RNA–Protein interactions for RNA: ENST00000316436.3

LSMEM2-201, Transcript of leucine rich single-pass membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM2, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2-201ENST00000316436 ATRNO75882 1429 aa20.98■□□□□ 0.95
LSMEM2-201ENST00000316436 NFE2L2Q16236 605 aa20.97■□□□□ 0.95
LSMEM2-201ENST00000316436 MTHFSDQ2M296 383 aaKnown RBP20.97■□□□□ 0.95
LSMEM2-201ENST00000316436 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
LSMEM2-201ENST00000316436 ZNF521Q96K83 1311 aa20.97■□□□□ 0.95
LSMEM2-201ENST00000316436 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
LSMEM2-201ENST00000316436 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
LSMEM2-201ENST00000316436 VPS72Q15906 364 aa20.95■□□□□ 0.94
LSMEM2-201ENST00000316436 USP35Q9P2H5 1018 aa20.95■□□□□ 0.94
LSMEM2-201ENST00000316436 USP21Q9UK80 565 aa20.95■□□□□ 0.94
LSMEM2-201ENST00000316436 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
LSMEM2-201ENST00000316436 TRIM35Q9UPQ4 493 aa20.94■□□□□ 0.94
LSMEM2-201ENST00000316436 RAPGEF4Q8WZA2 1011 aa20.94■□□□□ 0.94
LSMEM2-201ENST00000316436 IL2RBP14784 551 aa20.92■□□□□ 0.94
LSMEM2-201ENST00000316436 TATP17735 454 aaPredicted RBP20.92■□□□□ 0.94
LSMEM2-201ENST00000316436 NEFMP07197 916 aa20.91■□□□□ 0.94
LSMEM2-201ENST00000316436 RIPK4P57078 832 aa20.91■□□□□ 0.94
LSMEM2-201ENST00000316436 CCDC27Q2M243 656 aa20.91■□□□□ 0.94
LSMEM2-201ENST00000316436 NCBP3Q53F19 620 aaKnown RBP20.91■□□□□ 0.94
LSMEM2-201ENST00000316436 TNS2Q63HR2 1409 aa20.91■□□□□ 0.94
LSMEM2-201ENST00000316436 MAP3K5Q99683 1374 aa20.9■□□□□ 0.94
LSMEM2-201ENST00000316436 WWC1Q8IX03 1113 aa20.9■□□□□ 0.94
LSMEM2-201ENST00000316436 GAS2L2Q8NHY3 880 aa20.9■□□□□ 0.94
LSMEM2-201ENST00000316436 SCN11AQ9UI33 1791 aa20.9■□□□□ 0.94
LSMEM2-201ENST00000316436 TOGARAM1Q9Y4F4 1720 aa20.89■□□□□ 0.94
LSMEM2-201ENST00000316436 AMOTQ4VCS5 1084 aa20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 PLEKHO1Q53GL0 409 aaPredicted RBP20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 ZNF530Q6P9A1 599 aaPredicted RBP20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 NGEFQ8N5V2 710 aa20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 THRAP3Q9Y2W1 955 aaKnown RBP20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 SIPA1L3O60292 1781 aaPredicted RBP20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 THUMPD2Q9BTF0 503 aaKnown RBP20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
LSMEM2-201ENST00000316436 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
LSMEM2-201ENST00000316436 BARGINQ6ZT62 677 aa20.87■□□□□ 0.93
LSMEM2-201ENST00000316436 CYP27B1O15528 508 aa20.86■□□□□ 0.93
LSMEM2-201ENST00000316436 DCTN1Q14203 1278 aa20.86■□□□□ 0.93
LSMEM2-201ENST00000316436 ILDR2Q71H61 639 aa20.85■□□□□ 0.93
LSMEM2-201ENST00000316436 SPINK5Q9NQ38 1064 aaPredicted RBP20.85■□□□□ 0.93
LSMEM2-201ENST00000316436 PHKG2P15735 406 aa20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 MCM10Q7L590 875 aa20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 TRPC5Q9UL62 973 aaPredicted RBP20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 SPG7Q9UQ90 795 aa20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 MRC1P22897 1456 aa20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
LSMEM2-201ENST00000316436 GNAT3A8MTJ3 354 aa20.83■□□□□ 0.93
LSMEM2-201ENST00000316436 FAM98CQ17RN3 349 aaKnown RBP20.83■□□□□ 0.93
LSMEM2-201ENST00000316436 AKAP4Q5JQC9 854 aa20.83■□□□□ 0.93
LSMEM2-201ENST00000316436 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.93
LSMEM2-201ENST00000316436 CEMIPQ8WUJ3 1361 aa20.83■□□□□ 0.93
LSMEM2-201ENST00000316436 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
LSMEM2-201ENST00000316436 IL17REQ8NFR9 667 aa20.81■□□□□ 0.92
LSMEM2-201ENST00000316436 CDCA7Q9BWT1 371 aaPredicted RBP20.81■□□□□ 0.92
LSMEM2-201ENST00000316436 RGS17Q9UGC6 210 aaPredicted RBP20.81■□□□□ 0.92
LSMEM2-201ENST00000316436 DOT1LQ8TEK3 1739 aa20.81■□□□□ 0.92
LSMEM2-201ENST00000316436 KDM3BQ7LBC6 1761 aa20.81■□□□□ 0.92
LSMEM2-201ENST00000316436 BRWD3Q6RI45 1802 aa20.8■□□□□ 0.92
LSMEM2-201ENST00000316436 HTATSF1O43719 755 aaKnown RBP20.8■□□□□ 0.92
LSMEM2-201ENST00000316436 C1orf141Q5JVX7 400 aa20.8■□□□□ 0.92
LSMEM2-201ENST00000316436 WDR63Q8IWG1 891 aa20.8■□□□□ 0.92
LSMEM2-201ENST00000316436 QTRT2Q9H974 415 aaKnown RBP20.8■□□□□ 0.92
LSMEM2-201ENST00000316436 LGR6Q9HBX8 967 aa20.8■□□□□ 0.92
LSMEM2-201ENST00000316436 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
LSMEM2-201ENST00000316436 MPRIPQ6WCQ1 1025 aa20.79■□□□□ 0.92
LSMEM2-201ENST00000316436 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
LSMEM2-201ENST00000316436 IL16Q14005 1332 aa20.78■□□□□ 0.92
LSMEM2-201ENST00000316436 RNMTO43148 476 aaKnown RBP20.77■□□□□ 0.92
LSMEM2-201ENST00000316436 SLFN5Q08AF3 891 aa20.77■□□□□ 0.92
LSMEM2-201ENST00000316436 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
LSMEM2-201ENST00000316436 ZNF772Q68DY9 489 aaPredicted RBP20.77■□□□□ 0.92
LSMEM2-201ENST00000316436 TRMT2AQ8IZ69 625 aaKnown RBP20.77■□□□□ 0.92
LSMEM2-201ENST00000316436 ITGB4P16144 1822 aa20.77■□□□□ 0.92
LSMEM2-201ENST00000316436 PAPPAQ13219 1627 aa20.77■□□□□ 0.92
LSMEM2-201ENST00000316436 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
LSMEM2-201ENST00000316436 ZNF853P0CG23 659 aa20.76■□□□□ 0.91
LSMEM2-201ENST00000316436 DDB1Q16531 1140 aa20.76■□□□□ 0.91
LSMEM2-201ENST00000316436 DDX54Q8TDD1 881 aaKnown RBP20.76■□□□□ 0.91
LSMEM2-201ENST00000316436 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
LSMEM2-201ENST00000316436 NKX1-1Q15270 411 aaPredicted RBP20.75■□□□□ 0.91
LSMEM2-201ENST00000316436 EXOC5O00471 708 aa20.75■□□□□ 0.91
LSMEM2-201ENST00000316436 DUSP27Q5VZP5 1158 aa20.75■□□□□ 0.91
LSMEM2-201ENST00000316436 E9PSI1 815 aa20.74■□□□□ 0.91
LSMEM2-201ENST00000316436 MARCH10Q8NA82 808 aaPredicted RBP20.74■□□□□ 0.91
LSMEM2-201ENST00000316436 FANCIQ9NVI1 1328 aa20.74■□□□□ 0.91
LSMEM2-201ENST00000316436 POTEAQ6S8J7 498 aa20.73■□□□□ 0.91
LSMEM2-201ENST00000316436 TSR2Q969E8 191 aaKnown RBP20.73■□□□□ 0.91
LSMEM2-201ENST00000316436 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
LSMEM2-201ENST00000316436 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
LSMEM2-201ENST00000316436 RGS12O14924 1447 aa20.71■□□□□ 0.91
LSMEM2-201ENST00000316436 CALD1Q05682 793 aaKnown RBP20.71■□□□□ 0.91
LSMEM2-201ENST00000316436 UBR2Q8IWV8 1755 aa20.71■□□□□ 0.91
LSMEM2-201ENST00000316436 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
LSMEM2-201ENST00000316436 RBM6P78332 1123 aaKnown RBP20.7■□□□□ 0.9
LSMEM2-201ENST00000316436 SEPT12Q8IYM1 358 aa20.7■□□□□ 0.9
LSMEM2-201ENST00000316436 CFAP44Q96MT7 982 aa20.7■□□□□ 0.9
LSMEM2-201ENST00000316436 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms