RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 R3HDM1Q15032 1099 aaKnown RBP20.1■□□□□ 0.81
PPP1CA-201ENST00000312989 ACSBG1Q96GR2 724 aa20.09■□□□□ 0.81
PPP1CA-201ENST00000312989 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
PPP1CA-201ENST00000312989 LRP5O75197 1615 aa20.08■□□□□ 0.81
PPP1CA-201ENST00000312989 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.8
PPP1CA-201ENST00000312989 EYA1Q99502 592 aa20.08■□□□□ 0.8
PPP1CA-201ENST00000312989 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
PPP1CA-201ENST00000312989 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
PPP1CA-201ENST00000312989 ZCRB1Q8TBF4 217 aaKnown RBP20.07■□□□□ 0.8
PPP1CA-201ENST00000312989 DDX54Q8TDD1 881 aaKnown RBP20.07■□□□□ 0.8
PPP1CA-201ENST00000312989 PAPPAQ13219 1627 aa20.05■□□□□ 0.8
PPP1CA-201ENST00000312989 MAP2P11137 1827 aaKnown RBP20.05■□□□□ 0.8
PPP1CA-201ENST00000312989 PKD1L3Q7Z443 1732 aa20.04■□□□□ 0.8
PPP1CA-201ENST00000312989 TXNRD1Q16881 649 aa20.04■□□□□ 0.8
PPP1CA-201ENST00000312989 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
PPP1CA-201ENST00000312989 IGSF1Q8N6C5 1336 aa20.03■□□□□ 0.8
PPP1CA-201ENST00000312989 BTAF1O14981 1849 aa20.03■□□□□ 0.8
PPP1CA-201ENST00000312989 CYP27B1O15528 508 aa20.03■□□□□ 0.8
PPP1CA-201ENST00000312989 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
PPP1CA-201ENST00000312989 DOT1LQ8TEK3 1739 aa20.03■□□□□ 0.8
PPP1CA-201ENST00000312989 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.8
PPP1CA-201ENST00000312989 MORC1Q86VD1 984 aa20.02■□□□□ 0.8
PPP1CA-201ENST00000312989 NPC1L1Q9UHC9 1359 aa20.01■□□□□ 0.79
PPP1CA-201ENST00000312989 PCDH11XQ9BZA7 1347 aa20■□□□□ 0.79
PPP1CA-201ENST00000312989 PCDH11YQ9BZA8 1340 aa20■□□□□ 0.79
PPP1CA-201ENST00000312989 TOGARAM1Q9Y4F4 1720 aa19.99■□□□□ 0.79
PPP1CA-201ENST00000312989 PRIM1P49642 420 aaKnown RBP19.99■□□□□ 0.79
PPP1CA-201ENST00000312989 LRRC4BQ9NT99 713 aa19.99■□□□□ 0.79
PPP1CA-201ENST00000312989 PLEKHG2Q9H7P9 1386 aa19.98■□□□□ 0.79
PPP1CA-201ENST00000312989 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
PPP1CA-201ENST00000312989 NBPF14Q5TI25 921 aa19.97■□□□□ 0.79
PPP1CA-201ENST00000312989 PDGFDQ9GZP0 370 aaPredicted RBP19.97■□□□□ 0.79
PPP1CA-201ENST00000312989 NKX1-1Q15270 411 aaPredicted RBP19.96■□□□□ 0.79
PPP1CA-201ENST00000312989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.96■□□□□ 0.79
PPP1CA-201ENST00000312989 IL13P35225 146 aa19.95■□□□□ 0.79
PPP1CA-201ENST00000312989 KDRP35968 1356 aa19.95■□□□□ 0.78
PPP1CA-201ENST00000312989 AEBP1Q8IUX7 1158 aa19.95■□□□□ 0.78
PPP1CA-201ENST00000312989 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
PPP1CA-201ENST00000312989 ZNF827Q17R98 1081 aa19.94■□□□□ 0.78
PPP1CA-201ENST00000312989 CC2D1BQ5T0F9 858 aaKnown RBP19.94■□□□□ 0.78
PPP1CA-201ENST00000312989 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
PPP1CA-201ENST00000312989 LY75O60449 1722 aa19.92■□□□□ 0.78
PPP1CA-201ENST00000312989 MTHFSP49914 203 aa19.92■□□□□ 0.78
PPP1CA-201ENST00000312989 SYTL4Q96C24 671 aaPredicted RBP19.92■□□□□ 0.78
PPP1CA-201ENST00000312989 PHKG2P15735 406 aa19.91■□□□□ 0.78
PPP1CA-201ENST00000312989 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
PPP1CA-201ENST00000312989 SPG7Q9UQ90 795 aa19.91■□□□□ 0.78
PPP1CA-201ENST00000312989 KCNQ4P56696 695 aa19.9■□□□□ 0.78
PPP1CA-201ENST00000312989 SLC27A3Q5K4L6 730 aa19.89■□□□□ 0.77
PPP1CA-201ENST00000312989 STK32BQ9NY57 414 aa19.88■□□□□ 0.77
PPP1CA-201ENST00000312989 PIGBQ92521 554 aa19.87■□□□□ 0.77
PPP1CA-201ENST00000312989 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
PPP1CA-201ENST00000312989 IFNL2Q8IZJ0 200 aa19.86■□□□□ 0.77
PPP1CA-201ENST00000312989 PALLDQ8WX93 1383 aa19.85■□□□□ 0.77
PPP1CA-201ENST00000312989 PTGER2P43116 358 aa19.85■□□□□ 0.77
PPP1CA-201ENST00000312989 SULT6B1Q6IMI4 303 aa19.85■□□□□ 0.77
PPP1CA-201ENST00000312989 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
PPP1CA-201ENST00000312989 SGIP1Q9BQI5 828 aa19.84■□□□□ 0.77
PPP1CA-201ENST00000312989 ITGB4P16144 1822 aa19.84■□□□□ 0.77
PPP1CA-201ENST00000312989 CCNL1Q9UK58 526 aaPredicted RBP19.83■□□□□ 0.77
PPP1CA-201ENST00000312989 PNPLA7Q6ZV29 1317 aa19.83■□□□□ 0.76
PPP1CA-201ENST00000312989 SPON1Q9HCB6 807 aa19.83■□□□□ 0.76
PPP1CA-201ENST00000312989 ZBTB7AO95365 584 aa19.82■□□□□ 0.76
PPP1CA-201ENST00000312989 QSER1Q2KHR3 1735 aa19.81■□□□□ 0.76
PPP1CA-201ENST00000312989 PLEKHO1Q53GL0 409 aaPredicted RBP19.81■□□□□ 0.76
PPP1CA-201ENST00000312989 TUBGCP6Q96RT7 1819 aa19.8■□□□□ 0.76
PPP1CA-201ENST00000312989 AMOTQ4VCS5 1084 aa19.8■□□□□ 0.76
PPP1CA-201ENST00000312989 ZNF530Q6P9A1 599 aaPredicted RBP19.8■□□□□ 0.76
PPP1CA-201ENST00000312989 DIAPH1O60610 1272 aaKnown RBP19.79■□□□□ 0.76
PPP1CA-201ENST00000312989 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
PPP1CA-201ENST00000312989 ATG3Q9NT62 314 aa19.79■□□□□ 0.76
PPP1CA-201ENST00000312989 ASAP1Q9ULH1 1129 aa19.79■□□□□ 0.76
PPP1CA-201ENST00000312989 AMIGO3Q86WK7 504 aa19.78■□□□□ 0.76
PPP1CA-201ENST00000312989 DCAF5Q96JK2 942 aa19.78■□□□□ 0.76
PPP1CA-201ENST00000312989 MTFR1LQ9H019 292 aa19.78■□□□□ 0.76
PPP1CA-201ENST00000312989 C5P01031 1676 aa19.77■□□□□ 0.76
PPP1CA-201ENST00000312989 ERVV-2B6SEH9 535 aa19.77■□□□□ 0.76
PPP1CA-201ENST00000312989 HMOX1P09601 288 aa19.77■□□□□ 0.76
PPP1CA-201ENST00000312989 PPP2R1AP30153 589 aa19.77■□□□□ 0.76
PPP1CA-201ENST00000312989 TMOD3Q9NYL9 352 aa19.77■□□□□ 0.76
PPP1CA-201ENST00000312989 SMARCC1Q92922 1105 aaPredicted RBP19.76■□□□□ 0.75
PPP1CA-201ENST00000312989 SLC4A9Q96Q91 983 aa19.76■□□□□ 0.75
PPP1CA-201ENST00000312989 ATF5Q9Y2D1 282 aaPredicted RBP19.76■□□□□ 0.75
PPP1CA-201ENST00000312989 COL24A1Q17RW2 1714 aa19.76■□□□□ 0.75
PPP1CA-201ENST00000312989 KAT6BQ8WYB5 2073 aa19.75■□□□□ 0.75
PPP1CA-201ENST00000312989 ITPK1Q13572 414 aa19.75■□□□□ 0.75
PPP1CA-201ENST00000312989 ADAMTS7Q9UKP4 1686 aa19.75■□□□□ 0.75
PPP1CA-201ENST00000312989 MRC1P22897 1456 aa19.74■□□□□ 0.75
PPP1CA-201ENST00000312989 LOC102724428A0A0B4J2F2 783 aa19.74■□□□□ 0.75
PPP1CA-201ENST00000312989 HSP90AB1P08238 724 aaKnown RBP19.74■□□□□ 0.75
PPP1CA-201ENST00000312989 SIK1P57059 783 aa19.74■□□□□ 0.75
PPP1CA-201ENST00000312989 TAF1LQ8IZX4 1826 aa19.74■□□□□ 0.75
PPP1CA-201ENST00000312989 C4BP0C0L5 1744 aa19.74■□□□□ 0.75
PPP1CA-201ENST00000312989 MTHFSDQ2M296 383 aaKnown RBP19.73■□□□□ 0.75
PPP1CA-201ENST00000312989 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
PPP1CA-201ENST00000312989 COL23A1Q86Y22 540 aaPredicted RBP19.72■□□□□ 0.75
PPP1CA-201ENST00000312989 TFCP2L1Q9NZI6 479 aa19.72■□□□□ 0.75
PPP1CA-201ENST00000312989 AKAP4Q5JQC9 854 aa19.71■□□□□ 0.75
PPP1CA-201ENST00000312989 SLC16A10Q8TF71 515 aa19.7■□□□□ 0.74
PPP1CA-201ENST00000312989 LGR6Q9HBX8 967 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms