RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 FKBP15Q5T1M5 1219 aa15.36■□□□□ 0.05
AFF3-201ENST00000317233 FIBPO43427 364 aa15.36■□□□□ 0.05
AFF3-201ENST00000317233 SNX16P57768 344 aa15.36■□□□□ 0.05
AFF3-201ENST00000317233 BBXQ8WY36 941 aaPredicted RBP15.36■□□□□ 0.05
AFF3-201ENST00000317233 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
AFF3-201ENST00000317233 FBF1Q8TES7 1133 aa15.35■□□□□ 0.05
AFF3-201ENST00000317233 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
AFF3-201ENST00000317233 TDO2P48775 406 aa15.35■□□□□ 0.05
AFF3-201ENST00000317233 C22orf23Q9BZE7 217 aa15.35■□□□□ 0.05
AFF3-201ENST00000317233 DDX12PQ92771 950 aa15.35■□□□□ 0.05
AFF3-201ENST00000317233 SMTNL1A8MU46 457 aa15.34■□□□□ 0.05
AFF3-201ENST00000317233 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
AFF3-201ENST00000317233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.34■□□□□ 0.05
AFF3-201ENST00000317233 KIF3CO14782 793 aa15.34■□□□□ 0.05
AFF3-201ENST00000317233 UQCRHP07919 91 aa15.34■□□□□ 0.05
AFF3-201ENST00000317233 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
AFF3-201ENST00000317233 LNPKQ9C0E8 428 aa15.34■□□□□ 0.05
AFF3-201ENST00000317233 EEA1Q15075 1411 aa15.34■□□□□ 0.05
AFF3-201ENST00000317233 CCDC14Q49A88 953 aa15.34■□□□□ 0.05
AFF3-201ENST00000317233 EHMT1Q9H9B1 1298 aa15.33■□□□□ 0.05
AFF3-201ENST00000317233 KIF5CO60282 957 aa15.33■□□□□ 0.04
AFF3-201ENST00000317233 GMNNO75496 209 aa15.33■□□□□ 0.04
AFF3-201ENST00000317233 MXRA7P84157 204 aa15.33■□□□□ 0.04
AFF3-201ENST00000317233 MPHOSPH6Q99547 160 aaKnown RBP15.33■□□□□ 0.04
AFF3-201ENST00000317233 ANKRD30AQ9BXX3 1397 aa15.33■□□□□ 0.04
AFF3-201ENST00000317233 A0A1W2PRG0 241 aa15.33■□□□□ 0.04
AFF3-201ENST00000317233 DZIP1Q86YF9 867 aaKnown RBP15.33■□□□□ 0.04
AFF3-201ENST00000317233 AEBP1Q8IUX7 1158 aa15.33■□□□□ 0.04
AFF3-201ENST00000317233 UTP14AQ9BVJ6 771 aaKnown RBP15.33■□□□□ 0.04
AFF3-201ENST00000317233 SMG6Q86US8 1419 aaKnown RBP15.32■□□□□ 0.04
AFF3-201ENST00000317233 RFX1P22670 979 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 RAB34Q9BZG1 259 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 PAFAH1B1P43034 410 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 RBM25P49756 843 aaKnown RBP15.32■□□□□ 0.04
AFF3-201ENST00000317233 FAM114A1Q8IWE2 563 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 CCDC89Q8N998 374 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 WASF1Q92558 559 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 CUL5Q93034 780 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 NAA15Q9BXJ9 866 aaKnown RBP15.32■□□□□ 0.04
AFF3-201ENST00000317233 UBXN4Q92575 508 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 KIF5AQ12840 1032 aa15.32■□□□□ 0.04
AFF3-201ENST00000317233 IQCGQ9H095 443 aaKnown RBP15.32■□□□□ 0.04
AFF3-201ENST00000317233 DYNC1I1O14576 645 aa15.31■□□□□ 0.04
AFF3-201ENST00000317233 CDC45O75419 566 aa15.31■□□□□ 0.04
AFF3-201ENST00000317233 CASQ1P31415 396 aa15.31■□□□□ 0.04
AFF3-201ENST00000317233 TNNT1P13805 278 aa15.31■□□□□ 0.04
AFF3-201ENST00000317233 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
AFF3-201ENST00000317233 SYNCQ9H7C4 482 aa15.31■□□□□ 0.04
AFF3-201ENST00000317233 CRACR2BQ8N4Y2 399 aaPredicted RBP15.31■□□□□ 0.04
AFF3-201ENST00000317233 KRT85P78386 507 aa15.31■□□□□ 0.04
AFF3-201ENST00000317233 PUF60Q9UHX1 559 aaKnown RBP15.31■□□□□ 0.04
AFF3-201ENST00000317233 HLTFQ14527 1009 aaKnown RBP eCLIP15.31■□□□□ 0.04
AFF3-201ENST00000317233 RPUSD2Q8IZ73 545 aaKnown RBP15.31■□□□□ 0.04
AFF3-201ENST00000317233 OPA1O60313 960 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 CCDC30Q5VVM6 783 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 POLR3GO15318 223 aaPredicted RBP15.3■□□□□ 0.04
AFF3-201ENST00000317233 ALS2CR12Q96Q35 445 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
AFF3-201ENST00000317233 IPO4Q8TEX9 1081 aaKnown RBP15.3■□□□□ 0.04
AFF3-201ENST00000317233 FEZ2Q9UHY8 353 aaPredicted RBP15.3■□□□□ 0.04
AFF3-201ENST00000317233 GNAI1P63096 354 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 VTI1AQ96AJ9 217 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 RBM10P98175 930 aaKnown RBP15.3■□□□□ 0.04
AFF3-201ENST00000317233 STK3Q13188 491 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 RAI14Q9P0K7 980 aa15.3■□□□□ 0.04
AFF3-201ENST00000317233 TTC21AQ8NDW8 1320 aa15.29■□□□□ 0.04
AFF3-201ENST00000317233 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
AFF3-201ENST00000317233 NEK4P51957 841 aa15.29■□□□□ 0.04
AFF3-201ENST00000317233 BIRC2Q13490 618 aa15.29■□□□□ 0.04
AFF3-201ENST00000317233 GPATCH11Q8N954 259 aa15.29■□□□□ 0.04
AFF3-201ENST00000317233 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
AFF3-201ENST00000317233 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
AFF3-201ENST00000317233 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
AFF3-201ENST00000317233 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
AFF3-201ENST00000317233 NOC2LQ9Y3T9 749 aaKnown RBP15.29■□□□□ 0.04
AFF3-201ENST00000317233 ZBTB16Q05516 673 aa15.28■□□□□ 0.04
AFF3-201ENST00000317233 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
AFF3-201ENST00000317233 MINK1Q8N4C8 1332 aaPredicted RBP15.28■□□□□ 0.04
AFF3-201ENST00000317233 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
AFF3-201ENST00000317233 GOLGA6L9A6NEM1 432 aa15.28■□□□□ 0.04
AFF3-201ENST00000317233 PRPF40AO75400 957 aaKnown RBP15.28■□□□□ 0.04
AFF3-201ENST00000317233 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
AFF3-201ENST00000317233 RSPH3Q86UC2 560 aa15.28■□□□□ 0.04
AFF3-201ENST00000317233 LIG1P18858 919 aa15.27■□□□□ 0.04
AFF3-201ENST00000317233 PRPF4BQ13523 1007 aaKnown RBP15.27■□□□□ 0.04
AFF3-201ENST00000317233 EPSTI1Q96J88 318 aa15.27■□□□□ 0.04
AFF3-201ENST00000317233 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
AFF3-201ENST00000317233 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.04
AFF3-201ENST00000317233 CCDC82Q8N4S0 544 aa15.27■□□□□ 0.04
AFF3-201ENST00000317233 CLGNO14967 610 aa15.27■□□□□ 0.04
AFF3-201ENST00000317233 PLVAPQ9BX97 442 aa15.27■□□□□ 0.03
AFF3-201ENST00000317233 PODXL2Q9NZ53 605 aa15.27■□□□□ 0.03
AFF3-201ENST00000317233 CCDC117Q8IWD4 279 aaPredicted RBP15.27■□□□□ 0.03
AFF3-201ENST00000317233 WDR63Q8IWG1 891 aa15.27■□□□□ 0.03
AFF3-201ENST00000317233 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.03
AFF3-201ENST00000317233 GNAI3P08754 354 aa15.27■□□□□ 0.03
AFF3-201ENST00000317233 DNA2P51530 1060 aa15.26■□□□□ 0.03
AFF3-201ENST00000317233 TMEM266Q2M3C6 531 aa15.26■□□□□ 0.03
AFF3-201ENST00000317233 CCDC144CPQ8IYA2 1237 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms