RNA–Protein interactions for RNA: ENST00000314067.10

IFT43-202, Transcript of intraflagellar transport 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IFT43, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-202ENST00000314067 ARXQ96QS3 562 aa16.19■□□□□ 0.18
IFT43-202ENST00000314067 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
IFT43-202ENST00000314067 KCNQ4P56696 695 aa16.17■□□□□ 0.18
IFT43-202ENST00000314067 ITGB4P16144 1822 aa16.17■□□□□ 0.18
IFT43-202ENST00000314067 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
IFT43-202ENST00000314067 TAF1LQ8IZX4 1826 aa16.16■□□□□ 0.18
IFT43-202ENST00000314067 MEGF6O75095 1541 aa16.15■□□□□ 0.18
IFT43-202ENST00000314067 MAP2P11137 1827 aaKnown RBP16.15■□□□□ 0.18
IFT43-202ENST00000314067 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
IFT43-202ENST00000314067 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
IFT43-202ENST00000314067 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
IFT43-202ENST00000314067 SLC27A3Q5K4L6 730 aa16.15■□□□□ 0.18
IFT43-202ENST00000314067 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
IFT43-202ENST00000314067 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
IFT43-202ENST00000314067 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
IFT43-202ENST00000314067 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
IFT43-202ENST00000314067 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
IFT43-202ENST00000314067 TFCP2L1Q9NZI6 479 aa16.14■□□□□ 0.17
IFT43-202ENST00000314067 C5P01031 1676 aa16.14■□□□□ 0.17
IFT43-202ENST00000314067 NSD2O96028 1365 aa16.13■□□□□ 0.17
IFT43-202ENST00000314067 FYB1O15117 783 aa16.12■□□□□ 0.17
IFT43-202ENST00000314067 POLD1P28340 1107 aa16.12■□□□□ 0.17
IFT43-202ENST00000314067 TMF1P82094 1093 aa16.12■□□□□ 0.17
IFT43-202ENST00000314067 NBPF6Q5VWK0 638 aa16.12■□□□□ 0.17
IFT43-202ENST00000314067 NBPF4Q96M43 638 aa16.12■□□□□ 0.17
IFT43-202ENST00000314067 PNPLA7Q6ZV29 1317 aa16.12■□□□□ 0.17
IFT43-202ENST00000314067 GPR162Q16538 588 aa16.11■□□□□ 0.17
IFT43-202ENST00000314067 RTL1A6NKG5 1358 aa16.11■□□□□ 0.17
IFT43-202ENST00000314067 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
IFT43-202ENST00000314067 MSH5O43196 834 aa16.1■□□□□ 0.17
IFT43-202ENST00000314067 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
IFT43-202ENST00000314067 RAPGEF4Q8WZA2 1011 aa16.1■□□□□ 0.17
IFT43-202ENST00000314067 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
IFT43-202ENST00000314067 USP47Q96K76 1375 aa16.1■□□□□ 0.17
IFT43-202ENST00000314067 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
IFT43-202ENST00000314067 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.17
IFT43-202ENST00000314067 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
IFT43-202ENST00000314067 HSP90AB2PQ58FF8 381 aa16.07■□□□□ 0.16
IFT43-202ENST00000314067 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
IFT43-202ENST00000314067 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
IFT43-202ENST00000314067 INSRP06213 1382 aa16.05■□□□□ 0.16
IFT43-202ENST00000314067 FLT4P35916 1363 aa16.04■□□□□ 0.16
IFT43-202ENST00000314067 UBR3Q6ZT12 1888 aa16.04■□□□□ 0.16
IFT43-202ENST00000314067 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
IFT43-202ENST00000314067 CDCA8Q53HL2 280 aa16.04■□□□□ 0.16
IFT43-202ENST00000314067 MPRIPQ6WCQ1 1025 aa16.04■□□□□ 0.16
IFT43-202ENST00000314067 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
IFT43-202ENST00000314067 NLGN2Q8NFZ4 835 aa16.04■□□□□ 0.16
IFT43-202ENST00000314067 ANKRD26Q9UPS8 1709 aa16.04■□□□□ 0.16
IFT43-202ENST00000314067 C4BP0C0L5 1744 aa16.03■□□□□ 0.16
IFT43-202ENST00000314067 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
IFT43-202ENST00000314067 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
IFT43-202ENST00000314067 PPM1GO15355 546 aaPredicted RBP16.03■□□□□ 0.16
IFT43-202ENST00000314067 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
IFT43-202ENST00000314067 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.15
IFT43-202ENST00000314067 YBX3P16989 372 aaKnown RBP eCLIP16.01■□□□□ 0.15
IFT43-202ENST00000314067 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
IFT43-202ENST00000314067 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
IFT43-202ENST00000314067 EMILIN1Q9Y6C2 1016 aa16.01■□□□□ 0.15
IFT43-202ENST00000314067 CYP27B1O15528 508 aa16■□□□□ 0.15
IFT43-202ENST00000314067 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
IFT43-202ENST00000314067 PALLDQ8WX93 1383 aa16■□□□□ 0.15
IFT43-202ENST00000314067 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
IFT43-202ENST00000314067 ADCY9O60503 1353 aa15.98■□□□□ 0.15
IFT43-202ENST00000314067 GRIN3BO60391 1043 aa15.97■□□□□ 0.15
IFT43-202ENST00000314067 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
IFT43-202ENST00000314067 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
IFT43-202ENST00000314067 FLAD1Q8NFF5 587 aa15.96■□□□□ 0.15
IFT43-202ENST00000314067 SMARCC1Q92922 1105 aaPredicted RBP15.96■□□□□ 0.15
IFT43-202ENST00000314067 AK7Q96M32 723 aa15.96■□□□□ 0.15
IFT43-202ENST00000314067 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
IFT43-202ENST00000314067 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
IFT43-202ENST00000314067 PIGBQ92521 554 aa15.95■□□□□ 0.14
IFT43-202ENST00000314067 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
IFT43-202ENST00000314067 PHF14O94880 888 aa15.94■□□□□ 0.14
IFT43-202ENST00000314067 SMIM5Q71RC9 77 aa15.94■□□□□ 0.14
IFT43-202ENST00000314067 NCAPD2Q15021 1401 aa15.94■□□□□ 0.14
IFT43-202ENST00000314067 TNNT2P45379 298 aaPredicted RBP15.93■□□□□ 0.14
IFT43-202ENST00000314067 EYA1Q99502 592 aa15.93■□□□□ 0.14
IFT43-202ENST00000314067 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
IFT43-202ENST00000314067 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
IFT43-202ENST00000314067 AMIGO3Q86WK7 504 aa15.92■□□□□ 0.14
IFT43-202ENST00000314067 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
IFT43-202ENST00000314067 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
IFT43-202ENST00000314067 N4BP2Q86UW6 1770 aaPredicted RBP15.91■□□□□ 0.14
IFT43-202ENST00000314067 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
IFT43-202ENST00000314067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.9■□□□□ 0.14
IFT43-202ENST00000314067 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
IFT43-202ENST00000314067 SIK1P57059 783 aa15.9■□□□□ 0.14
IFT43-202ENST00000314067 LINC00116Q8NCU8 138 aa15.9■□□□□ 0.14
IFT43-202ENST00000314067 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
IFT43-202ENST00000314067 POLKQ9UBT6 870 aa15.9■□□□□ 0.14
IFT43-202ENST00000314067 WWC3Q9ULE0 1092 aa15.9■□□□□ 0.14
IFT43-202ENST00000314067 ASAP1Q9ULH1 1129 aa15.9■□□□□ 0.14
IFT43-202ENST00000314067 IFNL2Q8IZJ0 200 aa15.89■□□□□ 0.13
IFT43-202ENST00000314067 COL5A3P25940 1745 aaPredicted RBP15.88■□□□□ 0.13
IFT43-202ENST00000314067 PHKG2P15735 406 aa15.88■□□□□ 0.13
IFT43-202ENST00000314067 ATP6V1AP38606 617 aa15.88■□□□□ 0.13
IFT43-202ENST00000314067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.88■□□□□ 0.13
IFT43-202ENST00000314067 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms