RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 K7ELQ4 463 aaPredicted RBP16.44■□□□□ 0.22
EDEM3-201ENST00000318130 IDH1O75874 414 aaKnown RBP16.44■□□□□ 0.22
EDEM3-201ENST00000318130 LIG1P18858 919 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 CUX1P39880 1505 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 ZNF76P36508 570 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 CRACR2BQ8N4Y2 399 aaPredicted RBP16.44■□□□□ 0.22
EDEM3-201ENST00000318130 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
EDEM3-201ENST00000318130 C9orf84Q5VXU9 1444 aa16.43■□□□□ 0.22
EDEM3-201ENST00000318130 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
EDEM3-201ENST00000318130 TDO2P48775 406 aa16.43■□□□□ 0.22
EDEM3-201ENST00000318130 STARD3NLO95772 234 aa16.43■□□□□ 0.22
EDEM3-201ENST00000318130 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
EDEM3-201ENST00000318130 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
EDEM3-201ENST00000318130 CCDC192P0DO97 292 aa16.42■□□□□ 0.22
EDEM3-201ENST00000318130 OFD1O75665 1012 aa16.42■□□□□ 0.22
EDEM3-201ENST00000318130 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
EDEM3-201ENST00000318130 RFC4P35249 363 aa16.41■□□□□ 0.22
EDEM3-201ENST00000318130 AACSQ86V21 672 aa16.41■□□□□ 0.22
EDEM3-201ENST00000318130 CCDC69A6NI79 296 aa16.41■□□□□ 0.22
EDEM3-201ENST00000318130 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
EDEM3-201ENST00000318130 EXOC5O00471 708 aa16.41■□□□□ 0.22
EDEM3-201ENST00000318130 PDCP20941 246 aa16.41■□□□□ 0.22
EDEM3-201ENST00000318130 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
EDEM3-201ENST00000318130 FBLN1P23142 703 aa16.41■□□□□ 0.22
EDEM3-201ENST00000318130 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
EDEM3-201ENST00000318130 METTL24Q5JXM2 366 aa16.4■□□□□ 0.22
EDEM3-201ENST00000318130 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
EDEM3-201ENST00000318130 POLR3DP05423 398 aaPredicted RBP16.4■□□□□ 0.22
EDEM3-201ENST00000318130 TMEM87AQ8NBN3 555 aa16.4■□□□□ 0.22
EDEM3-201ENST00000318130 MINDY4BA8MYZ0 360 aa16.4■□□□□ 0.22
EDEM3-201ENST00000318130 NME9Q86XW9 330 aa16.4■□□□□ 0.22
EDEM3-201ENST00000318130 TMOD2Q9NZR1 351 aa16.39■□□□□ 0.21
EDEM3-201ENST00000318130 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
EDEM3-201ENST00000318130 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
EDEM3-201ENST00000318130 SMARCE1Q969G3 411 aa16.39■□□□□ 0.21
EDEM3-201ENST00000318130 TNMDQ9H2S6 317 aa16.39■□□□□ 0.21
EDEM3-201ENST00000318130 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
EDEM3-201ENST00000318130 VTI1AQ96AJ9 217 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
EDEM3-201ENST00000318130 XBP1P17861 261 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.38■□□□□ 0.218e-7■■■■■ 37.5
EDEM3-201ENST00000318130 STK38Q15208 465 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 FILIP1LQ4L180 1135 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 SERPINC1P01008 464 aa16.38■□□□□ 0.21
EDEM3-201ENST00000318130 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
EDEM3-201ENST00000318130 PLCD4Q9BRC7 762 aa16.37■□□□□ 0.21
EDEM3-201ENST00000318130 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
EDEM3-201ENST00000318130 ZSCAN30Q86W11 494 aa16.37■□□□□ 0.21
EDEM3-201ENST00000318130 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
EDEM3-201ENST00000318130 GNAI2P04899 355 aa16.36■□□□□ 0.21
EDEM3-201ENST00000318130 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
EDEM3-201ENST00000318130 GNAI3P08754 354 aa16.36■□□□□ 0.21
EDEM3-201ENST00000318130 ZNF408Q9H9D4 720 aa16.36■□□□□ 0.21
EDEM3-201ENST00000318130 PRDM10Q9NQV6 1147 aa16.36■□□□□ 0.21
EDEM3-201ENST00000318130 TRMT112Q9UI30 125 aaKnown RBP16.36■□□□□ 0.21
EDEM3-201ENST00000318130 KIF21BO75037 1637 aa16.36■□□□□ 0.21
EDEM3-201ENST00000318130 PDCL2Q8N4E4 241 aa16.36■□□□□ 0.21
EDEM3-201ENST00000318130 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
EDEM3-201ENST00000318130 SEPT11Q9NVA2 429 aaKnown RBP16.35■□□□□ 0.21
EDEM3-201ENST00000318130 ZNF652Q9Y2D9 606 aa16.35■□□□□ 0.21
EDEM3-201ENST00000318130 LRRC9Q6ZRR7 1453 aa16.35■□□□□ 0.21
EDEM3-201ENST00000318130 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
EDEM3-201ENST00000318130 DZIP1Q86YF9 867 aaKnown RBP16.35■□□□□ 0.21
EDEM3-201ENST00000318130 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
EDEM3-201ENST00000318130 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
EDEM3-201ENST00000318130 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
EDEM3-201ENST00000318130 CWC27Q6UX04 472 aaKnown RBP16.34■□□□□ 0.21
EDEM3-201ENST00000318130 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
EDEM3-201ENST00000318130 TOM1O60784 492 aa16.33■□□□□ 0.21
EDEM3-201ENST00000318130 KIAA0754O94854 1291 aa16.33■□□□□ 0.21
EDEM3-201ENST00000318130 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 LMTK3Q96Q04 1460 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 CCDC96Q2M329 555 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 CYP46A1Q9Y6A2 500 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 ATP5J2-PTCD1G3V325 749 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 KRT85P78386 507 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 EPRSP07814 1512 aaKnown RBP16.33■□□□□ 0.2
EDEM3-201ENST00000318130 MYO6Q9UM54 1294 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
EDEM3-201ENST00000318130 DHX8Q14562 1220 aaKnown RBP16.32■□□□□ 0.2
EDEM3-201ENST00000318130 SYCE3A1L190 88 aa16.32■□□□□ 0.2
EDEM3-201ENST00000318130 SRGAP3O43295 1099 aa16.32■□□□□ 0.2
EDEM3-201ENST00000318130 ERLIN1O75477 346 aa16.32■□□□□ 0.2
EDEM3-201ENST00000318130 ME1P48163 572 aa16.32■□□□□ 0.2
EDEM3-201ENST00000318130 MAGEC2Q9UBF1 373 aaPredicted RBP16.32■□□□□ 0.2
EDEM3-201ENST00000318130 JAG2Q9Y219 1238 aa16.32■□□□□ 0.2
EDEM3-201ENST00000318130 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
EDEM3-201ENST00000318130 CBX1P83916 185 aa16.31■□□□□ 0.2
EDEM3-201ENST00000318130 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
EDEM3-201ENST00000318130 PDCL3Q9H2J4 239 aa16.31■□□□□ 0.2
EDEM3-201ENST00000318130 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
EDEM3-201ENST00000318130 CHD1LQ86WJ1 897 aa16.31■□□□□ 0.2
EDEM3-201ENST00000318130 FILIP1Q7Z7B0 1213 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms