RNA–Protein interactions for RNA: ENST00000314088.6

HIST1H2AC-201, Transcript of histone cluster 1 H2A family member c, humanhuman

TSL 1 (best)

Gene HIST1H2AC, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AC-201ENST00000314088 NUTM2AQ8IVF1 878 aaPredicted RBP22.2■■□□□ 1.14
HIST1H2AC-201ENST00000314088 KIF16BQ96L93 1317 aa22.19■■□□□ 1.14
HIST1H2AC-201ENST00000314088 ZC3H6P61129 1189 aaKnown RBP22.19■■□□□ 1.14
HIST1H2AC-201ENST00000314088 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
HIST1H2AC-201ENST00000314088 LMOD3Q0VAK6 560 aa22.19■■□□□ 1.14
HIST1H2AC-201ENST00000314088 KIAA0232Q92628 1395 aa22.18■■□□□ 1.14
HIST1H2AC-201ENST00000314088 RRS1Q15050 365 aaKnown RBP22.18■■□□□ 1.14
HIST1H2AC-201ENST00000314088 ZNF772Q68DY9 489 aaPredicted RBP22.18■■□□□ 1.14
HIST1H2AC-201ENST00000314088 ARHGEF25Q86VW2 580 aa22.18■■□□□ 1.14
HIST1H2AC-201ENST00000314088 MAP3K19Q56UN5 1328 aa22.18■■□□□ 1.14
HIST1H2AC-201ENST00000314088 RLBP1P12271 317 aa22.17■■□□□ 1.14
HIST1H2AC-201ENST00000314088 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
HIST1H2AC-201ENST00000314088 SMC4Q9NTJ3 1288 aa22.17■■□□□ 1.14
HIST1H2AC-201ENST00000314088 DDX19BQ9UMR2 479 aa22.17■■□□□ 1.14
HIST1H2AC-201ENST00000314088 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
HIST1H2AC-201ENST00000314088 PRDM11Q9NQV5 511 aa22.16■■□□□ 1.14
HIST1H2AC-201ENST00000314088 ABCC6O95255 1503 aa22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 ADAMTS2O95450 1211 aa22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 MEX3CQ5U5Q3 659 aaKnown RBP22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 ATF7IPQ6VMQ6 1270 aa22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 TSR2Q969E8 191 aaKnown RBP22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 KIF24Q5T7B8 1368 aa22.15■■□□□ 1.14
HIST1H2AC-201ENST00000314088 PEAK1Q9H792 1746 aa22.14■■□□□ 1.14
HIST1H2AC-201ENST00000314088 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.14
HIST1H2AC-201ENST00000314088 CHMP4BQ9H444 224 aaKnown RBP22.14■■□□□ 1.14
HIST1H2AC-201ENST00000314088 IFT57Q9NWB7 429 aa22.14■■□□□ 1.14
HIST1H2AC-201ENST00000314088 SSH1Q8WYL5 1049 aa22.14■■□□□ 1.13
HIST1H2AC-201ENST00000314088 COL14A1Q05707 1796 aaKnown RBP22.13■■□□□ 1.13
HIST1H2AC-201ENST00000314088 AMPHP49418 695 aa22.13■■□□□ 1.13
HIST1H2AC-201ENST00000314088 GNAI1P63096 354 aa22.13■■□□□ 1.13
HIST1H2AC-201ENST00000314088 HDAC1Q13547 482 aaPredicted RBP22.13■■□□□ 1.13
HIST1H2AC-201ENST00000314088 VIRMAQ69YN4 1812 aaKnown RBP22.13■■□□□ 1.13
HIST1H2AC-201ENST00000314088 ARHGAP45Q92619 1136 aa22.13■■□□□ 1.13
HIST1H2AC-201ENST00000314088 UPF1Q92900 1129 aaKnown RBP eCLIP22.13■■□□□ 1.133e-14■■□□□ 13.1
HIST1H2AC-201ENST00000314088 PCDHB15Q9Y5E8 787 aa22.13■■□□□ 1.13
HIST1H2AC-201ENST00000314088 COL18A1P39060 1754 aa22.12■■□□□ 1.13
HIST1H2AC-201ENST00000314088 FLT4P35916 1363 aa22.12■■□□□ 1.13
HIST1H2AC-201ENST00000314088 PPM1GO15355 546 aaPredicted RBP22.12■■□□□ 1.13
HIST1H2AC-201ENST00000314088 NPM2Q86SE8 214 aaKnown RBP22.12■■□□□ 1.13
HIST1H2AC-201ENST00000314088 LMO7Q8WWI1 1683 aa22.12■■□□□ 1.13
HIST1H2AC-201ENST00000314088 ZNF853P0CG23 659 aa22.11■■□□□ 1.13
HIST1H2AC-201ENST00000314088 CHRNA2Q15822 529 aa22.11■■□□□ 1.13
HIST1H2AC-201ENST00000314088 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
HIST1H2AC-201ENST00000314088 TRIM27P14373 513 aa22.11■■□□□ 1.13
HIST1H2AC-201ENST00000314088 RGS3P49796 1198 aa22.11■■□□□ 1.13
HIST1H2AC-201ENST00000314088 SKAP1Q86WV1 359 aa22.11■■□□□ 1.13
HIST1H2AC-201ENST00000314088 BCL2L13Q9BXK5 485 aa22.11■■□□□ 1.13
HIST1H2AC-201ENST00000314088 HOXC9P31274 260 aa22.1■■□□□ 1.13
HIST1H2AC-201ENST00000314088 IP6K1Q92551 441 aa22.1■■□□□ 1.13
HIST1H2AC-201ENST00000314088 PLCH1Q4KWH8 1693 aa22.09■■□□□ 1.13
HIST1H2AC-201ENST00000314088 USP35Q9P2H5 1018 aa22.08■■□□□ 1.13
HIST1H2AC-201ENST00000314088 RXRBP28702 533 aa22.07■■□□□ 1.12
HIST1H2AC-201ENST00000314088 PHACTR3Q96KR7 559 aa22.07■■□□□ 1.12
HIST1H2AC-201ENST00000314088 C8orf37Q96NL8 207 aa22.07■■□□□ 1.12
HIST1H2AC-201ENST00000314088 CAMTA1Q9Y6Y1 1673 aa22.06■■□□□ 1.12
HIST1H2AC-201ENST00000314088 RGPD5Q99666 1765 aa22.06■■□□□ 1.12
HIST1H2AC-201ENST00000314088 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
HIST1H2AC-201ENST00000314088 CFAP44Q96MT7 982 aa22.06■■□□□ 1.12
HIST1H2AC-201ENST00000314088 NOB1Q9ULX3 412 aaKnown RBP22.06■■□□□ 1.12
HIST1H2AC-201ENST00000314088 AXIN2Q9Y2T1 843 aa22.06■■□□□ 1.12
HIST1H2AC-201ENST00000314088 NWD2Q9ULI1 1742 aa22.05■■□□□ 1.12
HIST1H2AC-201ENST00000314088 SLIT2O94813 1529 aa22.05■■□□□ 1.12
HIST1H2AC-201ENST00000314088 NGLY1Q96IV0 654 aa22.04■■□□□ 1.12
HIST1H2AC-201ENST00000314088 TNNQ9UQP3 1299 aa22.04■■□□□ 1.12
HIST1H2AC-201ENST00000314088 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
HIST1H2AC-201ENST00000314088 COL5A2P05997 1499 aaPredicted RBP22.04■■□□□ 1.12
HIST1H2AC-201ENST00000314088 AFF2P51816 1311 aa22.03■■□□□ 1.12
HIST1H2AC-201ENST00000314088 VAMP4O75379 141 aa22.03■■□□□ 1.12
HIST1H2AC-201ENST00000314088 HMOX1P09601 288 aa22.03■■□□□ 1.12
HIST1H2AC-201ENST00000314088 ZBTB40Q9NUA8 1239 aa22.03■■□□□ 1.12
HIST1H2AC-201ENST00000314088 PDZRN3Q9UPQ7 1066 aa22.02■■□□□ 1.12
HIST1H2AC-201ENST00000314088 NRAPQ86VF7 1730 aa22.02■■□□□ 1.12
HIST1H2AC-201ENST00000314088 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
HIST1H2AC-201ENST00000314088 ERBB3P21860 1342 aa22.01■■□□□ 1.11
HIST1H2AC-201ENST00000314088 SMC5Q8IY18 1101 aa22.01■■□□□ 1.11
HIST1H2AC-201ENST00000314088 ANKRD24Q8TF21 1146 aa22.01■■□□□ 1.11
HIST1H2AC-201ENST00000314088 RGPD1P0DJD0 1748 aa22■■□□□ 1.11
HIST1H2AC-201ENST00000314088 ITPRIPQ8IWB1 547 aa22■■□□□ 1.11
HIST1H2AC-201ENST00000314088 EIF4A2Q14240 407 aaKnown RBP21.99■■□□□ 1.11
HIST1H2AC-201ENST00000314088 MRPL50Q8N5N7 158 aaKnown RBP21.99■■□□□ 1.11
HIST1H2AC-201ENST00000314088 LTV1Q96GA3 475 aaPredicted RBP21.99■■□□□ 1.11
HIST1H2AC-201ENST00000314088 FAM208AQ9UK61 1670 aaKnown RBP21.99■■□□□ 1.11
HIST1H2AC-201ENST00000314088 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.99■■□□□ 1.11
HIST1H2AC-201ENST00000314088 TMEM57Q8N5G2 664 aa21.98■■□□□ 1.11
HIST1H2AC-201ENST00000314088 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
HIST1H2AC-201ENST00000314088 BCL9LQ86UU0 1499 aa21.98■■□□□ 1.11
HIST1H2AC-201ENST00000314088 DLG5Q8TDM6 1919 aa21.98■■□□□ 1.11
HIST1H2AC-201ENST00000314088 EVA1CP58658 441 aa21.98■■□□□ 1.11
HIST1H2AC-201ENST00000314088 STRN4Q9NRL3 753 aa21.98■■□□□ 1.11
HIST1H2AC-201ENST00000314088 MBIPQ9NS73 344 aa21.98■■□□□ 1.11
HIST1H2AC-201ENST00000314088 WDR17Q8IZU2 1322 aa21.97■■□□□ 1.11
HIST1H2AC-201ENST00000314088 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
HIST1H2AC-201ENST00000314088 UNC5CLQ8IV45 518 aa21.97■■□□□ 1.11
HIST1H2AC-201ENST00000314088 CSB-PGBD3P0DP91 1061 aa21.96■■□□□ 1.11
HIST1H2AC-201ENST00000314088 USP21Q9UK80 565 aa21.96■■□□□ 1.11
HIST1H2AC-201ENST00000314088 RGS12O14924 1447 aa21.96■■□□□ 1.11
HIST1H2AC-201ENST00000314088 API5Q9BZZ5 524 aaKnown RBP21.95■■□□□ 1.1
HIST1H2AC-201ENST00000314088 UPF2Q9HAU5 1272 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms