RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 NPHP1O15259 732 aa17.29■□□□□ 0.36
PABPC1-201ENST00000318607 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
PABPC1-201ENST00000318607 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
PABPC1-201ENST00000318607 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
PABPC1-201ENST00000318607 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
PABPC1-201ENST00000318607 ZNF592Q92610 1267 aa17.29■□□□□ 0.36
PABPC1-201ENST00000318607 CDK19Q9BWU1 502 aa17.29■□□□□ 0.36
PABPC1-201ENST00000318607 DIP2CQ9Y2E4 1556 aa17.28■□□□□ 0.36
PABPC1-201ENST00000318607 DDIT3P35638 169 aa17.28■□□□□ 0.36
PABPC1-201ENST00000318607 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
PABPC1-201ENST00000318607 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
PABPC1-201ENST00000318607 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
PABPC1-201ENST00000318607 PALD1Q9ULE6 856 aa17.28■□□□□ 0.36
PABPC1-201ENST00000318607 ZDHHC9Q9Y397 364 aa17.28■□□□□ 0.36
PABPC1-201ENST00000318607 ZBTB9Q96C00 473 aa17.27■□□□□ 0.36
PABPC1-201ENST00000318607 PTMSP20962 102 aa17.27■□□□□ 0.36
PABPC1-201ENST00000318607 STAC3Q96MF2 364 aa17.27■□□□□ 0.36
PABPC1-201ENST00000318607 NOL7Q9UMY1 257 aaKnown RBP17.27■□□□□ 0.36
PABPC1-201ENST00000318607 RAPGEF3O95398 923 aa17.27■□□□□ 0.35
PABPC1-201ENST00000318607 FOSBP53539 338 aa17.27■□□□□ 0.35
PABPC1-201ENST00000318607 FERMT3Q86UX7 667 aa17.27■□□□□ 0.35
PABPC1-201ENST00000318607 CCDC39Q9UFE4 941 aa17.27■□□□□ 0.35
PABPC1-201ENST00000318607 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 REC8O95072 547 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 CAMK4Q16566 473 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
PABPC1-201ENST00000318607 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
PABPC1-201ENST00000318607 GNAI1P63096 354 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 GIMAP6Q6P9H5 292 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 NUTM1Q86Y26 1132 aa17.26■□□□□ 0.35
PABPC1-201ENST00000318607 C14orf93Q9H972 538 aaKnown RBP17.25■□□□□ 0.35
PABPC1-201ENST00000318607 LRSAM1Q6UWE0 723 aa17.25■□□□□ 0.35
PABPC1-201ENST00000318607 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.25■□□□□ 0.35
PABPC1-201ENST00000318607 A0A1W2PP64 1363 aa17.25■□□□□ 0.35
PABPC1-201ENST00000318607 ERC2O15083 957 aa17.24■□□□□ 0.35
PABPC1-201ENST00000318607 PPP4R3BQ5MIZ7 849 aa17.24■□□□□ 0.35
PABPC1-201ENST00000318607 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
PABPC1-201ENST00000318607 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
PABPC1-201ENST00000318607 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
PABPC1-201ENST00000318607 NFE2L2Q16236 605 aa17.24■□□□□ 0.35
PABPC1-201ENST00000318607 NPC1L1Q9UHC9 1359 aa17.24■□□□□ 0.35
PABPC1-201ENST00000318607 ADCY5O95622 1261 aa17.23■□□□□ 0.35
PABPC1-201ENST00000318607 USP48Q86UV5 1035 aa17.23■□□□□ 0.35
PABPC1-201ENST00000318607 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
PABPC1-201ENST00000318607 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
PABPC1-201ENST00000318607 FAM173BQ6P4H8 233 aa17.22■□□□□ 0.35
PABPC1-201ENST00000318607 G2E3Q7L622 706 aa17.22■□□□□ 0.35
PABPC1-201ENST00000318607 FKBP5Q13451 457 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-201ENST00000318607 C14orf37Q86TY3 774 aa17.22■□□□□ 0.35
PABPC1-201ENST00000318607 KCNJ4P48050 445 aa17.22■□□□□ 0.35
PABPC1-201ENST00000318607 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-201ENST00000318607 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
PABPC1-201ENST00000318607 TCEANC2Q96MN5 208 aa17.22■□□□□ 0.35
PABPC1-201ENST00000318607 FOXO3O43524 673 aa17.21■□□□□ 0.35
PABPC1-201ENST00000318607 IDI1Q13907 227 aa17.21■□□□□ 0.35
PABPC1-201ENST00000318607 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
PABPC1-201ENST00000318607 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
PABPC1-201ENST00000318607 CT47B1P0C2W7 299 aaPredicted RBP17.21■□□□□ 0.35
PABPC1-201ENST00000318607 ZNF445P59923 1031 aa17.21■□□□□ 0.35
PABPC1-201ENST00000318607 SASS6Q6UVJ0 657 aa17.21■□□□□ 0.35
PABPC1-201ENST00000318607 FCHSD2O94868 740 aa17.2■□□□□ 0.34
PABPC1-201ENST00000318607 CHMP4AQ9BY43 222 aa17.2■□□□□ 0.34
PABPC1-201ENST00000318607 MCCP23508 829 aa17.2■□□□□ 0.34
PABPC1-201ENST00000318607 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
PABPC1-201ENST00000318607 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
PABPC1-201ENST00000318607 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
PABPC1-201ENST00000318607 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
PABPC1-201ENST00000318607 SETD1AO15047 1707 aaKnown RBP17.2■□□□□ 0.34
PABPC1-201ENST00000318607 EIF2S2P20042 333 aaKnown RBP17.19■□□□□ 0.34
PABPC1-201ENST00000318607 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.19■□□□□ 0.34
PABPC1-201ENST00000318607 V9GYY5 206 aaPredicted RBP17.19■□□□□ 0.34
PABPC1-201ENST00000318607 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
PABPC1-201ENST00000318607 FANCAO15360 1455 aa17.18■□□□□ 0.34
PABPC1-201ENST00000318607 CKAP2LQ8IYA6 745 aa17.18■□□□□ 0.34
PABPC1-201ENST00000318607 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
PABPC1-201ENST00000318607 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
PABPC1-201ENST00000318607 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
PABPC1-201ENST00000318607 SYAP1Q96A49 352 aaPredicted RBP17.18■□□□□ 0.34
PABPC1-201ENST00000318607 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
PABPC1-201ENST00000318607 NOLC1Q14978 699 aaKnown RBP eCLIP17.17■□□□□ 0.349e-10■■■■□ 20.6
PABPC1-201ENST00000318607 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
PABPC1-201ENST00000318607 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
PABPC1-201ENST00000318607 SPHKAPQ2M3C7 1700 aa17.17■□□□□ 0.34
PABPC1-201ENST00000318607 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
PABPC1-201ENST00000318607 ADGRL1O94910 1474 aa17.17■□□□□ 0.34
PABPC1-201ENST00000318607 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.341e-22■□□□□ 11.3
PABPC1-201ENST00000318607 TAF7LQ5H9L4 462 aa17.17■□□□□ 0.34
PABPC1-201ENST00000318607 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
PABPC1-201ENST00000318607 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-201ENST00000318607 TRERF1Q96PN7 1200 aa17.16■□□□□ 0.34
PABPC1-201ENST00000318607 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
PABPC1-201ENST00000318607 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-201ENST00000318607 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
PABPC1-201ENST00000318607 PDE1AP54750 535 aa17.15■□□□□ 0.34
PABPC1-201ENST00000318607 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
PABPC1-201ENST00000318607 STK3Q13188 491 aa17.15■□□□□ 0.34
PABPC1-201ENST00000318607 ZNF771Q7L3S4 317 aaPredicted RBP17.15■□□□□ 0.34
PABPC1-201ENST00000318607 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms