RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
PRPF18-201ENST00000320054 OVOS2A0A0G2JMS6 1433 aa17.94■□□□□ 0.46
PRPF18-201ENST00000320054 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
PRPF18-201ENST00000320054 DISP2A7MBM2 1401 aa17.93■□□□□ 0.46
PRPF18-201ENST00000320054 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
PRPF18-201ENST00000320054 GAS2L2Q8NHY3 880 aa17.93■□□□□ 0.46
PRPF18-201ENST00000320054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRPF18-201ENST00000320054 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
PRPF18-201ENST00000320054 ATRNO75882 1429 aa17.91■□□□□ 0.46
PRPF18-201ENST00000320054 IL2RBP14784 551 aa17.91■□□□□ 0.46
PRPF18-201ENST00000320054 MTHFSDQ2M296 383 aaKnown RBP17.91■□□□□ 0.46
PRPF18-201ENST00000320054 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
PRPF18-201ENST00000320054 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
PRPF18-201ENST00000320054 RIPK4P57078 832 aa17.9■□□□□ 0.46
PRPF18-201ENST00000320054 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
PRPF18-201ENST00000320054 SCN11AQ9UI33 1791 aa17.89■□□□□ 0.45
PRPF18-201ENST00000320054 GLI3P10071 1580 aa17.89■□□□□ 0.45
PRPF18-201ENST00000320054 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
PRPF18-201ENST00000320054 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
PRPF18-201ENST00000320054 SPG7Q9UQ90 795 aa17.89■□□□□ 0.45
PRPF18-201ENST00000320054 RRP7AQ9Y3A4 280 aaKnown RBP17.89■□□□□ 0.45
PRPF18-201ENST00000320054 ZNF521Q96K83 1311 aa17.89■□□□□ 0.45
PRPF18-201ENST00000320054 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
PRPF18-201ENST00000320054 THSD7AQ9UPZ6 1657 aa17.88■□□□□ 0.45
PRPF18-201ENST00000320054 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
PRPF18-201ENST00000320054 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
PRPF18-201ENST00000320054 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
PRPF18-201ENST00000320054 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
PRPF18-201ENST00000320054 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
PRPF18-201ENST00000320054 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
PRPF18-201ENST00000320054 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
PRPF18-201ENST00000320054 MAP3K5Q99683 1374 aa17.87■□□□□ 0.45
PRPF18-201ENST00000320054 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
PRPF18-201ENST00000320054 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
PRPF18-201ENST00000320054 ZCRB1Q8TBF4 217 aaKnown RBP17.86■□□□□ 0.45
PRPF18-201ENST00000320054 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
PRPF18-201ENST00000320054 GNAT3A8MTJ3 354 aa17.85■□□□□ 0.45
PRPF18-201ENST00000320054 PDE3BQ13370 1112 aa17.85■□□□□ 0.45
PRPF18-201ENST00000320054 AKAP4Q5JQC9 854 aa17.85■□□□□ 0.45
PRPF18-201ENST00000320054 ZNF772Q68DY9 489 aaPredicted RBP17.85■□□□□ 0.45
PRPF18-201ENST00000320054 SIPA1L3O60292 1781 aaPredicted RBP17.84■□□□□ 0.45
PRPF18-201ENST00000320054 TNS2Q63HR2 1409 aa17.84■□□□□ 0.45
PRPF18-201ENST00000320054 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
PRPF18-201ENST00000320054 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
PRPF18-201ENST00000320054 C1orf141Q5JVX7 400 aa17.84■□□□□ 0.45
PRPF18-201ENST00000320054 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
PRPF18-201ENST00000320054 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
PRPF18-201ENST00000320054 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.44
PRPF18-201ENST00000320054 IL16Q14005 1332 aa17.82■□□□□ 0.44
PRPF18-201ENST00000320054 PHKG2P15735 406 aa17.82■□□□□ 0.44
PRPF18-201ENST00000320054 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
PRPF18-201ENST00000320054 RTF1Q92541 710 aaKnown RBP17.82■□□□□ 0.44
PRPF18-201ENST00000320054 QTRT2Q9H974 415 aaKnown RBP17.82■□□□□ 0.44
PRPF18-201ENST00000320054 EXOC5O00471 708 aa17.81■□□□□ 0.44
PRPF18-201ENST00000320054 CYP27B1O15528 508 aa17.81■□□□□ 0.44
PRPF18-201ENST00000320054 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
PRPF18-201ENST00000320054 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
PRPF18-201ENST00000320054 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
PRPF18-201ENST00000320054 FAM98CQ17RN3 349 aaKnown RBP17.8■□□□□ 0.44
PRPF18-201ENST00000320054 ILDR1Q86SU0 546 aaPredicted RBP17.8■□□□□ 0.44
PRPF18-201ENST00000320054 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
PRPF18-201ENST00000320054 NKX1-1Q15270 411 aaPredicted RBP17.79■□□□□ 0.44
PRPF18-201ENST00000320054 DDB1Q16531 1140 aa17.79■□□□□ 0.44
PRPF18-201ENST00000320054 ITGB4P16144 1822 aa17.79■□□□□ 0.44
PRPF18-201ENST00000320054 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
PRPF18-201ENST00000320054 BRWD3Q6RI45 1802 aa17.78■□□□□ 0.44
PRPF18-201ENST00000320054 MCM10Q7L590 875 aa17.78■□□□□ 0.44
PRPF18-201ENST00000320054 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
PRPF18-201ENST00000320054 MRC1P22897 1456 aa17.77■□□□□ 0.44
PRPF18-201ENST00000320054 KDM3BQ7LBC6 1761 aa17.77■□□□□ 0.44
PRPF18-201ENST00000320054 E9PSI1 815 aa17.77■□□□□ 0.44
PRPF18-201ENST00000320054 RNMTO43148 476 aaKnown RBP17.77■□□□□ 0.44
PRPF18-201ENST00000320054 SLFN5Q08AF3 891 aa17.77■□□□□ 0.44
PRPF18-201ENST00000320054 DCTN1Q14203 1278 aa17.77■□□□□ 0.44
PRPF18-201ENST00000320054 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
PRPF18-201ENST00000320054 KDM6AO15550 1401 aaPredicted RBP17.77■□□□□ 0.44
PRPF18-201ENST00000320054 RBM6P78332 1123 aaKnown RBP17.76■□□□□ 0.43
PRPF18-201ENST00000320054 MPRIPQ6WCQ1 1025 aa17.76■□□□□ 0.43
PRPF18-201ENST00000320054 TRMT2AQ8IZ69 625 aaKnown RBP17.76■□□□□ 0.43
PRPF18-201ENST00000320054 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
PRPF18-201ENST00000320054 DOT1LQ8TEK3 1739 aa17.75■□□□□ 0.43
PRPF18-201ENST00000320054 ZNF853P0CG23 659 aa17.75■□□□□ 0.43
PRPF18-201ENST00000320054 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
PRPF18-201ENST00000320054 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
PRPF18-201ENST00000320054 LGR6Q9HBX8 967 aa17.75■□□□□ 0.43
PRPF18-201ENST00000320054 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
PRPF18-201ENST00000320054 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
PRPF18-201ENST00000320054 GNAI1P63096 354 aa17.74■□□□□ 0.43
PRPF18-201ENST00000320054 BABAM1Q9NWV8 329 aa17.74■□□□□ 0.43
PRPF18-201ENST00000320054 RGS17Q9UGC6 210 aaPredicted RBP17.74■□□□□ 0.43
PRPF18-201ENST00000320054 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
PRPF18-201ENST00000320054 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
PRPF18-201ENST00000320054 SPINK5Q9NQ38 1064 aaPredicted RBP17.73■□□□□ 0.43
PRPF18-201ENST00000320054 SBF2Q86WG5 1849 aa17.72■□□□□ 0.43
PRPF18-201ENST00000320054 ERVV-2B6SEH9 535 aa17.72■□□□□ 0.43
PRPF18-201ENST00000320054 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
PRPF18-201ENST00000320054 TEFQ10587 303 aa17.72■□□□□ 0.43
PRPF18-201ENST00000320054 CHL1O00533 1208 aa17.71■□□□□ 0.43
PRPF18-201ENST00000320054 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
PRPF18-201ENST00000320054 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms