188 ADCY9O60503 1353 aa25.17■■□□□ 1.62
SWI5-201ENST00000320188 INSRP06213 1382 aa25.17■■□□□ 1.62
SWI5-201ENST00000320188 GGNBP2Q9H3C7 697 aa25.16■■□□□ 1.62
SWI5-201ENST00000320188 FLT4P35916 1363 aa25.16■■□□□ 1.62
SWI5-201ENST00000320188 KIF24Q5T7B8 1368 aa25.15■■□□□ 1.62
SWI5-201ENST00000320188 FYB1O15117 783 aa25.14■■□□□ 1.62
SWI5-201ENST00000320188 ZNF526Q8TF50 670 aaPredicted RBP25.13■■□□□ 1.61
SWI5-201ENST00000320188 IGSF1Q8N6C5 1336 aa25.12■■□□□ 1.61
SWI5-201ENST00000320188 PHF14O94880 888 aa25.11■■□□□ 1.61
SWI5-201ENST00000320188 HSPA6P17066 643 aa25.11■■□□□ 1.61
SWI5-201ENST00000320188 HSP90AB2PQ58FF8 381 aa25.11■■□□□ 1.61
SWI5-201ENST00000320188 MAP2P11137 1827 aaKnown RBP25.11■■□□□ 1.61
SWI5-201ENST00000320188 TMF1P82094 1093 aa25.1■■□□□ 1.61
SWI5-201ENST00000320188 CYP27B1O15528 508 aa25.09■■□□□ 1.61
SWI5-201ENST00000320188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.08■■□□□ 1.61
SWI5-201ENST00000320188 SSFA2P28290 1259 aa25.07■■□□□ 1.6
SWI5-201ENST00000320188 ANKRD26Q9UPS8 1709 aa25.06■■□□□ 1.6
SWI5-201ENST00000320188 WWC3Q9ULE0 1092 aa25.05■■□□□ 1.6
SWI5-201ENST00000320188 CICQ96RK0 1608 aaPredicted RBP25.04■■□□□ 1.6
SWI5-201ENST00000320188 CDCA8Q53HL2 280 aa25.04■■□□□ 1.6
SWI5-201ENST00000320188 PIGBQ92521 554 aa25.04■■□□□ 1.6
SWI5-201ENST00000320188 SPG7Q9UQ90 795 aa25.04■■□□□ 1.6
SWI5-201ENST00000320188 KIF13BQ9NQT8 1826 aa25.04■■□□□ 1.6
SWI5-201ENST00000320188 LOC102724428A0A0B4J2F2 783 aa25.03■■□□□ 1.6
SWI5-201ENST00000320188 SIK1P57059 783 aa25.03■■□□□ 1.6
SWI5-201ENST00000320188 AMIGO3Q86WK7 504 aa25.03■■□□□ 1.6
SWI5-201ENST00000320188 NCAPD2Q15021 1401 aa25.02■■□□□ 1.6
SWI5-201ENST00000320188 NKX1-1Q15270 411 aaPredicted RBP25.01■■□□□ 1.59
SWI5-201ENST00000320188 TMOD3Q9NYL9 352 aa25.01■■□□□ 1.59
SWI5-201ENST00000320188 LINC00116Q8NCU8 138 aa25■■□□□ 1.59
SWI5-201ENST00000320188 N4BP2Q86UW6 1770 aaPredicted RBP25■■□□□ 1.59
SWI5-201ENST00000320188 GNPATO15228 680 aa24.99■■□□□ 1.59
SWI5-201ENST00000320188 EMILIN1Q9Y6C2 1016 aa24.99■■□□□ 1.59
SWI5-201ENST00000320188 PPM1GO15355 546 aaPredicted RBP24.98■■□□□ 1.59
SWI5-201ENST00000320188 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
SWI5-201ENST00000320188 KIAA1551Q9HCM1 1747 aa24.96■■□□□ 1.59
SWI5-201ENST00000320188 ATP6V1AP38606 617 aa24.96■■□□□ 1.59
SWI5-201ENST00000320188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.96■■□□□ 1.59
SWI5-201ENST00000320188 KIF3CO14782 793 aa24.95■■□□□ 1.58
SWI5-201ENST00000320188 ZNF831Q5JPB2 1677 aa24.94■■□□□ 1.58
SWI5-201ENST00000320188 MMP10P09238 476 aa24.94■■□□□ 1.58
SWI5-201ENST00000320188 ASAP1Q9ULH1 1129 aa24.94■■□□□ 1.58
SWI5-201ENST00000320188 PXDNLA1KZ92 1463 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms